Clupea harengus (Atlantic herring): 105905061
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Entry
105905061 CDS
T09045
Symbol
heatr5a
Name
(RefSeq) HEAT repeat-containing protein 5A isoform X1
KO
K24814
HEAT repeat-containing protein 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105905061 (heatr5a)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
105905061 (heatr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
UTP20_C
HEAT
Motif
Other DBs
NCBI-GeneID:
105905061
NCBI-ProteinID:
XP_031435781
Ensembl:
ENSCHAG00000011033
UniProt:
A0A6P8GK39
LinkDB
All DBs
Position
14:6059570..6089441
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AA seq
2044 aa
AA seq
DB search
MEQAQTLLLNEEACGQLGEHQRAEFVYEWLRFLKKLLPTTDRADVKQKQKRLVEQLQGVL
TGSPGPPTRRLLAQCLALVYRYGDSLSAPLALDRCSDIIRSKDDSPSALPTRLAAIASVG
ALYEQLGRLLISSFRESVGTLLKAVKSAESQGRYEIMLSMERILRGLGVSAVPCHRDIYK
TARACLTDRSMAVRCATAKCLLELQREAVFLWSSELESMATLCFRAFEGSSYDVRVAVSK
LLGTLLASALEPKQPVAPRPGGRRMCLEEVMELLSVGFLRGGVGFLRASGDMLKGCSSVS
RDIRVGITQACVVFVSALGGAWLELNFPSLLALLLALASHPRATQTPSDGACTRRCVSFV
LRSTLGTLLGEKAQVAAAKEICRAIRPQKKASEACVAEVNPEVYLNQHVLVCALLELGSL
IQGLGSTATPLVQDSSIGLLDSVISVLFHPSASARLAAAWCLRCVAVAMPAQAAVLLDRC
AERLTALKSCPEAVAGYSAAVAALLGALQHCPLGIPHSRGKMVLELSEDLLRSATQNSRI
SMQRAQGGWLLLAALNTLGPAVVGDLLGRQLLLLRCAFPPSVRELEAELRRGDCFTWQVT
LDGRAGALSALKSLVSFCGELLTDEVWARLQTPLSCAVALLNHLPTVVKSYGNQVKNAAT
LYRLRVYEILVLLPPETYTEGLGSLLRQLVCELTGENPSCCGLLLLPPLCHPTDLTLTGS
TTLDTDQRYIEQQLQSGSLGIGTLEYDPFSIFQSSQEVPAPVPAATALTNATIQLFGVIF
PQLATPHRAQTLEQLGEALRQLKGARQQTAHILVTSALCCALKALGSARAGLGGEEVCKP
ARSLLWGALESPNGLLRCVAAEGSGRLVQAVNDPAFTASMTMASVDKLKAARDAVSRAGH
ALCLAALQRYSGGISSSQQLGTSVGVLFPLAQDTSAPELQTWSVHALSVLMDLSGPLYRT
HVEPSLSLVLRLLLSSPHTHTHTEMHLSLALCLHQLITAVGPDLQEESDGVCTLRSVCLM
ACAVLQDSQECLLQAQAISCLQQLHLFAPKHLNLAQLVPSLCESLLDYSVLVNMCSSYLW
LRRAVVACLRQLAQREAIEVCEHAVTLVKELPRRDNTQLDVTIKEVGLEGALFCLLDREW
DPRLCQDIRETLGHMLSSAATGKLAHWLKLCKDVLLASADSTAVAVQEPQQEDDGDRDDD
ASVFHARAESGGPFCSLRWATRVFAVECVCRVVALCESADPAHFDMALAQERRLQESTDF
LVLHLADLIRMAFVAATDHSQQLRLAGLQTLLLIIRKFASVPEPEFPGHGILEQYQANVG
AALRPAFTADAPPDVTAKACQVCSAWISSGVVSELKDVRRVHELLVSSLQRVQGGREVPS
LLYNEGTAAMETLAVLKAWAEVYIVAVQTAGRSDATEAEGDTDEGSEGGGGAEEPPADAN
LLRFVQTDLPTLSRLWLAALQDHALLTLPSKYGQQLPPSGGTFYTAETLEQARPHYCSSW
APILHASALWLNSTGFILADDGPANLSRPVTPTSMGQSASLSSVKSPEDINTERLHLILG
ISVEFLCSPHSQDQMENITSCLQALQALLDVPWPRAKVGNDQALSVELLTVLHRLMVTRE
SVEVQLAVLQLVRQVVCAAQEHVREKRHSAEVDDGAAEKETLPEFGEGRDTGGLVPGHSL
VFGALELCLCVLLRKLPQLSPRLARGSPLLGQGPPGVPAGLATPLDASDCGLVAAALAIL
SELPSICSPEGSVCVLPTVLYLLVGVLCELVRGVGGPDGGPLVSGALQALRSVLSTPLSR
VEKSREAWSHLLRCALQTLLDCGDTGKEALTDEVTLLTALTIFLLGASPEVTSAEPLQTR
LIQRFKTDLQVKDPTVLRQSFELLTSVFQSPAGASGSFMQALGAAVVGYLRGVENRRPQT
QEELQAVQEGARALEALAEAAEEMHRPQLVSVLLPVLISFLLDENALASAAGPSRSLHAW
ALQELMRLGPQHPSVLRGLMASAPAMKARLEAAIKGSQERVSSKSNPQAPSKSSPSIQLK
TNFL
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcccaaacgctgctcctcaacgaggaggcctgcggccagcttggggagcac
cagcgtgctgagtttgtgtacgagtggctgcgcttcctcaagaagctgcttcccaccaca
gaccgggcggacgtgaaacagaagcagaagcgtctggtggagcagctccagggcgtgttg
acgggctccccgggcccccccacgcgccggctgttagcccagtgcttggctctggtgtac
cgctacggagactcgcttagcgcgccgctggccttggaccgctgcagcgacatcatccgc
agcaaggacgactcgcccagtgcactgcctacccgccttgcggccatcgccagtgtggga
gcgctgtatgagcagctgggtcgcctcctcatcagctcgtttagagagtcagtggggacc
ctcttaaaagccgtgaagagtgctgagtctcaggggcggtatgagatcatgctgagcatg
gagaggatcctgaggggcctgggtgtgagcgccgtgccctgccacagggacatctacaag
acggctcgcgcctgcctcaccgaccgctccatggccgtccgctgcgccaccgctaagtgc
ctgctggagctgcagagggaggccgtgttcctgtggagctcggagctggagagcatggcc
acgctttgcttccgggctttcgagggctccagctatgacgtgcgcgtggccgtctccaag
ctgctgggcacgctgctggcctccgctctggaacccaaacagcccgtcgcaccccgtcca
ggagggaggcgtatgtgtctggaggaggtgatggagctcctttcagtggggttcctgaga
gggggggtggggttcctgcgtgccagcggcgacatgctgaaggggtgcagctccgtcagc
agagacatccgtgtgggcatcactcaggcatgtgtggtgtttgtctctgcactgggcgga
gcctggctggagctgaacttcccctctctgctggccctgctgttggcgttggcgtcgcac
ccgcgcgccacccagacccccagcgatggcgcctgcacccgccgctgcgtctccttcgtg
ctgcgcagcacgcttggcacgctgctcggggagaaggcccaggtcgccgccgccaaggag
atctgccgtgccatcagaccccagaagaaggcctcagaagcgtgcgtagcagaggttaac
ccagaggtgtatttgaatcagcacgtactggtgtgtgccctgctggaactgggcagcctc
attcaaggactgggctccactgccacgccactggtgcaggactccagcataggtctcttg
gattctgtgatctcggtgctgttccatcccagtgcgtctgcccgattggcggctgcctgg
tgcctgcgttgtgttgccgtggcgatgccagctcaggcggcggtacttttggatcgctgt
gccgagaggctgactgcgctgaagtcctgcccggaggcggtggcaggctatagtgctgct
gtcgccgccctgctgggggctctgcagcactgtcctctgggaataccccacagcaggggg
aagatggtgctggagctatcagaggacctcctgcgctccgccacccagaacagccgcatc
tccatgcagagggctcagggaggctggctgctgctggccgccctcaacacgctgggccct
gcagtagtgggggatctgttgggacggcagctgctgctcctcaggtgtgccttcccccca
tccgtgcgtgagctggaggcggagctccggcgtggagactgcttcacctggcaggtgacg
ctggatggccgggctggagctctgagcgctctgaagagtctggtgtcattctgtggagag
cttctgactgatgaggtgtgggctcgcctgcagacgcccctgtcctgtgctgtcgctctg
ctcaaccacttgcccacagtggtgaagtcctacggcaaccaggtcaagaatgctgctacg
ctctacagactccgagtgtatgagatccttgtgctgctgccccctgagacttacacagag
ggtctgggctccctgttgaggcagctggtgtgtgagctgacgggagagaacccgtcctgc
tgcgggctgctcctgctgccccccctctgccaccccactgacctcaccctcaccggcagc
accacactcgacaccgaccagcgctacattgagcagcagctccagagtggcagccttggc
ataggcacactagagtacgaccccttctcaatcttccagagctctcaggaggtgcctgca
cctgtgccagccgccactgccctcaccaacgccaccatccagctgtttggcgtcatcttc
cctcagctggccaccccacacagggctcagacactggagcagctgggtgaggccctacgg
cagctcaagggagcccggcagcagacagcacacatcctcgtgacctctgccctctgctgt
gccctcaaggctttgggcagtgctcgtgcaggcctggggggagaggaggtgtgtaaacct
gcacgctctctcctgtggggggcgctggagagccctaatgggctgctgcgctgcgtagcc
gccgagggatccggccgactggtgcaggccgtcaacgacccggcctttactgcctctatg
acaatggccagcgtcgacaagctgaaagcggcgcgggacgccgtatctcgggcggggcac
gctctctgtctggccgcgctgcagcgctacagcgggggcattagctcctcccagcagctc
ggcacctctgtgggggtcctgttccccctcgcccaggacaccagcgcacctgagctacag
acatggtcggtccatgctctgtctgtgctgatggacctgtcggggcctctgtaccgcact
cacgtggagcccagcctgtctctggtgctgcggctgctcctgtcctccccacacactcac
acacacacagagatgcacctcagcctggccctctgcctccaccagctgatcaccgcagtc
gggccggacctacaggaggagagcgacggggtgtgcaccctgcggagtgtgtgtctgatg
gcgtgtgcggtgctgcaggacagccaggagtgtctgctgcaggctcaggccatctcctgc
ctgcagcagctgcacctcttcgcccccaaacacctcaacctggcccagctggtgcccagc
ctgtgtgagtcgttgttggattactcagttttggtgaatatgtgcagctcgtatctgtgg
cttcggcgagctgtggtggcgtgcttgaggcagcttgcccagcgggaggcgatagaggtg
tgtgagcacgcagtcaccctggtcaaggagctgccacgccgtgacaacacacagcttgat
gtgaccattaaagaggttggcctggagggggcgctcttctgcctgctggaccgtgagtgg
gacccgcggctgtgccaggacatccgggagacgctaggccacatgctgagctcggcagcc
acgggcaagctggcgcactggctcaaactctgcaaagacgtcctgctggcatcagcagac
agcacagctgttgctgtgcaggagccccagcaggaggacgatggtgaccgtgacgacgac
gcctctgtgttccacgcccgggcggagtccggcgggccgttctgcagcctgcgttgggcc
acgcgcgtcttcgccgtggagtgtgtgtgccgcgtcgtggcgctgtgtgagagcgccgat
ccagcacactttgacatggccctcgcccaggagcgccgtctgcaagagtccacagacttc
ctggtgctgcacctggcagacctgatccgcatggccttcgtggcggccacagaccacagt
cagcagctccggctggctggcctgcagaccctcctgctcatcatccgcaagttcgccagc
gtgcctgagcccgagtttcccggacacggcatcctggagcagtaccaggccaatgtggga
gctgccctcagaccagccttcactgctgatgcccctcctgatgtgacagcgaaagcctgc
caggtgtgcagtgcgtggatctccagcggggtggtgagcgagctgaaggatgtgcggcgg
gtccatgagctgctggtctcctccctccagagggtacaggggggccgcgaggtgcccagt
ctgctctacaacgagggcacggctgccatggaaacactcgccgtgctgaaggcctgggca
gaggtctacattgtggccgtacagaccgccggccggagcgacgccacagaggccgagggc
gacaccgacgagggcagtgaaggaggaggaggagcggaagagccgccggcggacgccaac
ctgctaaggttcgtgcagacggacctgcccaccctgagccgcctgtggctggccgcgctg
caggaccacgcgctcctcaccctcccgtcgaagtacggccagcagctgcccccctcaggc
ggcacgttctacacggcggagactctcgagcaggcgcgtccgcactactgcagctcgtgg
gcgcccatcctgcacgccagcgccctctggctcaacagcacgggcttcatcctggcagac
gacggccccgccaacctgtcccgccccgtcacgcccacctccatgggccagtccgcctcg
ctgagcagcgtcaagtccccggaggacatcaacaccgagcgcctgcacctcatactgggt
atcagtgtggagttcctttgctcgccacactcccaagatcagatggagaacatcacgtcc
tgcctgcaggcgctgcaggccctgctagatgtgccctggccccgcgctaaagtgggcaac
gatcaggccctgagcgtggagctgttgacagtgttgcacaggctgatggtgacgcgggag
tcggtggaggtgcagctggccgtgctgcagctggtcaggcaggtggtgtgtgccgcccag
gagcacgtcagggagaaacgccacagcgctgaggtggatgacggggcggccgagaaggag
acgctgcctgagtttggagagggccgtgacacggggggcctggtgccgggccactcgctg
gtgttcggggccctggagctgtgcctctgtgtgctgctgagaaagctgccccagctcagt
ccccgcctggcccgagggagccccctgttggggcaggggcccccgggggtccctgcaggg
ctcgccactccccttgatgccagcgactgcgggctggtggcagcagctctggctattctg
tcagaactgccctccatctgctccccagagggcagtgtgtgtgtgctgcccacggtgctg
tacctgctggtgggggtgctgtgtgagctggtgcgaggtgtcgggggcccggacgggggc
ccgctggtctcgggggccctccaggcgctccgcagtgtcctgtctaccccactgagccgc
gtcgagaagagcagagaagcctggagccacctgctgcgctgcgctctgcagactctactg
gactgtggggacacaggtaaagaggcgttgactgatgaggtgaccctgctgacggccctc
accatcttcctgctgggggcgagcccagaggtcacgtcagccgagccgctgcagacgcgc
ctcatccagcgcttcaagactgacctacaggtcaaagaccccacggtcctgaggcaaagc
ttcgagctgctgacctccgtgttccagagcccggctggggcatcagggtccttcatgcag
gccctgggggcagcagtggtgggctacctgcgcggggtggagaaccggaggccccagacg
caggaggagctccaggccgtccaggagggggccagagcgttggaggcgttggcggaggca
gcagaggagatgcaccgcccccagctggtgtcggtgctgctgcccgtcctcatcagcttc
ctgctggacgaaaacgcactggcgtcggccgctgggccctcgcgctcgctgcacgcctgg
gccctgcaggagctcatgcggctggggccccagcacccctccgtcctgcggggcctcatg
gcctctgcgcccgccatgaaggcccgtctggaggcggccatcaagggcagccaggagcgt
gtgagctccaagagcaacccacaggcacccagcaagagctcgcccagcatccagcttaag
accaacttcctgtga
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