Clupea harengus (Atlantic herring): 105905068
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Entry
105905068 CDS
T09045
Symbol
khdrbs1a
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1a
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105905068 (khdrbs1a)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105905068 (khdrbs1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
Motif
Other DBs
NCBI-GeneID:
105905068
NCBI-ProteinID:
XP_012688501
Ensembl:
ENSCHAG00000017880
UniProt:
A0A6P3W534
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Position
14:6977706..6983863
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AA seq
397 aa
AA seq
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MDTTPKDTRKVKKPKMEDESKYLPELLAEKDSLDASFTHAMKLLNEEIERIQKGEPKKEA
ETYLDLFSTKNVRVKERVLIPIKQYPRFNFVGKILGPQGNTIKRLQEETGAKISVLGRGS
MRDKNKEEELRKGGEPKYAHLAMELHVFIEVYAPIPEAYLRMAHAMEEVKKFLVPVDNVE
DIHQEQFMEMGYLNGNQDQGGRGRGGPPGRGRGAPPPQMSVPRGRGMLQRGAGPRGGAQR
GGPGRGGAVRGAPSGRGGPPPSAPPGRGGAATRARPSAPPPQRMLPSSALSHQHQHQQQQ
PQHQHQHPAAPESYEEYPYEETYPEGAYEGYEYSHYSQPPQAETEYYDYGHGEAQETYES
YAEDDWEGGWAAGGGGKPAAGRQNKNAPRAHPYSRPF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggataccacaccaaaggatactcgcaaagttaaaaagcctaaaatggaggacgagagc
aaatatcttccagagcttctggctgagaaagatagtctcgatgcatcttttacccacgca
atgaaacttctaaatgaagaaatcgaaaggatccagaaaggcgagcccaagaaagaagct
gagacctaccttgacctctttagcacaaagaatgttcgggtaaaggagagggtgttgatc
ccgataaagcagtacccacgcttcaacttcgttggaaagatcttgggacctcaggggaac
accatcaaacgccttcaggaggaaactggagcaaagatctccgtccttgggagaggatcc
atgagggacaagaataaggaggaagagcttaggaagggaggagagcccaaatatgctcat
ctggcgatggagttgcacgtgttcattgaagtgtacgctcctattcctgaggcctacctg
cgcatggcccatgctatggaggaggtcaaaaagttcttggttcctgtcgataatgtcgag
gacatccaccaggagcagttcatggagatgggctacttgaatggcaaccaggaccaagga
ggcagaggccgtggaggcccaccaggcagggggaggggagcccctccaccccaaatgtct
gtgcccaggggccgagggatgcttcaacgtggagcaggtccccgcggtggcgcgcagcga
ggtgggcccggtcgaggcggagctgtacggggagctccttctggccgaggcggacctcca
ccctctgcacccccaggcagagggggcgctgccacgcgggcaaggccctctgcacccccg
ccccagaggatgcttccctcctctgcgctctctcatcagcaccagcaccaacagcagcag
ccccagcatcagcaccaacatcctgcagcccctgagtcctatgaggaatatccgtatgaa
gaaacctaccccgagggtgcttacgaaggctatgagtacagccactatagccagcctccc
caagcagagacggagtactatgactacggacatggagaagcgcaggaaacctacgagtct
tatgctgaggatgactgggagggaggatgggctgcaggtggaggtggtaaacctgccgct
ggccgacagaataagaacgcccctcgcgcccatccctactcacgacctttctga
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