Clupea harengus (Atlantic herring): 105905082
Help
Entry
105905082 CDS
T09045
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105905082 (hip1rb)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
105905082 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
105905082
NCBI-ProteinID:
XP_042564287
UniProt:
A0A8M1KK90
LinkDB
All DBs
Position
7:complement(30077173..30134252)
Genome browser
AA seq
1079 aa
AA seq
DB search
MNSIRQVPSRVKSKRTETHLGAEREHFERQQLSSISKAITSTETPVKEKHARRIILGTHR
EKGAFTFWSYAVGIPRHSNAILSWKFCHVLHKVLRDGHPNSLQDCMRHHSNIVETGAMWG
NQRDRHGYAQLVSQYSKLLCTKMEFHTKVRAPPTYRLQAPLLFRGVGGDMNSWFQLTVEV
FDYMDAELRVAEAVLRQLNTSIAISTMTSGQCRLAPLIQVIQDCSHLYHYSVKLLFKLHA
CLPADTLQGHRDRFLDQFHSLKTFFNKARDMIFFKRLIQIPRLPDSPPNFLRASALAEHV
KPMVVIPDEEEPEEAEEDEPETLIDVSEAPPPSMAAQPQVDIFDQAFGPPNNGFDDRDLQ
IESLRREIELLRAELEKIKGEAQRYVTQLKSQINSLEAELEEQRVQKQRALLENEQLRME
LEATRRRNAEHEGLQSVFTEAEKKAQSTEERYNKLKEKHVELVSHHAELLRKSADTVKIL
SATQQTQEEVERTKQQLAFEVERVRQEADMKLEEQKFEMDKLRRECEEKNTEMARIKSTM
ETNTKADQERSTSLVSLQAEKERLMRSVSEKEAELSAVRHAHQQKESALQQDRERSTQEM
DQLHSKLKEKLTREEQLQQKLLEEQYSLLQGTVTEAESIIQDALAKLDDPLHIRCTSSPD
YLVSRAEATLGSIDKVKAGHADYVKNMSDAGGLLRALTQFSHLTADTIINGSATAHTAPI
DHADRLTENCRGCANKSLEFLRDLKSKASLRSADPAAIRVIVQKILMLGQELRPKGADVG
KDELGDLVDKEMSATSAAIEEAVRRIDEMMNQARKDTEGVKLEVNERILFSCTDLMKAIR
MLVEASTELQKEIVEGGRGAASEKEFYARNSRWTEGLISAAKAVGWGATQMVDSADKVVL
HTGKYEELIVCSHEIAASTAQLVAASKVKADRNSKKLSTLQVASRQVNEMAAKVVASTKT
GQEQVEVKDTMDFSGLSLIKLKMEEMESQVKVLELESQLENERLRLGELRKKHYVIAGVP
QEDNNGHLRAPSPSPSPRAPSPTPGGAPAPSSPKPSKPSLMKKPPLASKPTIAPKSAFR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccctcgcgggtgaaaagcaaaaggacggaaactcatttg
ggagcggaaagagagcactttgaaagacagcagctcagcagcatcagcaaagcaatcacc
tccactgagacgccagtgaaggagaaacatgcccgcaggatcattctgggcacccacagg
gagaagggggcgttcaccttctggtcctacgccgtgggaatccctcgccactccaacgcc
atcctcagctggaagttctgccatgtgctccacaaagtgttacgagacggacaccccaac
agcttacaagactgcatgagacatcacagcaacattgttgaaactggagcaatgtgggga
aaccagcgggatcgccatggctacgctcagctcgtgtcccagtattccaagctcctgtgc
accaagatggagttccacaccaaggtgagagcccctcccacttatcgtctccaagccccc
cttttgtttcggggggtggggggggacatgaactcatggttccagctgactgtggaggtg
tttgactacatggacgcagagctgagggtagcagaagcagtactgcgtcagctgaacaca
tctatcgccatctccacgatgacctcgggtcagtgccgcctggctcccctcatccaggtg
attcaggactgcagccatctgtaccactactccgtcaagctgctgttcaagctccacgcc
tgtttgccagcagatacgctgcaaggccatcgagaccgcttcctggatcagttccacagc
ctgaagactttcttcaacaaggccagagacatgatcttcttcaagaggctcatccagatc
cctcgtctgcctgattcccctcctaacttcctgcgtgcgtcggccctggcggagcacgtg
aagcccatggtggtgatccctgatgaagaggagccggaggaggccgaagaggacgagcct
gaaactctgatcgacgtcagtgaggctccgccccccagcatggctgcacagccccaggtt
gacatatttgaccaggcgttcggcccccccaacaacggcttcgatgaccgggacctgcag
attgaaagcctcagacgggagattgagctgctgagagcagagctggagaagatcaaagga
gaggcccagcgctacgtgacgcagctcaagtctcagatcaacagcctggaggcggagctg
gaggagcagcgggtgcagaaacagcgcgccctgctggagaacgagcagctgcgcatggag
ctggaagccacacgccgccgcaacgcagaacacgagggactgcagagcgtcttcaccgag
gctgagaagaaagcccagtccactgaggagcgatacaacaaactgaaggagaagcatgta
gagctggtgtcccatcatgccgagctgcttaggaagagtgctgatacagtgaagatcctg
tcagccacccagcagactcaggaggaggtggagaggaccaaacagcagctggcttttgaa
gtggagcgtgtacgacaggaggctgacatgaagttggaggagcagaagttcgagatggat
aaacttcgaagggagtgcgaggagaaaaacacagagatggcacgcatcaagagcacgatg
gagaccaacacaaaggcggaccaggagcgcagcacctccttggtgtcgctgcaggcggag
aaggagcgtctgatgcgtagcgtgagcgagaaggaggcggagctatcggccgtgagacac
gcccaccagcagaaggagagcgccctgcagcaggaccgtgaacgcagcacccaggagatg
gaccaactgcacagcaaactcaaggagaagctgactcgagaggagcagctgcagcagaag
ctgctggaggaacagtactccctgctccagggcacggtgaccgaggcggagagcatcatc
caggacgccctggccaagctggacgaccccctacacatccgctgcaccagctcaccagac
tacctggtgagccgagctgaggccacgctgggctccattgataaggtgaaggcgggacat
gccgactacgtgaagaacatgagtgatgccggtggcctactgagagctctgactcagttc
tcccacctcacggcggataccatcatcaacggcagcgccaccgcacacacggcaccgatt
gaccacgccgaccgtctgactgagaactgtaggggttgtgcaaataagagtctggagttc
ctgagggatttgaagtctaaagcctcactgagatctgcggatcctgcagccatacgcgta
atagtgcagaagatcctaatgctgggacaggagctgaggcccaagggggctgacgtgggg
aaggacgagctgggtgatttggtggataaggagatgtctgccacgtctgccgccatcgag
gaggctgttcggcgaatcgatgaaatgatgaaccaagccaggaaggatactgagggggtc
aaactagaggtcaacgagaggatcctgttcagctgcacggacctcatgaaggcgatccgt
atgctggtggaggcctccactgagctgcagaaggagatcgtggaagggggacggggcgct
gcgtcggagaaagagttttacgcccgaaactcccgctggaccgaaggactcatctctgcc
gctaaagctgtgggctggggtgccactcagatggtggactctgctgataaggtggtgttg
cacacagggaagtacgaggagctgatcgtctgctctcatgagatcgctgccagcaccgcc
cagctggtggccgcctcaaaggtgaaagctgaccgcaacagtaagaagctgagcactctc
caggtggccagcaggcaggtgaatgagatggccgctaaggtcgtggcctccaccaaaaca
ggccaggagcaggtggaagtaaaagacactatggacttctctggcttgtccctcatcaaa
ctcaagatggaggagatggagtctcaggtgaaggtcctggagctggagtctcagctggag
aacgagcgcttgcgtttgggcgagctgcgcaagaagcactacgtgatcgcaggggttccc
caggaggataacaacggccacctgcgcgccccctccccctccccctccccgcgcgccccc
tcccccaccccagggggcgcccccgccccctcctcacccaagccctccaagccatccctc
atgaagaagccccccctggccagcaagcccaccatcgcgcccaagagtgcgttcaggtaa
DBGET
integrated database retrieval system
