Clupea harengus (Atlantic herring): 105905291
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Entry
105905291 CDS
T09045
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105905291
03015 mRNA surveillance pathway
105905291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105905291
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105905291
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_ACIN1
RRM_occluded
Nup35_RRM_2
RRM_10
RBD_AKAP-17A
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
105905291
NCBI-ProteinID:
XP_012688749
Ensembl:
ENSCHAG00000000169
UniProt:
A0A6P3W3W1
LinkDB
All DBs
Position
1:complement(3808150..3813570)
Genome browser
AA seq
283 aa
AA seq
DB search
MAPSPTKRKERSEDKPKERGKEKSGTKEGAEKDRGRDKTRKRRSASTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSRSGSSSSSSSSTGTPSPGRRRHDNRRRSRSKSQK
RGEEKERKKRSPSPKPTKVHVGRLTRNVTKEHIQEIFSTYGKIKMVDMPPDRLHPHQSRG
YAYVEFETPEEAQKALKYMDGGQIDGQEISAMAVLTQRARPVPRRVSPPRRMPPPPPMWR
RTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcacccacgaaacggaaagagcggtctgaggataaacccaaggagcgaggc
aaagagaaatctggaactaaggagggtgcagagaaagaccgtggccgagacaagacgcgc
aaacgccgcagtgcatccaccggaagtagcagcagcaggtctcgttcaagctcatcctcc
agcagcagctctggctctagctctggttcctccagcggatcaagttcctcatctggttcc
agccgctctggatccagccgctctggttcctcctcctcttcttcctcttcaacagggact
cctagccccggccgcagacgccatgacaaccgacgcaggtctcgttcaaagtcacagaaa
agaggagaggagaaggaacgaaagaaaagatctccgagccccaaacccaccaaagttcac
gttggacgcctcacccggaacgtcactaaggaacacatccaggagattttctctacttat
gggaagataaagatggtggatatgcctccagaccgactccacccccaccagtcacgaggc
tatgcctatgtggagtttgaaaccccagaggaggctcagaaagccctcaagtacatggat
ggaggtcagattgatggacaggagatctccgccatggctgtattgacgcagcgtgctcgc
cctgtcccacgacgcgtctcgcccccgcgcagaatgcctccacccccacccatgtggcgc
cgcacgcccccccgcatgaggcgaagatcccggtccccacgccgacgatcccctgttcgc
aggcgttcccgttccagatctcccggccgcagacgacatcgctcccgttccagctccaac
tcctctcggtag
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integrated database retrieval system
