Clupea harengus (Atlantic herring): 105905323
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Entry
105905323 CDS
T09045
Symbol
pogza
Name
(RefSeq) pogo transposable element derived with ZNF domain a isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105905323 (pogza)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105905323 (pogza)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-POGZ
DDE_1
zf-C2H2_Z280C_D
zf-C2H2
zf-C2H2_4
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
105905323
NCBI-ProteinID:
XP_031441749
Ensembl:
ENSCHAG00000001705
UniProt:
A0A6P8GRF9
LinkDB
All DBs
Position
19:complement(8263839..8276476)
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AA seq
1367 aa
AA seq
DB search
MYQRSIEGGAGPENASLGDKLATELVSIGTGLPETMSESSELLMQCDEEDLDPWQQVDDD
ARSERNKLNASKTTKSPSIVSPAASSAAQVPTEGKNAALPIVSATAVPIGQTLVPQILQP
LQVASNITSGVGTPGQPIYITSSTLPVSNSIGTTMGQTIGFILNGQTYLTAGTSHQLIAP
KPPAQTPMQVPVTLTITGPSGIQTVSALATAGVHQLNLTDSDVTPTSSAVMPTSMATVSV
APLGVSSQQYTAPAPVLSPSLHTFPVALANGSTTVSARSTAPPGPLAPPSPAAPSTSTFQ
LRVPSSHSKAAQSCARCRSPYKMVASLRGYMCMCNKVLMKAIQDLEPTKKKDKRYTNPSH
QRFVGSSSKSSKRPPAQSLSSRISQSSSDEEEEEEEEEEDDYEEEEEKGRSMPQEEKTGG
KLIMLVEDFYYGLDRGTDLEKKQPEDAVMFKCHLCEKKLKNNLKMMVHTKHHVESDQKYE
AESQTTCQHCFRNFPSPLSLQSHVERVHSQAESSTKCRICELAYENEPIFLQHMKNSHKP
GEMPYVCQVCGFRSSFYLDVIFHFRDTHSNTTHLLCPYCLKVFRSSSNYQLHYSRHQKKS
VLHCDKCRLQFLFVKDKAEHKHMYHNTHRKPLQLEGLKPGTRVTIRTYAALSPASISGGG
VSRVIEVPSMPPLIEPWPARQPTPTRSNTPTSHIPEPRTPTRANAANSKFGHMSPPSNIS
PAPLLTPLPSPVPILPRKVPSVSLQDVMTKFEQQKPTLEKGSCVECTFEIPNYSQHYPTY
VHCSICRYSTCCSRSYANHMINNHVSRKTGKLSKYLSMFRPCPRDLSLNCLSCHFTTKVG
DMMANHLVEYPEHCGGTYKARDGFSTGYKRFVIIPNDVLREGETVSLDRQNNPFVQLGAD
SSESAQPANHSSLAIKKPGKTKKPANEVEVPEKSLSVEQLKIVLFALCCGVPQAAAQFQT
QPALIQAWLIARKSQGPSKGRRGLGPRAADRLSEWVLVQREQQLPVNEEKLFQKVKECVG
GSDPGLSHDWAVDFLLQHELGVQTVGTAGRVLPQSVEEGVRSFTRFIKKQVGAQGFGLGS
VGAVDELAVFIDLEQLDQASSLASVFQLSDPGEPIMEVVLSAMADGTLLPAMVFLTGNPP
SCMAAVPASVFLEARPEGFSDEDRLQLWLSKVWRPYINPSAGGKGLLVMDPYRGHLADDF
LASLNSANTLPAVVPKACSCCLQPLEACTGPVLREFLQACWSEQVATAPESLIGAQPDEL
ALLVIGWLAQLLQVLGARPELLQRSFKMAAEPLETQAGEGPMGLVQELTRALLQSTPQET
EGEGEDDQAATPGSWPSPSSRQKLKQVFEKDSDLESFHGFEEADMGK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaacgctccatagagggaggagctggcccagagaacgcgagtttgggtgacaag
ttagctactgagctagttagcataggaacaggtctgccggaaaccatgtctgagtcctct
gaacttttgatgcagtgtgatgaggaggaccttgacccatggcaacaggtcgatgatgat
gccaggagtgaaaggaataaattaaatgccagtaaaaccactaaatcaccatcaatcgtg
tcgcctgcagcatcatctgcagcacaagtgccaacagagggcaagaatgctgccttgccc
attgtcagtgccacagctgttcctattggccagacgttagtgcctcagattctgcaaccg
ctccaagtggcatctaatatcacatcaggtgttggcacaccaggccagcctatctatatc
acctcatcgactcttcccgtatcgaactcaattggtacaactatggggcagacgattggg
ttcatcttgaatggtcaaacctatctgactgctggaacaagccaccagttgatcgcgccc
aagccaccagcacagaccccaatgcaggtgccagtaactctcaccatcacagggccatca
gggatacagactgtcagtgccctggccacagctggtgtccaccaactcaaccttaccgac
tcagacgttaccccgacatcctcggctgtcatgccaactagtatggccactgtgtcagta
gctcctcttggtgtttccagtcagcagtacaccgctcctgcgcctgtgctaagtcctagt
ctacatacattccctgttgccttggcaaacggctcaactacggttagtgcacggagcacc
gcccctcctggtcccctggctccgccctctcctgcagctccgagcaccagtacctttcag
cttagagtaccttcaagtcactccaaagcagcacagtcttgtgcacggtgcagatcccca
tataagatggttgcctctctgcgtgggtacatgtgtatgtgtaacaaggtcctcatgaag
gccatacaagacctcgagcccacgaagaagaaggacaaacgctacactaacccctcacac
caaaggtttgtgggctcttcctccaaatcctctaaaagacctccggcccaatcactctct
tccaggatctcccagagctcctcggatgaggaggaggaggaggaggaggaggaagaagat
gattatgaagaagaagaagaaaagggcagatccatgcctcaagaagaaaagacggggggt
aaactgatcatgctggtggaggatttctattatggcttggaccgtggtacagacttggag
aagaagcagccagaggatgctgtgatgttcaagtgccacctgtgcgagaagaagctcaag
aataatctgaagatgatggtccacacaaaacatcatgtagagtcggaccagaagtatgaa
gcagagtcccagaccacctgccagcactgtttccggaactttccctcgcctctgagcctg
cagtcgcatgtggagagagtgcatagccaagcagagtcttccactaagtgtaggatctgt
gagttggcctatgagaacgagccaatcttcctgcaacacatgaagaattctcacaaaccc
ggagagatgccatatgtctgccaagtatgtggatttcgttcctctttctacctggatgtc
atcttccacttccgcgatacccatagcaacacgacccacttgctctgcccctactgcttg
aaggtgttccgctccagcagtaactatcagctgcactacagccgccaccagaaaaagtct
gtgttgcattgtgataaatgccggttgcagttcctcttcgtgaaggataaggctgagcac
aagcacatgtaccacaacacgcaccgcaagccgcttcaacttgaggggctgaagcctggt
accagggtgacaatccgcacttatgctgccctgtcgccagcatcaatcagtggtggcggt
gtgtctcgggtgatcgaggtgccatcaatgccccctctaattgagccatggcccgccaga
cagcctacacccacccgctctaacacccccacgtcccacatcccagaaccccgtacgcca
acccgagcaaatgctgccaactccaagtttggccacatgtcccctcccagtaacatcagc
ccagccccccttctaactccccttcccagtcccgttcccatccttcccaggaaggtcccc
agtgtgagtctgcaggacgtgatgactaagttcgagcagcagaagcccacattggaaaag
ggtagctgcgtggaatgcacctttgagattccaaactatagccagcattaccccacctat
gtgcactgctcaatctgccgctacagcacctgctgttcccgctcctacgccaaccacatg
atcaacaaccacgtttctcgcaagactggaaaattaagcaagtacctgtccatgtttagg
ccatgtccaagggatctatcattgaactgcctgtcctgtcattttaccactaaagtgggt
gacatgatggccaaccatctggtggagtatcctgaacattgtggaggcacctacaaagct
agggatggattctcaacaggatacaaaaggtttgtcatcataccaaatgatgtgcttcgg
gaaggagagacggttagtcttgatcggcagaacaatccctttgtccaactgggggcggat
agttctgaaagtgcccagccagccaatcacagctctcttgccatcaaaaagcctggaaag
accaagaagccagccaatgaggtggaagtccctgagaagtctctttctgtggagcagttg
aagattgtgctgtttgccctgtgctgcggagtaccccaggctgctgcacagttccaaacc
cagccggcactcattcaagcctggctaattgcccgcaagagtcaggggccaagcaagggc
cgtcgcgggcttgggcccagagcagctgaccggctgtctgagtgggttctggtgcagcgg
gaacagcagcttcctgtgaacgaagagaaactgttccagaaggtgaaggagtgtgtgggt
ggtagtgacccagggttgtcccatgactgggcggtggacttcctgctgcagcatgagctg
ggcgtgcagacggtcggcacggcagggcgtgtgcttccgcagagtgtggaggaaggtgtg
cgctcattcacacgcttcataaagaagcaggtcggtgcccagggctttgggcttggtagt
gttggagctgtagatgagctggctgtgtttattgatctggaacagttggaccaggcttcg
tcccttgcttctgtgtttcaactgtcggaccctggtgagcctataatggaggtggtcttg
tcagcgatggccgatggaacgttactccctgcaatggtgttcctgacgggtaacccacca
tcttgcatggcagctgttcctgcctccgtctttctcgaggctcgaccagaaggtttctca
gacgaggaccgtctgcagctgtggctttccaaggtgtggcgcccgtacatcaaccccagc
gcggggggaaagggcctactggtgatggatccctaccgagggcacctggctgatgacttc
ctggcttcactgaacagtgccaacactctgccagccgtggtgcccaaggcctgctcctgc
tgcctgcagcctctggaggcgtgcaccggcccggtgctcagagagttcctgcaggcctgc
tggagtgaacaagtggccaccgctcccgagagcctcataggggcgcagccggacgagttg
gctcttctggtgattggatggttggcgcagttgcttcaggtgctgggggctcgtccagag
ctgctgcagcggtcttttaaaatggcggcggaacctttggagacacaggctggggaaggg
cccatgggtctggtgcaagagttgaccagggcgctcctccagtccactccgcaggagact
gagggcgaaggggaagatgatcaagcagccacgcctggatcctggccatcgccttccagc
cgacagaagctcaaacaggtgtttgagaaagacagcgacctggaatctttccatggcttc
gaggaggcagacatgggaaaataa
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