Clupea harengus (Atlantic herring): 105905331
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Entry
105905331 CDS
T09045
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
char03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105905331 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105905331 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105905331 (nup153)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105905331 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
105905331
NCBI-ProteinID:
XP_031442004
Ensembl:
ENSCHAG00000002183
UniProt:
A0A6P8GS63
LinkDB
All DBs
Position
19:8324131..8345808
Genome browser
AA seq
1502 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQAGIISRVTDTVKSIVPSWLQKYFRNGEVAEDGA
ATRLAPELDSQDPPPNGHEEGAPLPDGRDSPEPSTSNTEPSTSRASLNFQDVLSRPPLNR
SHLHFASLDGSPALAGRSSSLFPQPSTSTAAPFGSPFGGPFAGASTSNFSLVKEIKDSIS
QHEDDNISTTSGFSSRASDKDVPTSKPAPLLWSPETDRTHSGTQPAQAGLKKPAFNLSVF
GTSGLSTTMNSSVLNSSHLGDSPFYPGKTTYGGAAANRSARSRPSTPYQVPVRRMIKAKP
AGTQPCGVTSATARRILQSLERMSSPLADAKRIPSTISSPLSRSLDRTDLDASPFQIKKK
KMDPLLPPVQKLVVPSAASVSGNRSMAFRPSLTPGGVNRTLERTAARDTPVRRSPLIPEP
TPTTSQSTTSLAYPLSSTPAVSAAGSGGGKMKRERSIRPSNKHPEDEVAEVPDLPAISLP
ISSRALPSFSFSSPSTTSTPTSAPAKTTPTPAPAKTTPAPAKTVTSKDPPPASSPPSLPF
TFASPIVMATAASPPSFSPSSGFTFSAPVMKTSPSVSNDTAAASPIARSVKSTANAETKE
EFEGPFKPAKTLKQGSVLDLLKAPGFSSSPPTSTPSSQPAPTLPLSGFGDKFKPAAGSWA
CDSCLLQNSAADTKCVACQTTKPQTNSSSSSSSSSKLDSKPPAVSMAASSGGLAALFAPP
AGSWDCDTCLVQNKPDALKCVACETAKPGSGIKPGLTLPAFSAASSTSTAATAAATTTSS
STSAGLLGFGDKFKKPEGSWDCDTCMVQNKGPDTKCVACLSPKPGASGAAPASLPPLSSS
SGSAAPSLGFGDKFKKPAGSWECDVCCVQNKGEDVQCVACQTNKPGAKIESKAALGSATF
TDSSSGGFKFGSSGTSATSDGIKFAGTFSDSSSAPSGGGFKFGGAPSDSTGGFKFGGASD
SSSGGFKFGNSTTSEVSSTASGTSSGGFTFDLTSSSSSTTEDSKKADAPSLGNGFKFGGS
TITFGTASTAPAAEASAAPVSAPAVDPSATGFSFGLSKPEDKLSAAPSPTFSFSTPQDAP
AISNSVTSASSTSLPIFGTLAGAELTTSTPSLLPAATKFGESVSKEPALSGPVFSFGNPE
EKEASSTSTTTAGFLFGAAKEAEKAPITTAAPSGGFSFGKPEAAAEPKPIFAFGKPAEKS
EVDAPKPAFSFGQTSTDSSAAKPAFGFMAAATSSTPSSTPPPHPSLFGAVASSTTTLAPS
PVPAPVPAPTSTFMFGQSTATTDAPPAKAFLFGQQTQETPAAPSATPAQPFMFNSAGNTA
APSFAFGATSSSTAAPAAPPPFAFSPASSTTGFGSTQSSMFGQNASQPIAPAFGSAAPSF
SAGSQAPAFGAKPTAAPVFGQPANATPAFGSSNASTGQGGGFAFGGAGAFGPPAGAASGI
FTFGGGPNPAAPATPQPPAPGGGFNFAASPAFNIGSVKSAGTPAPQHGIAGRKIKTAVRR
RK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaggaggagggaaaattagatcaagaagatatcatatcgcttcaaaaccg
tatgctaaaggaaaacagcaggcagggatcatcagcagggtgacggacacagtgaagagc
atcgttccctcttggcttcagaagtacttcaggaacggagaggtggcagaggacggagct
gccacgcgactcgccccagagctcgacagccaggatccgccccctaacgggcacgaggag
ggtgcccctctgccagacggccgcgactcacctgagcccagcaccagtaacacagaacct
tctacaagccgtgcgtcgctgaacttccaggatgttctgtcacggccccccctcaaccgc
tcccacctacactttgcttcgctggacggctccccagcgctggctggccgctccagctca
ctgttcccccagccctccacctccaccgccgccccctttgggagcccctttgggggcccc
ttcgcgggggcctccacctccaacttctccctggtgaaggagatcaaggactccatctcg
cagcacgaggatgacaacatctccaccactagtggcttctcatcacgcgcctctgacaaa
gacgtgcccacctcaaagcctgccccgttgctttggtccccagagacggaccgcacgcac
tcgggcacgcagcctgcccaggctggcctcaagaagcccgcctttaacctgtcggtgttt
ggcacctctggtctgtctactacaatgaacagctccgtgctgaactccagtcaccttggc
gactcgcccttctaccctggcaaaaccacctatggaggcgccgccgccaaccgcagtgcc
cgctctcgcccaagcaccccatatcaggtccccgtgaggagaatgataaaggcaaagcca
gctggcactcagccctgcggggtgaccagcgccacagcccgccgcatcctgcagtccttg
gagcgaatgtccagccctctggccgatgcaaaaagaatcccctcaaccatatcgtcacct
ttgtcaaggtcactggatcgcacagacttagacgcttcacccttccagattaagaagaaa
aagatggacccgttgttgccgccggtgcagaagctggtggtgccgtcagctgcctccgtc
tctgggaatcgttccatggccttccgtccctctctcacacctggcggtgtcaatcggaca
ttggagagaacggcagcgagggacacgcctgtgcgaagatctccattaataccggaacct
acaccaaccacgtctcaaagcacaacctctctggcctaccccctgtccagtaccccagcg
gtcagcgctgctggctccggaggaggcaagatgaagcgggagagaagcatcaggccctcc
aacaaacaccctgaggatgaggtagcagaggtccctgacctgcctgccatctccctcccc
atcagctcacgggcactgccctctttcagtttctcctccccatccaccacctccacacca
acgtctgcccctgccaaaactacccctacccctgcccctgccaaaactacccctgcccct
gccaagacagtcaccagcaaggatcctccaccggcctcctcacccccttctctgcccttc
actttcgcttcccctattgtcatggcaacagctgccagccctccatcattctctccatct
tctggtttcaccttcagcgcgccggtcatgaagaccagcccctccgtgtctaatgacact
gctgccgcttctcccatcgcccgctcagttaagagcacggcaaatgctgagaccaaagag
gagtttgagggccccttcaaaccagccaagacccttaagcagggcagtgtgctggatctc
ctgaaggctccaggtttctcttccagcccccccacttcaactccctcctctcagcccgcc
cccaccctccccctctccggctttggggacaagttcaagcctgcagcaggctcctgggcc
tgtgactcctgcctccttcagaactctgcagcggacaccaaatgtgtagcgtgccagacc
accaaaccccagacaaactcttcctcgtcttcatcctcctcctctaaattagacagtaaa
ccccccgcagtttctatggcggcctccagtggaggtctggcggcgctgtttgcccctcca
gcgggctcgtgggactgcgacacctgccttgttcagaacaagccggatgccctgaagtgt
gtggcctgcgaaaccgccaagcctggctccggcattaagcctggtctgaccctgccggct
ttttcagcagcctcctccacatccaccgctgctactgctgctgcgaccacaacctcatcc
tccacctctgctggactgttgggatttggggacaagtttaaaaagccagagggctcgtgg
gattgcgacacgtgcatggtgcagaacaaagggccggacaccaagtgcgtggcctgtctg
agtccaaaaccaggagcatctggagcagcgcccgcctccttgccccctctgtcctcctcc
agtggctctgcagcgccctctcttggctttggggataagttcaagaagccagcaggcagc
tgggaatgtgacgtgtgctgtgtgcagaacaaaggagaagacgtacagtgtgtggcctgc
cagaccaacaagcctggagccaaaatcgagtctaaagccgcactcggttctgcgacgttc
accgattccagctccgggggatttaaattcggctccagcggtacctctgccacctcggat
ggcattaaatttgccggaaccttctcggactcctctagcgcccctagtggtggtggcttc
aagttcggcggtgcaccctcagactccaccgggggcttcaagttcgggggtgcctcagac
tcatcctcaggaggttttaaatttggcaactccacaacctctgaggtgtcctctaccgcc
agtggcacttcgtcagggggcttcacatttgacttaacctcctcatcctcttccaccact
gaagactctaagaaggcggacgctccaagcttaggcaatgggtttaagttcggcggcagc
accataacgtttggcacagcaagcacagcacctgccgccgaagccagcgccgcacccgtc
tctgctcctgcggtcgacccctcggccacaggcttctcttttggcctctctaaaccagaa
gacaaactcagtgctgcccccagccccacctttagtttctccacccctcaggacgccccg
gccatctccaactccgtcacctcggcctcttcaacctcgctccccatctttgggacgctc
gccggggccgagctgaccacctctactccatccttgctccccgctgccacgaagttcggc
gagtctgtgagcaaggagccggcgttgtctgggcccgtcttctcttttgggaaccccgag
gagaaggaggcgtcctccacctctactacgaccgccggattcctcttcggtgctgcgaag
gaggcggagaaggcgcccatcaccactgctgctccctctggcggcttctccttcggcaag
cctgaagcggctgcggagcccaaacctatttttgccttcgggaaacctgcggagaagagc
gaggtggacgcccccaaacccgcgttctcattcggccagactagcacagattcatcagct
gcaaagccagcctttggcttcatggctgcagcgacctccagcacaccctcctccacaccc
cctccacaccccagcctgtttggtgccgtggccagctccaccactaccctggccccgtcc
cctgttcctgcccccgtccctgcccccaccagcaccttcatgtttggccagagcaccgcc
accacggatgcccctccagcgaaggccttccttttcggacagcagacgcaagagacccca
gccgcgccttcggccaccccggcccaacccttcatgttcaactcggcaggcaacacggcc
gctccctctttcgccttcggagcgacgtcttcatctacagcagctcctgcagcccccccg
ccttttgcgtttagccccgcctcctccaccactggctttggctccacgcagtcctccatg
tttggtcaaaatgcgtcgcagccgattgctccggcattcggttcagccgccccctccttt
tccgctggatcccaggcaccagcgtttggcgccaaacccactgcagcacccgtgttcggc
cagccggccaatgccacaccggcgttcggctcctccaatgcatccacaggacaaggtgga
ggtttcgcattcgggggtgccggtgcgtttgggccccccgctggcgccgcctcggggatc
ttcacctttggtggcggaccaaatcccgccgccccggcaactccccaacccccagctccc
ggcgggggcttcaactttgctgcgagccccgccttcaacatagggtcagttaagagtgct
ggcacgcccgctccacaacacggcatcgctgggcgcaagatcaaaacggccgtgaggcgc
aggaagtag
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integrated database retrieval system
