Clupea harengus (Atlantic herring): 105905353
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Entry
105905353 CDS
T09045
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105905353
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
105905353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
DAO
zf-CW
Pyr_redox_2
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
FAD_binding_3
FAD_oxidored
FAD_binding_2
2-Hacid_dh_C
AlaDh_PNT_C
Lycopene_cycl
NAD_binding_9
GIDA
KARI_N
FMO-like
NAD_binding_7
MurD-like_N
Shikimate_DH
zf-RING_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
105905353
NCBI-ProteinID:
XP_012688807
Ensembl:
ENSCHAG00000007035
UniProt:
A0A6P3W4A1
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All DBs
Position
19:8492148..8502595
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AA seq
841 aa
AA seq
DB search
MLSDADYGGNASAGRQRGKKRGAAAEPTSGDSQPMRSTGRQSNVRVRRSSNNSNNPTGQA
KRKATDTDEEDDQSEKKYRKCEKAGCPATYPVCFASASERCAKNGYTSRWYHLSCGEHFC
NECFDHYYRSHKDGYEKYASWKRVWTGNGKSEPSLKAFMADQQLPYWVQCTKPDCGKWRQ
LTKEIQLTPSLVSTYRCGLKVNNVKTEGPDQCSLPEDMRVAGVSDSWWNSMLIVPPLLKD
SPANPFLIAYYPDCVGMSPSASPSNFAHGDLRTERRRVIQPQIPGLCPYFQPFYQPNECG
KALCVRPDMMELDELYEFPEFSRDPTMYLALRNLILAAWHRECKEALTPQKCIPHVTIRG
LVRVRCVQELDRVLHFMTRKGLINTGVLLVKQPTLPEQYHQKKKVLVIGAGASGLAAARQ
LKNFGMQVVVLEAQDRIGGRVWDDQSLGVTVGRGAQIVNGCVNNPIALMCEQLGVKMHKL
GDRCDLLQEGGGTTDPAIDKRMDFHFNAILDVVSEWRKDKSQHQDAPLGEKIQEVYKTFL
QESGIHFSELEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLREGYSS
VLHKLAVGLDIHLKSPVQSIDYFGDVVKVTTTSGSQWTAQKVLVTVPLALLQKGIIQFCP
PLPERKLKAIHSLGAGVIEKIALQFPYRFWDRKVQGADYFGHVPPVPENRGIFSVFYDMD
PKGKQSVLMSVLTGEALATVKDMEDKEVADMCLRVLRELFQDQEVPDYQKFFVTHWSRDA
WAQMSYSFVKTGGSGEAYDIIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKITV
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgacgcagattatggtggcaacgcgtccgctggtcgacaacgggggaaaaag
cgaggagcagcggcagaacccacgtcaggagacagccagcccatgcggtccactggcaga
cagagcaacgtcagggtgaggcgatccagcaacaatagcaacaatcctactggacaggcc
aagaggaaggccacagacacagacgaagaggacgatcagtcagagaaaaagtacaggaaa
tgtgagaaggcaggatgcccagctacctatccagtgtgctttgccagtgcctctgaaagg
tgtgccaaaaatggttacacatcaagatggtaccacctctcctgtggcgagcatttctgc
aatgagtgttttgaccactactatagaagtcacaaagatggctatgagaagtacgcatcc
tggaagagggtgtggactgggaatggtaaaagtgaaccaagtctcaaggctttcatggct
gaccagcaacttccctactgggttcagtgcacaaagccagactgtggcaagtggaggcag
ctcactaaggaaatccagctcaccccatctctggtctccacctaccgctgcggactcaaa
gtcaataacgtcaagactgaaggaccagaccagtgctctcttccagaggacatgcgagtg
gctggagtgagtgacagctggtggaactccatgttgatcgtgcccccgctgctgaaggac
agccccgccaaccctttcctcattgcctactaccctgactgtgtgggcatgagtccctct
gcgtcgcctagcaactttgcccacggtgacctgaggacagaacgcagacgggtgatccag
ccacagattccaggtctgtgtccgtacttccagccgttctaccagcctaacgaatgtggc
aaggctctgtgtgtgcggccagacatgatggagctggacgagctctacgagtttccagaa
ttttctcgtgacccaaccatgtaccttgccctgcgaaacctcatcctggctgcgtggcat
cgagagtgtaaggaagcgcttacgccacagaagtgtatcccccatgtgaccatccgtgga
ctggtgcgggtgcgctgcgtgcaggagctggacagagtcctccacttcatgacccggaag
ggattgattaacacgggagtcttactggtgaagcagcccactctgccagaacagtaccac
caaaagaagaaagtgctggttattggtgctggagcatcaggattggcggcagcgcggcaa
ctcaaaaactttggcatgcaggtggtggttctggaggctcaagaccggattggaggccgc
gtctgggatgaccagtcactaggtgtcactgttggacgaggagcacagatagtcaatggc
tgtgtcaacaaccctattgccctcatgtgtgagcagctgggtgttaagatgcacaagctt
ggggaccgatgtgacctgctgcaggagggaggtggcaccacagacccagccatagacaag
cgcatggacttccacttcaacgccatcctggacgtggtctctgagtggaggaaggacaag
tctcagcatcaggacgcccctctcggagagaagatccaggaggtgtataagaccttcctt
caagagtcaggaatccacttcagtgagctggaggagaaggtgttgcagttccacctcagt
aaccttgagtacgcctgtggcagcacgctagatcaggtgtctgctcggtcatgggatcat
aatgagttctttgcccagttctctggagaccacaccctgctgagggaaggctactcctct
gtgctccacaaactggcagtgggactggacattcacctgaagtccccggttcagtccatt
gactactttggagatgtagtcaaggtcacgactaccagtggctctcagtggactgctcag
aaggtgttggtgaccgtcccactggctctcctccagaagggcatcatccagttctgcccg
ccccttccagagaggaagctgaaggccattcatagcctgggggctggggtcatagagaag
attgccctgcagtttccctatagattctgggaccgtaaagtccaaggggccgactacttc
ggccatgttccaccagtcccggagaacagggggatatttagcgtgttctacgacatggac
ccaaagggtaaacaaagcgtgctgatgtcagtcctcactggagaggcgctggccactgtc
aaagacatggaggacaaagaggtggccgacatgtgcctgagggtcctgagagaactgttc
caggatcaggaggttccagattaccagaagttctttgtgacccactggagtcgagacgcc
tgggcgcagatgtcctacagcttcgtgaagactgggggcagcggcgaggcctacgacatc
atcgcggaggacgtccaggggaaagttttcttcgctggcgaggccaccaacaggcacttt
ccccagaccgtgactggagcctatctcagtggggttcgagaggccagtaaaatcaccgtg
ctctga
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