Clupea harengus (Atlantic herring): 105905426
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Entry
105905426 CDS
T09045
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105905426
03015 mRNA surveillance pathway
105905426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105905426
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105905426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RBD_AKAP-17A
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
105905426
NCBI-ProteinID:
XP_031417054
UniProt:
A0A6P8EXJ4
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All DBs
Position
23:complement(12846368..12852520)
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AA seq
304 aa
AA seq
DB search
MCRLCPHKTSSYGDSDVWQRISIGSISMAPSPTKRKDRSDDKTKERGKEKVSSKDGADKE
RTREKGHKRRSASTGSSSSSSSSSSGSSSGSSSGSSSSSASSRSGSSSSRSSSSSSSTGS
PTPNRRRHDNRRRSRSKSKSVKKDDKDRRRRSPSPRPTKVYLGRLTRNVIKEHIQEIFST
YGKIKMIDMPMDRLHPHLSKGYCYVEFETADEAEKALKHMDGGQIDGQEITATAVLALRV
RPPPRRPSPPRRMPPPPPMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSS
NSSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcggttgtgtccacataagacgtcatcatacggcgacagtgacgtttggcaacgg
atttcgataggttcgataagcatggctccatcgcccaccaagaggaaggatcgctctgac
gataaaaccaaagagcgaggaaaggagaaagtaagcagcaaagacggagcggacaaggag
aggaccagggagaagggtcacaaacgccgcagcgcttccactggcagcagcagttccagt
tccagcagcagctctggctccagctctggctcctccagtggctccagttcatcttcggcc
tccagtcgctctgggtcctccagctcccgctcctccagttcctccagctccactgggtca
cccacccctaaccgtcgtcgccatgacaaccgcagacgttctcgttccaagtccaagtct
gtgaagaaagatgacaaagatcgacgtcgcaggagccccagcccaaggcccactaaggtg
tacctgggccgtctcaccagaaacgtcatcaaggaacacatccaggagatcttctccacc
tatgggaagatcaagatgattgacatgcccatggacagactccacccccacctgtccaag
ggctactgctacgtggagtttgagacggccgacgaggcagagaaggccctcaaacacatg
gatggaggtcagattgatggtcaggagatcaccgccactgctgtgctggccctcagggtg
cgcccaccccctcgccgccccagcccaccccgcaggatgccccctcctccgcccatgtgg
cgccggacccccccacgaatgagaaggaggtcccggtcgcctcggcgacggtctccagtg
cgccgccgttcccgatctcgctcacctggacgaagacgccatcgctctcgttccagctcc
aactcttcgcgatga
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