Clupea harengus (Atlantic herring): 105905441
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Entry
105905441 CDS
T09045
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105905441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105905441
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
105905441
SSDB
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Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
105905441
NCBI-ProteinID:
XP_031414150
Ensembl:
ENSCHAG00000013474
UniProt:
A0A6P8EPY5
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Position
21
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AA seq
581 aa
AA seq
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MAIHVEGLVAIFIFYTLILVVGIWAAWKNKNSGVSEGADRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIIDMNINMSVVVSALIAIFYTLV
GGLYSVAYTDVVQLFCIFVGLWMSVPSALANPAVSDIGVTAYQKIYQAPWLGKVEKGDMW
KWADNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTSYGAISPKDRNQSDMILPIVLQHLCPPWVSFFGLGAVSAAVMSSADSSILSASSM
FARNIYKLAFRQSASDREIVWVMRITIFVFGAMATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVRGTNTYGSVAGYVCGLLLRIGGGEPYLMLPPFIYYPWWQMVDGAVHQKFPF
KTVSMLASLLGNLAFSHLAKYLFESGKLSAKYDVLDAVMSKDSSDFMDKTTLVNRNIIGL
SELAPVKPRLSVTLANTFARKETLTEEDESSPDSPTREEIQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccatccatgtggagggactggtggcgatattcatcttctacaccctgatcctggtc
gtgggaatatgggcggcgtggaagaacaagaactcgggggtgtccgagggagccgaccgc
agcgagacgatcatggtcggagggagagatatcgggttatttgttggcggatttaccatg
acagcgacttgggtcggaggaggctacatcaacggcaccgctgagtatgtctatctgccc
gactacgggctggcctgggcgcaggctcctttcggttacgcgctcagtctggtcgtgggt
ggtctcttcttcgccaagccgatgcgctcccgtggctacgtcacaatgctcgacccgttc
cagcagatctacgggaagaggatgggcgggctgctcttcatccccgcgctcatgggggag
atattctggtctgccgccattttatcggcgctcggcgccaccctgagtgtgatcatagac
atgaacatcaacatgtcagtggtcgtctccgcactcattgccatattctacacgctggtg
gggggcctctactccgtggcctacacagacgtggtccagctcttctgcatctttgtgggc
ctgtggatgagcgtgccctctgccctggccaaccccgcggtgtcggacatcggtgtgacg
gcgtaccagaagatctaccaggcgccctggctggggaaggtggagaagggagacatgtgg
aagtgggccgacaacttctgcctgctgatgctggggggtattccctggcaggtgtatttc
cagcgtgttctctctgcctcgtcggccacctacgctcaggtgctctccttcctggccgcc
ttcggatgcctcgtcatggccgtgccctcagtccttataggagccataggggcttcaaca
gactggaaccagacgtcgtacggagccatctctccgaaggacaggaaccagtcggacatg
atcctgcccatcgtgctgcagcacctgtgcccgccctgggtgtccttcttcgggctcggg
gccgtgtccgccgccgtcatgtcctccgcagactcctccatcctctccgccagctccatg
ttcgctagaaacatctataagctcgccttccgccagtctgcctcggaccgtgagatcgtg
tgggtcatgcggatcaccatcttcgtgttcggcgccatggcgacggccatggcgttgctg
acggggacggtgtacggcctgtggtacctgagctccgacctggtgtacgtgatcatcttc
ccgcagctgctgagcgtgctgttcgtgcgcggcaccaacacctacggctccgtggcgggc
tacgtgtgcggcctgctgctgcgcatcgggggcggggagccctacctcatgctgcccccc
ttcatctactacccctggtggcagatggtcgacggcgcggtgcaccagaagttccccttc
aagaccgtctccatgctggcctcgctgctgggcaacctggcgttctcccacctggccaag
tacctgttcgagagcggcaagctgtcggccaagtacgacgtgctggacgccgtcatgtcc
aaggacagcagcgacttcatggacaagaccacgctggtcaaccgcaacatcatcggcctg
tcggagctggccccggtcaagccccgcctcagcgtcacgctcgccaacaccttcgcccgc
aaagagacgctgaccgaggaggacgagtccagccctgactctcctacccgcgaggagatt
cagtga
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