KEGG   Clupea harengus (Atlantic herring): 105905506
Entry
105905506         CDS       T09045                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04068  FoxO signaling pathway
char04136  Autophagy - other
char04140  Autophagy - animal
char04621  NOD-like receptor signaling pathway
char04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    105905506 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105905506 (atg12)
   04136 Autophagy - other
    105905506 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    105905506 (atg12)
   04622 RIG-I-like receptor signaling pathway
    105905506 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105905506 (atg12)
   04121 Ubiquitin system [BR:char04121]
    105905506 (atg12)
   03029 Mitochondrial biogenesis [BR:char03029]
    105905506 (atg12)
Membrane trafficking [BR:char04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    105905506 (atg12)
Ubiquitin system [BR:char04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   105905506 (atg12)
Mitochondrial biogenesis [BR:char03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    105905506 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 105905506
NCBI-ProteinID: XP_012688966
Ensembl: ENSCHAG00000017434
UniProt: A0A6P3W5L7
LinkDB
Position
11:complement(22692222..22694556)
AA seq 134 aa
MTKLHSSNAGTFAKMSDNADSPTESQKDDPPTQQPPTEDSGLVDEKKKIDVLLKAVGDTP
IMKTKKWTVERGRTVHSLSQFISRFLKLEPSEQLFIYVNQSFAPSPDQEVGVLFESFGSD
GKLVLHYCKSQAWG
NT seq 405 nt   +upstreamnt  +downstreamnt
atgacaaagctgcactcctccaacgcaggcacatttgcaaagatgtcagataatgctgac
tctccaacagaatcacaaaaagatgatccgcctacacagcagcctccgactgaagactct
ggacttgtagatgaaaagaaaaagattgatgtgttactaaaggctgttggagacactccc
attatgaagaccaagaagtggactgtggagcgtggaagaacagtgcattctctttcacag
tttatctcacgttttctaaagcttgagcctagtgaacaactgtttatatatgtcaatcag
tcctttgcaccatcgcctgaccaagaagtaggtgtgctttttgagtctttcggcagtgat
ggaaagttggttctacactactgtaaatcccaagcctggggctga

DBGET integrated database retrieval system