Clupea harengus (Atlantic herring): 105905510
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Entry
105905510 CDS
T09045
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105905510 (irx2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
105905510 (irx2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
105905510
NCBI-ProteinID:
XP_012688970
Ensembl:
ENSCHAG00000011016
UniProt:
A0A6P3W445
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Position
11:complement(21613887..21618914)
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AA seq
458 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPTGYGASALAAPRSEDLARSSSGSAFSPYPGSAAFSASAS
GFSSPLAYPTDPATGLPSYMGSPYDTHATGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEDDPDGERKDERTEKNPDNSETSAEDEGISLHVDTLTDHSCSADSDVEKAGCR
MGDLGCESGSETKDKYGDNMRDTASEERPRGLSPKPVTPSPLVGVEAPLLNLHHREDSRN
NSIKSCMDSRVTSEQHTTAAKPKLWSLAEIATSDSKQQVGQSAHPTSGLLTSSASCASPG
SALYPASSLLARPIYYTSAFYSNYSNYGNFGALQGQGILRYNSSGLATEGLAQSVLNANA
LQKQCGDPLLKTNPNHTEQHFRSAHVEPKKGRCHTCFE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctatcagcctccgggctctctggctctctactcctgc
ccgacgggatacggtgcttcggctttggccgcccccaggagcgaggacttggctcggtct
tcatcgggatctgctttcagcccgtaccccggctcggccgccttctctgcctcagccagc
ggcttctccagcccgctagcctaccccaccgacccggccaccgggcttccgtcgtacatg
ggctcaccatatgacacgcacgcaacgggcatggcgggagcgttaagttatcatccgtat
ggctcccccggttatccctaccagctgaacgatccggcctatcgcaagaatgcaacgcgg
gacgccacggcaacgctgaaggcctggcttcaggagcaccggaagaacccataccctacc
aaaggcgagaagatcatgttggccatcatcactaagatgaccctcacgcaggtgtccacc
tggttcgccaacgccaggaggaggctgaagaaggagaacaagatgacgtgggctccccgg
aataagagcgaggacgaggatgaagatgaccccgatggtgaaaggaaggatgagcgcacg
gagaagaaccctgacaacagtgaaacctctgctgaggatgaaggcatcagtctgcacgtg
gacaccctaactgaccactcgtgctcagcggactcggacgtggagaaggccggttgcagg
atgggagacctggggtgcgagtctggatcagaaactaaagacaaatacggggataacatg
cgtgacaccgccagcgaggagcgaccccgaggcctatcgcccaagccggtgacaccttct
ccgctggttggggtagaggcccctcttttaaacctacaccaccgggaagactccagaaac
aacagcatcaagagctgcatggacagccgcgtcacgtcagagcagcacaccacggctgcc
aaacccaaactctggtctcttgcggaaattgcgacttcggactcaaagcagcaggtggga
cagagtgcgcacccgacttccggactgttgacctccagcgcctcttgcgcgtccccgggc
agcgcgctctaccccgcctcgtctctcctcgcgcggcctatttactacacctccgccttc
tacagtaactactcaaactacggcaactttggagctctgcagggacaaggcatcttacgt
tacaactcctctggcctggcgacagagggactagcgcagtctgttctcaacgccaacgcg
cttcagaagcagtgcggcgacccgctcctaaaaacgaatccaaaccacactgagcaacac
ttcagatccgcacatgtagaacccaagaaaggtaggtgtcacacttgctttgaataa
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