Clupea harengus (Atlantic herring): 105905511 Help Entry 105905511         CDS       T09045                                  Symbol ubr1 Name (RefSeq) E3 ubiquitin-protein ligase UBR1   KO K10625   E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27] Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:char04121]     105905511 (ubr1) Enzymes [BR:char01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105905511 (ubr1) Ubiquitin system [BR:char04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    UBR box proteins     105905511 (ubr1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRT6_C WHD_UBR1 zf-UBR ClpS zf-RING_5 Peptidase_S64 Motif Other DBs NCBI-GeneID:  105905511 NCBI-ProteinID:  XP_042564458 Ensembl:  ENSCHAG00000008511 UniProt:  A0A8M1KPZ3 LinkDB All DBs Position 8:30485856..30551461 Genome browser AA seq 1754 aa AA seqDB search MYLACCSRRETIYGRRNMAEDEKILNALELSKRWKEASDSGTAILCHLMEEVPQVYCLEA EPRPPEEELLAQQRLLLPLECFLFGEDPRVGVEKLQQRGGTASQLCGRVFKEGETVYSCR DCAIDPTCVLCMDCFQNSTHKGHRYKMHASSGGGFCDCGDLEAWKTGPCCSKHDTGASIP METEECVLETDLQQRAQLLFQVLLNYCTDLLVWEESQELSTELQPRVKENMYLCVLYNDE HHSYDHVIYTLQRSINCDHNEAQTHTALIDKEGRRAVKRGTLRTCQQAKDLIRSNSEHIS LQPLRVEILHTAVMAHQSLALRLGVWFQQVIGYSVGLRQVFCQVALQPSADGDRPSPICR LMLHDARLYKGARKIIHELIFCSLLMETEYKRQFALEFTKLYQQLQKDFISDDHERNISI TALSVQIFTVPTLARQLIEDGNVITVIINTVMEMLREHLDFNNRFHFQGYNSDKFFRVQV IFHDLRYILISKPSVWTDELRTHFFNGFKVFLDLLNCMQGMEEVKRQFGQHIEVEPEWEA GFSIQIQLHHILSMFQDWCTSDEMVLLMAFKECHRFFMRCTNQPLHSEPVDAYMCKHIFH HRPYKVSQEPVSIHLPISRLLAGLYVHLCRTGALKLLPQYMDLESLDFTFLAEHPLRCVV LAAQVSAEMWRRNGLSLVSQVYYYQDVKCREEMYDKDVIILQIAASKMDSNHFLMLILLR FELFDVFNGSSSKDQEILRQWNKLTEEMLYLLIVIAGERYVPGISDVSREDVTMREVIHL LCIQPMAHSSLVKSLPEDESHETGLETVITKVSTFKKPGVSGHGLYEVKKECLQEFNPFF YHYTKSQFSKAEDTQKKRRVQEGNDKALRPPYRLPSRKPSPEWCVSLAAMCSSMCSGTCS RGRSRTAPRCGLALHLIAQALVEENSQLEAANVEDVTFNFSLKARQIGSEQGKSLFHFLS KMKTLPSLEAQKDMITWTLQMFEMVKCLRENSSPAPSQSVEQAKLEESVQDKEKAERRRK AEAAKRHRQKVMAQMSAMQKNFIETHKMLYDNMPDSGNQGDPTTELSSACESSPMELSES RVAVGPQQGMGLSERESLTCILCQEEQEVVAGGAAMVLTACVQRSTVLTQSHGRSLYTPD GCYPLLMPPDLAVGTHTGSCGHVMHATCWQKYFEAVQNTTRNRLHAEMIIDLENGEYLCP LCKSLCNTVIPLIPLEPASLNYESAEIVGQLLTLQRWIQIILARIKGLTVKAQEAEESSE SATVAEMGTFGDDPAEFRSILSFGVQEPRKFSESVLQMVQVCATTVHRVGLQVPPNEQCP DVPIMAWNTCAYTIQATENMLVGEGKGLFGSLQNRQLAGLKAVVQFAAAQRRRSSQAVIQ KHFTDMLAVLVPISNVEGSSSILEMDFFHLLVGLVLSIPSLYQEEAVDLQPSSISTAYNH LHLLHLVTMAHVLQILLSSQDLPVGMEGDKDAEAESAAAVYSTVAQYTGGLRTDISGCSV ADCVRKGVLPFLRCAALLFNCLTGVAPPEELLDKAVTPEVQLEALCCYLALPSNLFQLFH THLDTVDPLLQRWCGNPALSKALTAQVPATRYPRKRNRLINLPEDYSVLLNQASQFKCPV SSDDDRKHPTLCLFCGDMLCSQSTCCQKQLDGENVGACTAHAATCGAGVGLFLRVRECEI VLMASKTRGSTYPAPYLDDYGETDPQLGRGNPLHLCPERYRKLHYLWLQHCVPEEIARSL EVLNVMFAFEWHSL NT seq 5265 nt NT seq  +upstreamnt  +downstreamnt atgtacctagcatgttgcagtaggcgagaaacaatttacggcagaaggaacatggcggaa gatgaaaaaatattgaacgctctggagcttagcaagagatggaaggaggcgtcagacagt ggcacagccatcctgtgtcatttgatggaggaggtaccacaagtctactgcctggaggcg gagccacgaccaccggaagaggagctactagcgcagcagcgactgttattaccgctggag tgtttcctgtttggggaagaccctcgtgttggcgtggagaaactccagcagagaggaggg acagcttcacagctatgtgggagagtcttcaaggagggagagactgtctactcgtgcaga gactgtgccattgaccccacatgtgtgctctgtatggactgtttccagaacagcacacac aaagggcatcgctacaagatgcatgcctcatcaggtggtggcttctgtgactgcggtgac ctggaagcctggaagactggcccctgctgctccaaacacgacactggagcatctatcccc atggaaacggaagagtgtgtgctggagacagatctccaacagcgtgctcagctgctcttc caggtgctgctgaactactgcacggatctgctggtatgggaggagagccaggagctgtcc acagagctccagccaagggtgaaggagaacatgtacctctgtgtactgtacaatgacgag caccactcctacgaccatgtgatctacaccctccagcgctcgatcaactgtgaccacaac gaggcccaaacacacactgctcttattgataaggaggggcgcagggcagtgaagagagga actctgaggacctgccaacaagccaaagatcttattagatccaactccgagcacatctcc ctccagcctctccgtgtggagatcctacacacagcagtcatggcccatcaaagtttggcc ttgcgactgggcgtctggttccagcaggtcattggatactctgtgggtctcaggcaggtg ttctgtcaggtggccctgcagccttcagctgatggggaccggcccagtccaatctgccgg ctcatgctgcacgatgctcgtctctacaaaggcgctcgaaaaatcatccatgaactgatc ttctgtagccttctgatggagactgaatacaagaggcagtttgctttggaattcacaaag ctatatcagcagcttcagaaagacttcataagtgatgatcatgagagaaacatatccatc acagcgctgtctgtgcagatcttcacagtaccaacgctggccaggcagttgatagaagat ggaaacgtgataaccgtgatcataaacaccgtgatggaaatgctaagggagcatctggac ttcaacaatcggttccattttcaaggctacaactctgacaagttcttccgagtccaggtc atcttccatgacctaaggtacatcctgatcagcaagccttcggtgtggacggacgagctg aggacccatttttttaatggtttcaaagtctttctagacctccttaactgcatgcagggc atggaggaggtgaagaggcagtttggacagcacattgaggtggagccggagtgggaggcc gggttctccattcagatccagttgcaccacattctgtccatgttccaggactggtgcacg tctgacgagatggttctcctcatggcgtttaaagaatgccacagattcttcatgcgctgc accaaccagcctctccacagtgaaccggtagatgcgtacatgtgtaagcatatattccat caccggccctacaaggtgtctcaggagccagtgagcatccatctgcccatctctagactg ttagcaggtctctatgtacacttgtgcaggacaggagccctaaagcttctccctcagtat atggacctagagagtttagacttcaccttcttggctgaacatcctctacgctgtgtggtt ctggcagctcaagtgtcagcggagatgtggcgcaggaatgggctctctcttgtcagccag gtatactactatcaagatgtgaagtgcagggaagagatgtatgataaagacgtcatcatt cttcagatcgcggcctccaagatggactccaaccacttcctcatgctgatcctgttgcgg tttgagctctttgatgttttcaatggcagctcaagcaaagatcaagaaatcctgcgacag tggaataaactgacagaggagatgctctatctgcttatcgtcatcgctggggagcggtat gtcccgggcatcagtgatgtgagcagagaggatgttaccatgagggaggtgatccatctg ctctgcatccaaccgatggcccacagcagcctcgtcaagagcctgcccgaggatgaaagc cacgagactggcctggagacggtcatcacgaaggtttccactttcaagaaaccaggggtg tcggggcatggactgtacgaggttaaaaaggaatgtctacaagagttcaaccccttcttc taccactacaccaagtctcaattcagcaaggctgaagacacacagaagaagagaagagtg caagaagggaatgataaagcactgaggcccccataccgcctcccttcacggaagccttct ccagagtggtgtgtctccttggctgcgatgtgttcatccatgtgctcaggcacgtgctcc agagggcggtcgaggaccgcgccccgctgtggactggcccttcacctcatagctcaggcg cttgtggaggagaactcccagctggaagctgccaacgtggaggatgtgacctttaacttc agcctcaaggctcgccagataggatccgagcaaggcaagtcattgtttcatttcctatcc aaaatgaaaacactgccatctttggaggcacagaaggacatgataacatggacgttgcag atgtttgaaatggtgaagtgccttcgtgaaaactccagccccgcaccctctcagagtgtc gagcaggcgaagctagaggagagtgtacaagataaggagaaggcggagcggaggcggaag gcagaagctgctaaaaggcaccggcagaaggtcatggcccagatgtccgccatgcagaag aacttcatcgagacgcacaagatgctgtatgacaacatgccagacagcgggaaccagggc gaccccactactgagctctcgtctgcctgtgagagcagtcctatggagctcagtgagagt cgtgtggccgtgggcccacagcaaggcatgggactctcagagagggagtctctgacctgc atcctatgtcaagaggagcaggaggttgttgccggtggagccgctatggtgctgaccgcg tgtgttcagaggtccacggtgctcacccagagccatggccgcagcctctacaccccagat ggctgctatcccctcctcatgccccctgacctggctgttgggacacacacaggcagctgt ggacatgtcatgcacgccacctgctggcaaaagtattttgaagcggttcagaacaccacg cggaaccgcctccatgctgagatgatcatcgacctggagaacggggagtatctgtgtccc ctctgcaagtcgctctgcaacaccgtgatccctctcatccccctggagcccgcctcgctc aactatgaaagcgcagagatagtgggccagctcctcactcttcagcgctggattcagatc atcttggctcgtattaaaggactcactgttaaagcccaggaagccgaggagagcagcgag agtgccactgtggcagagatgggcacgtttggagacgacccggccgagttccgctccatc ctcagctttggtgtgcaggagccacgcaaattctccgagagcgtgttgcagatggtgcag gtgtgtgccacaacggttcaccgggtaggcctgcaggtaccgcccaacgagcagtgtcca gacgtgcccattatggcatggaacacgtgcgcctataccatccaggcaacagaaaacatg ttggtgggggagggaaagggcctatttgggtccttacagaacagacaactggccggcctg aaggctgtggttcagtttgctgctgcccagaggcggaggagttcccaggcggtgatccag aagcattttacagacatgctagcagtgctggtgcctatctccaatgtagaggggtcatca tccattctggaaatggactttttccaccttttggtgggtcttgttctgtcaatcccttct ttgtatcaggaagaggcagttgaccttcagccttcttccataagcactgcctataaccac ttacatctgctgcacctagtcaccatggcccatgtgttgcaaatactgctgtcatcacaa gatcttcctgttgggatggagggcgataaggacgcggaggctgaatcagcagctgctgtg tactcaactgtggcccagtacactggaggtttaagaacggacatttcgggctgttctgtg gcagactgtgtgaggaaaggagtccttccctttctgcgttgtgctgcgctgttgttcaac tgcctaacaggagtggcccccccagaggagctgttggacaaagcagttactccagaggtc caactagaggcactgtgttgttaccttgctctgccttctaacttgttccaactgttccac acccacttggacacggtcgatccccttctgcagaggtggtgtgggaacccagccctttcc aaagctttaactgctcaagtaccagctaccaggtatcccaggaaacgcaatcgactaatc aatcttccagaggattacagtgtactgctcaaccaggccagccaatttaagtgccccgtg tcttcagacgatgacaggaagcaccctaccctgtgtctcttctgtggcgatatgctgtgc tctcagagcacctgctgtcagaagcaactggacggagagaatgtgggtgcctgcactgct cacgctgccacctgtggggccggagtgggattgttcctgagggtgagagagtgtgagatt gttctcatggccagcaagaccagaggaagcacatatccagctccatatctggatgactat ggagagaccgatcctcagcttggccgtggaaaccccctgcacttgtgtccggagcgctac aggaagctccattatctgtggctgcaacactgcgtcccagaggagatcgctcggagtctg gaggtgctcaatgtgatgtttgccttcgagtggcactcgctgtga

DBGET integrated database retrieval system