Clupea harengus (Atlantic herring): 105905552 Help Entry 105905552         CDS       T09045                                  Symbol blm Name (RefSeq) Bloom syndrome protein homolog   KO K10901   bloom syndrome protein [EC:5.6.2.4] Organism char  Clupea harengus (Atlantic herring) Pathway char03440   Homologous recombination char03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     105905552 (blm)    03460 Fanconi anemia pathway     105905552 (blm)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:char03032]     105905552 (blm)    03400 DNA repair and recombination proteins [BR:char03400]     105905552 (blm) Enzymes [BR:char01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      105905552 (blm) DNA replication proteins [BR:char03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     105905552 (blm) DNA repair and recombination proteins [BR:char03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     RecQ family DNA helicases      105905552 (blm)     Bloom's syndrome complex (BTR)      105905552 (blm)    FA (Fanconi anemia) pathway      105905552 (blm) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD BLM_N BDHCT Helicase_C RecQ_Zn_bind HRDC RQC ResIII BDHCT_assoc Syntaxin Motif Other DBs NCBI-GeneID:  105905552 NCBI-ProteinID:  XP_031420304 UniProt:  A0A6P8F5R1 LinkDB All DBs Position 3:8146710..8161469 Genome browser AA seq 1478 aa AA seqDB search MPSIPQNNLKEQLERHSNAVQSKLSLARPKPGSFTFKKKSTSSIINTEGASKVTDSSGLA NRKVNVPHNSAVTKLPLTFSTKTHRPQTPKFNFSANPKSKHQVITLPPNPFAVSKSIPDQ AASKLSSALVNLDDNPSANKTTLLDCSLGIHTADWDDFDDFETPVKGKTVSPSPALHPAS AEPGGTPVKRKTESPGHATPVRLSRGINAESGEHRETEGDKSPASKTTSTESARAGCSHV GSPETLVSVEDLDSNLEVCNASQDNIHPHPEETEPGDSPVKFMKRHQSIRKRQAVLSDSE EEAEVESGLSVKLKDDDPVCIQDTQIDCMDKCESRVDMDCIPPSPPPENESSSLRLRKTS PQSRCSRVTSLVGVTDVRSKDINGPDVKSDDALFSVMEAICGLVDSIPEHELIGLNCGTQ LLVQRAQRKRIIALGGTPRTSISDKGVTPHPKPSFHQFSSVFDNTPSLKLFTSPVCEEIK DSSKKEFQFRKSISSVLPMDYDSSVFEDSSCLIGDVQTPGSSWRPSSSSTKPVLTEEKNS KCSSSFNFWSSNDQNDDFPSRPSSAQSDVQIIEDEPEELFYSTKRPGDWTDTETRGGSSR PPSSHTNTWTDADGDDFYNDDFDIDDFDEADIPNYLDEPQSASTSKWDSTSLGSAIREGG PVKSTQARSTVSTPSPAPASKPSKPASPEPDFRNPAHDRFRGFNFPHSAEMMKTFHKRFG LHQFRFNQLEAINASILGQDTFVLMPTGGGKSLCYQLPGSLSSGVTVVISPLKSLIVDQL QKLTTLGIPATSLSGEKSDSEASRIYMQLSKKDPVIKLLYATPEKVSSSGRMTSALQNLF ERALLARFVIDEAHCVSQWGHDFRPDYKRLNELRQKFPRVPIMALTATATPRVQKDILNQ LQMSSPQVFTMSFNRHNLKYTVLPKKPRKVDEDCIEWIKKHYPRGSGIVYCLSRNDCDGM AESLQRAGIAALAYHAGLKDNDREYVQCKWINQDGCQVICATIAFGMGIDKPDVRYVIHA SLPKSVEGYYQESGRAGRDGEVSECVLFYAYSDVIRIKRLLTMDKNGNRQAIATHFNNLH SMVHFCENMSECRRIQLLAYFGEHKFNSSFCKEHPEVVCDNCARPNKYKARNVTEDVKKI VRFVQENCEKVGNRYNKSAQQSRLTLNMLVDIFIGHKSARVQTGMFGVGAAYSRHNADRL FKKLVLDNIVEEDLYIGNSGQAVAYISAGKKATNVLSGYMQVEFYETENASSIRKHKAAV TKNVSKREEMVHKCLEELNDLCKKLGKIFGIHYYNIFSTATLKKIAETLSADPEVLLQID GVTEDKLEKYGAELIELLQKYSEWQLPVEEPTENSGWIDMAQGRHERDEDDDEEDASSAY FQGNSRGGKRKKSGYSRKPKRRKGGFQSSSAKGGNSNSSWGSSGSGSGRGGYKSRGRGAA GRGAAGRAPAGRRPGFMALPTPHSTARPFLKPTFSHMP NT seq 4437 nt NT seq  +upstreamnt  +downstreamnt atgccgagcattccgcagaataatttgaaagagcaacttgaacgacacagcaatgctgtt cagagcaagttatcactggccagacctaaacccgggtcttttactttcaaaaagaagtcg acttcgtccatcattaacacggaaggtgcatcaaaggtaacggactcaagtggtctagca aacaggaaagtcaatgttcctcataacagtgcagtaaccaaactccctttgacgttttca accaagactcataggccgcaaactccaaaattcaacttctcggctaaccctaaaagcaaa catcaagtcattacgcttccaccaaacccatttgcagtaagtaagtccattccagaccag gcagcttccaaactctcctcagcactggtcaatctagatgataacccttcagcaaacaaa actactttgctggactgctctctcgggatccacacagccgactgggatgactttgatgac tttgagactcctgtcaagggtaaaactgtgtctccaagccctgctttgcatcctgctagc gctgaaccagggggcactcctgtcaagagaaaaacagagtccccaggccatgccacaccg gtgaggctgtcacgtggaatcaatgcagaatcaggtgaacacagagaaacagaaggtgac aagagtccagcttctaaaaccactagcacagagtctgcaagagctggttgcagccacgtc ggttcacctgaaactctagtgtcggtggaagatctggacagcaacttggaggtgtgcaat gcttcacaggataacattcacccacacccagaagagactgagccaggagactcaccagtg aagttcatgaaaagacaccaatcaatccggaaaagacaagctgtgttgagtgacagcgag gaggaggctgaagttgagtcggggctatcagtcaaattgaaagatgatgaccctgtttgc attcaagatacgcaaattgactgcatggacaagtgtgagtcaagggtggatatggactgt ataccaccatccccaccacctgagaatgagagttcctctctgagattgaggaaaactagt ccccagagtcgctgtagtcgagtcacaagcctggtaggagtcaccgatgtccggtccaaa gatatcaatgggcctgatgttaaatcagacgatgcactcttcagtgttatggaggctatc tgtgggctggtggactccatccccgagcatgagttgattggcctcaactgtggcactcag cttcttgtgcagcgagctcagaggaaaagaattattgcccttggaggaacacctaggaca tccatctcagacaagggagttacacctcaccctaaaccatcattccatcagttcagttca gtttttgacaacacacccagtttaaagttatttacgtcacctgtctgtgaagaaataaag gacagttccaagaaagagttccaattcaggaagtccatctcctccgtcttgccgatggat tacgacagcagtgtctttgaagactccagctgtcttatcggcgacgttcaaactccaggc tcctcctggagaccctcatcctcctccaccaaacccgttctcaccgaggagaaaaacagc aagtgctcaagcagctttaacttttggagcagtaatgaccagaatgatgacttcccatca aggccatcttccgcgcaatctgatgttcagataatagaggatgaaccagaggaattgttt tactccactaagaggccaggtgattggactgataccgagactagagggggaagcagcagg ccaccatccagtcacacaaacacatggacagacgcggacggggatgacttctacaatgac gactttgacatcgacgactttgatgaggcggacattccgaactacttagacgaacctcag agcgcttccacctcgaaatgggactccacttcgctcgggtccgcaatacgggagggaggg ccagttaaatccacgcaggccaggagcacagtctccaccccgagccctgccccagcttcc aaacccagtaaacctgcctctccagagcctgatttccgcaaccctgcccatgaccgcttc agaggcttcaacttccctcactcagcagagatgatgaagaccttccacaagcggtttggc ctgcaccagttccgctttaaccagctggaggccatcaatgcttcaatactgggtcaagac acatttgtcttgatgcctacaggaggaggtaaaagtctgtgctaccagctgcctggcagt ttgtcttcaggtgttactgtggtgatctcaccattgaagtcgctaattgtggaccagctg cagaagctaaccactctgggtatcccagccaccagtctgtctggggagaagagtgacagc gaggccagccgcatctacatgcagctgtccaagaaggacccggtcattaaactgctctac gccacgccggagaaggtgtcttcgagtggcaggatgaccagtgctctgcagaacttgttt gagagggccctgctggcgcggtttgtcatcgacgaggcacattgtgtcagtcagtggggc catgacttccggccagactacaagcgtttgaacgagctgcggcagaaattcccccgtgtg cccatcatggctctgacggccacagcgacgcctcgtgtgcagaaggacatcctcaaccag ctgcagatgagctccccacaagtcttcaccatgagctttaatcgtcacaacttgaagtac acggttctacccaagaaacccaggaaggttgacgaagattgtatcgaatggatcaagaaa cactacccccgtggatctggcatagtgtactgtctgtcgagaaacgattgtgacggtatg gcagaaagtcttcagagagcgggcatcgctgcactggcgtaccacgctggtctgaaggat aacgacagggagtacgtccagtgcaagtggatcaaccaggatggctgccaggtcatctgt gccaccatagcctttggcatgggtatagataagccggacgtgcgctacgtcatccatgcc agcctgcccaagtctgtggagggctactaccaggagtcggggagggcagggcgagacgga gaagtctcggagtgtgtgctcttctacgcctactccgacgtcatccgcatcaagagactc ctcaccatggacaagaatgggaaccgtcaggccatagccacgcacttcaacaacctgcac agcatggtgcacttctgtgagaacatgtcggagtgcagacgcatccagctcctggcttac ttcggcgagcacaagttcaacagcagcttctgcaaggagcacccggaggtcgtgtgtgac aactgtgccagaccaaacaaatacaaggcgaggaatgtgaccgaagatgtgaagaagata gtgagatttgtgcaggagaactgcgaaaaagtcggcaaccgctacaacaaatctgctcag cagagccgactgacccttaacatgctagtggacatcttcattggccacaagagtgcccgc gtccagacagggatgtttggagtcggagcggcctattccaggcacaacgcagaccgtctc ttcaagaagttggtgttggacaacatcgtggaggaggacctgtacatcggtaatagcgga caggctgtggcctacatctctgccggcaagaaggccacgaacgttctgagtggctatatg caggtggagttctacgagacggagaacgcctccagcatcaggaagcacaaggcagctgtc accaagaacgtctccaagagagaggagatggtgcacaagtgcctggaggagctcaacgac ctgtgcaagaagctgggcaagatctttggcattcactactacaacatcttctccactgcc acgctcaagaagatcgctgagacgctgtctgcagaccccgaggtgctgttgcagattgat ggtgtgactgaggacaagctggagaagtacggagcggaactcatcgaactgctgcagaag tactccgagtggcagctgcctgttgaggagccgactgagaattccggctggatagacatg gcgcagggtcgccatgagcgagacgaggatgatgacgaggaagacgcttcttctgcttac ttccagggcaacagccgaggagggaagaggaagaagtcggggtactccaggaaacccaag aggagaaaaggaggcttccaaagctcctctgccaaaggggggaacagtaacagctcgtgg ggctcctcaggctcgggcagtggcaggggtggctataaatctcgaggccgaggggcagcc ggccgaggggcagccggccgagccccagcaggcaggagaccaggtttcatggccctaccg acgccccacagcacggcacgccccttcctcaaacctaccttctctcatatgccctga

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