KEGG   Clupea harengus (Atlantic herring): 105905633
Entry
105905633         CDS       T09045                                 
Name
(RefSeq) vimentin-like
  KO
K07606  vimentin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105905633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105905633
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105905633
   04147 Exosome [BR:char04147]
    105905633
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     105905633
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     105905633
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105905633
  Exosomal proteins of other cancer cells
   105905633
SSDB
Motif
Pfam: Filament FPP CC_Bre1 FKBP15 DUF1664 ANG-1 DUF3450 DUF7491 WXG100 Baculo_PEP_C COLEC12 DUF8104 Prefoldin SlyX NPV_P10 HH_AprE Prominin DivIC Laminin_II ATG17_like CCDC138_cc Cep57_CLD_2 PUMA_CC
Other DBs
NCBI-GeneID: 105905633
NCBI-ProteinID: XP_042565377
UniProt: A0A8M1KNC1
LinkDB
Position
12:complement(2717944..2727527)
AA seq 404 aa
MRGSSHSQKSLSVSNSSSVRVQSPSPSRCKGSSYSRGRNGYHGGVSAVEVGTEIHQQHAN
EKEEMHEVNVRFAGYIGKVQALELRNAQLQAELNALQGRFKGGPGGLGEEYEIKFKEMRD
LIEALTAQKGAADIERGYIEEEIDVWRLKLEEEMALKEEAEMILLEFRQDVDNATLQKAD
LERCVEQLLAEIEFLKKLHDEEVALLMKQIEDSKVTVELDSDRPDLAAYLRNMRAEIEAV
AARNVQEAEKWYKGKFDTLKQTAGKHEDQMKTMKDEITTFHSQVTELQNQIDGLRASNSA
LEAQLEGMEAAHQDKVAGLEDIIDQLENQLCETKMEMSKYMQDYQELLHIKLKLDAEIAT
YRKLLESEEKRLGISTEVSESGNMNSSESSGTGVSSSVFLLVAW
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgagaggctcctcacactcccagaagtccctatcggtgagcaactccagcagtgtgcgg
gtgcaaagtccatctccttcccgctgtaagggatcctcctacagccgcggtcgtaatggg
taccatggtggtgtgtctgctgttgaggttggcacagagatccaccagcagcatgcaaac
gagaaggaggaaatgcatgaagtgaatgttcgctttgccggttacattgggaaggtgcag
gccctggaactgaggaatgcccagctgcaggcagagctgaacgcactgcagggccgcttc
aagggaggccctggtgggctcggagaagagtatgagatcaagttcaaggagatgagggat
ctgatcgaggccctgactgcacaaaagggcgcagctgacattgagaggggttacatcgag
gaggagatagacgtgtggaggctcaaactggaggaggagatggccctcaaagaggaggca
gagatgatcctgctagagttccgtcaggatgtggataatgccacgctgcagaaagccgac
ctggagaggtgtgtggaacagctgctggccgagattgagttcttgaagaagctgcatgat
gaagaggttgctcttctcatgaagcagattgaggattccaaggtcactgtggagctggac
tcagaccggcctgacctggctgcctacctgcgcaacatgcgtgctgagattgaggccgtg
gctgctcgcaatgtccaggaggcagagaagtggtacaagggcaaattcgacacactgaaa
caaacagccggcaaacatgaggaccagatgaagaccatgaaggacgagatcaccaccttc
cacagtcaggtgactgaactgcagaatcagattgatggcctgagagccagtaattctgct
ctggaagcgcagctggaaggcatggaggcagctcaccaagacaaggtggcaggactggag
gacatcattgatcaactggagaaccagctctgtgagaccaagatggagatgagcaaatac
atgcaggactaccaagagctgctacacatcaagctgaagctcgatgctgagatcgccacc
tacaggaaactgctggaaagcgaggagaagagactgggaatctctacagaagtctctgaa
tccgggaacatgaattcatccgaatcctcaggaacaggagtgtcatcctctgtgtttttg
ttggtcgcatggtga

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