Clupea harengus (Atlantic herring): 105905633
Help
Entry
105905633 CDS
T09045
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105905633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105905633
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105905633
04147 Exosome [BR:
char04147
]
105905633
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
105905633
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
105905633
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105905633
Exosomal proteins of other cancer cells
105905633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
FPP
CC_Bre1
FKBP15
DUF1664
ANG-1
DUF3450
DUF7491
WXG100
Baculo_PEP_C
COLEC12
DUF8104
Prefoldin
SlyX
NPV_P10
HH_AprE
Prominin
DivIC
Laminin_II
ATG17_like
CCDC138_cc
Cep57_CLD_2
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
105905633
NCBI-ProteinID:
XP_042565377
UniProt:
A0A8M1KNC1
LinkDB
All DBs
Position
12:complement(2717944..2727527)
Genome browser
AA seq
404 aa
AA seq
DB search
MRGSSHSQKSLSVSNSSSVRVQSPSPSRCKGSSYSRGRNGYHGGVSAVEVGTEIHQQHAN
EKEEMHEVNVRFAGYIGKVQALELRNAQLQAELNALQGRFKGGPGGLGEEYEIKFKEMRD
LIEALTAQKGAADIERGYIEEEIDVWRLKLEEEMALKEEAEMILLEFRQDVDNATLQKAD
LERCVEQLLAEIEFLKKLHDEEVALLMKQIEDSKVTVELDSDRPDLAAYLRNMRAEIEAV
AARNVQEAEKWYKGKFDTLKQTAGKHEDQMKTMKDEITTFHSQVTELQNQIDGLRASNSA
LEAQLEGMEAAHQDKVAGLEDIIDQLENQLCETKMEMSKYMQDYQELLHIKLKLDAEIAT
YRKLLESEEKRLGISTEVSESGNMNSSESSGTGVSSSVFLLVAW
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcctcacactcccagaagtccctatcggtgagcaactccagcagtgtgcgg
gtgcaaagtccatctccttcccgctgtaagggatcctcctacagccgcggtcgtaatggg
taccatggtggtgtgtctgctgttgaggttggcacagagatccaccagcagcatgcaaac
gagaaggaggaaatgcatgaagtgaatgttcgctttgccggttacattgggaaggtgcag
gccctggaactgaggaatgcccagctgcaggcagagctgaacgcactgcagggccgcttc
aagggaggccctggtgggctcggagaagagtatgagatcaagttcaaggagatgagggat
ctgatcgaggccctgactgcacaaaagggcgcagctgacattgagaggggttacatcgag
gaggagatagacgtgtggaggctcaaactggaggaggagatggccctcaaagaggaggca
gagatgatcctgctagagttccgtcaggatgtggataatgccacgctgcagaaagccgac
ctggagaggtgtgtggaacagctgctggccgagattgagttcttgaagaagctgcatgat
gaagaggttgctcttctcatgaagcagattgaggattccaaggtcactgtggagctggac
tcagaccggcctgacctggctgcctacctgcgcaacatgcgtgctgagattgaggccgtg
gctgctcgcaatgtccaggaggcagagaagtggtacaagggcaaattcgacacactgaaa
caaacagccggcaaacatgaggaccagatgaagaccatgaaggacgagatcaccaccttc
cacagtcaggtgactgaactgcagaatcagattgatggcctgagagccagtaattctgct
ctggaagcgcagctggaaggcatggaggcagctcaccaagacaaggtggcaggactggag
gacatcattgatcaactggagaaccagctctgtgagaccaagatggagatgagcaaatac
atgcaggactaccaagagctgctacacatcaagctgaagctcgatgctgagatcgccacc
tacaggaaactgctggaaagcgaggagaagagactgggaatctctacagaagtctctgaa
tccgggaacatgaattcatccgaatcctcaggaacaggagtgtcatcctctgtgtttttg
ttggtcgcatggtga
DBGET
integrated database retrieval system