Clupea harengus (Atlantic herring): 105905681
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Entry
105905681 CDS
T09045
Symbol
zeb2b
Name
(RefSeq) zinc finger E-box-binding homeobox 2b isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105905681 (zeb2b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
105905681 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
DUF3138
Csm1_N
zf-H2C2_5
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
105905681
NCBI-ProteinID:
XP_012689167
Ensembl:
ENSCHAG00000012603
UniProt:
A0A6P8ERU6
LinkDB
All DBs
Position
21:20865717..20951856
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AA seq
1241 aa
AA seq
DB search
MKQLIMADGPRCKRRKQANPRRKNAVLNYENVVETGSETEEDDKLLVSEEDGLLNGAASP
SSVANHDAGSPLAGHALLTKHEDDDDDDMRDSGVDHVWHESDMLRASVDGTDEMKDDFDT
MGPDATLQTVGNGTVKNVDCTSDFEEFFAKRKLDDSESHVVSIAEYLQRGDTAIIYPEAP
EELSRLGTPEANGQEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEEN
FACPLCNYTFAYRTQLERHMATHKPGRDQHQLLNQGAGNRKFKCTECGKAFKYKHHLKEH
LRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLITVNGRMRNNMKTGSSPTSASSS
PTNSAITQLRHKLENGKPLGLQDQSNHMNIKTEPLDFNDYKMMMASHGFGGPGPFMNGGM
GGGSPLGVHNSAQSPMQHLGMSMEAQLLGFPHLGNNLSEVQKVLQIVDNTVCRQKMDCKP
EDISKLKAYMKDLSAQMEEQKQSLASAGAQQGGLPVVNHNGATKSIIDYTLEKVNEAKAC
LQSLTTDSKRQFSNIKKEKSNHTVDLGTEEKKHSENNLMFTPFSCQYCKEAFQGPIPLHQ
HERYMCKMNEEIKAVLQPSENLTSNKQGMFAEKHALLLSSIIAEKAMTGPINPYKDHMSV
LKAYFAMNTEPNSEELLKISIAVGLPQEFVKEWFEQRKMYQYGNARTSPLDRGNMEVGLP
PTHHTLIKDSMAARSPVSLVKPHDHITSPSLAEFHNNINNCDTPLRLSKTAQFTGTKQMA
EKLNHSRSNTPSPLNLSSASSKNSHSSSYTPNSFTSEDLQAEPLDLSLPRLMRESKHVLS
MKSQHKPNSVPIDHNNLSSPREHFEEPLNLAYLSKKDFAISNGNGNNNGNHDKSTSHMFA
MNPFSAKPMYTSLPPQSAFPPPTFMPPVQASIPGLRPYPGLDQMGFLPHMAYTYAAGAAT
FAEMQQRRKYQRKQGFQGELLDGTAEYLSGLDDMTDSDSCLSRRKIKKTESGMYACDLCD
KTFQKSSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKREAEEREAAEREAREKGHLEPTELLMNRAYLQGITPQGYPDLE
DRERERERERERERDALLRESMNGGGMRERPKEVDGTYAKIGRREDEFEEEEEESENKSM
DTDPDTLRDEEENGEHSMDDSSVDGKTETKSDHEDNMEDGM
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgatcatggcggatggccccaggtgtaagaggcgaaaacaagccaaccca
agacggaaaaacgcagtcttgaactatgagaacgtagtggagaccggttctgagacggag
gaggacgacaagctgctggtgtccgaagaggacggcctgctgaacggcgcagccagccct
tccagcgtggccaatcacgacgccggatccccgctggctggccacgccctgctgaccaag
cacgaggacgacgacgacgacgacatgagggacagcggggtcgaccacgtctggcacgag
agcgacatgctgcgagcctccgtcgacggtactgatgaaatgaaagatgactttgacact
atgggacctgacgccactcttcagacagttggaaacggtacagttaagaatgttgattgc
acttcagacttcgaggagttctttgccaaacgcaagctggacgacagcgagagccacgtg
gtcagtatagccgagtacctccagcgtggcgacacggccatcatttacccagaagccccc
gaggagctgtcccgcctgggcacgcccgaagccaacgggcaggaggagaatgacttacca
cctggaactccagatgctttcgcgcaactgctgacctgcccttactgcgaccggggctac
aagcgcttgacatcgcttaaggagcacatcaagtaccgccatgagaagaacgaggagaac
ttcgcctgccccctgtgcaactacacgtttgcttaccgcacccagctcgagcggcatatg
gccacgcacaagccaggacgagatcagcaccaactgctgaaccagggggctggcaaccgc
aagttcaaatgcacggagtgtggcaaggccttcaaatacaagcaccatctgaaggagcac
ctgcggattcacagtggtgaaaaaccgtacgaatgcccgaactgcaagaagcgcttctct
cactcgggctcctacagctcccacatcagcagcaagaaatgcatcggcctgattacggtc
aacggcaggatgcgcaacaacatgaagacgggctcctcgcccacgtccgcctcctcctcc
ccgaccaacagcgccatcacccagctgcgacacaagctggagaacggcaagcctctgggc
ctccaggaccagtccaaccacatgaacatcaagactgaaccactggacttcaacgactac
aagatgatgatggcctcgcacggcttcggcggacccggtcccttcatgaacggagggatg
gggggcggaagcccgctgggggtccacaactcggcccagagcccgatgcagcacctggga
atgagcatggaggcgcagctgcttggcttcccccatctggggaacaacctgagcgaggtg
cagaaggtgctccagattgtcgacaacactgtgtgcaggcagaagatggactgcaaacct
gaggacatctccaagctgaaggcgtacatgaaggacctcagcgctcagatggaggaacag
aagcagtcgctggcttctgccggtgcccagcaggggggcctgccggtggtcaaccacaac
ggggccactaaaagcatcatcgattacacgttggagaaggtgaacgaagccaaagcttgc
ctccagagcttgacgacagactcaaagagacaatttagcaatatcaaaaaggagaaatcg
aatcacacagtagacttaggtacagaagagaagaagcatagcgagaataacttaatgttt
acacccttctcttgccaatactgcaaagaggccttccaaggtcctatacctctgcatcag
catgagcgatacatgtgcaagatgaacgaggagatcaaggcggtcctccagcccagtgag
aacctgacatccaacaaacaagggatgtttgcagagaagcacgctttgctgctctcctct
atcatcgcagagaaggccatgacaggacccatcaatccatacaaggaccacatgtctgtt
ctcaaggcatacttcgccatgaacacagagccgaactccgaggagcttctgaagatctcc
atcgccgtcggtctccctcaggaatttgtgaaggagtggtttgagcagaggaaaatgtac
cagtacggaaatgccaggacatctcccttggacaggggcaacatggaggtgggtctgccc
cctacccaccacaccctgattaaagactccatggccgccaggtccccggtgtccctggtc
aagccgcacgaccatatcacgtcaccctctctagcggagttccacaacaacatcaacaat
tgtgacactcccctcaggctctcgaaaaccgcccagtttaccggaaccaaacagatggcg
gagaagttgaaccactccaggagcaacactccatcccccttgaacctctcttctgcatct
tcaaaaaactcccacagcagctcgtacacgccaaacagcttcacgtccgaggaccttcag
gccgagccactggacctatcactgccaagactaatgagggaatccaagcacgtcctgtcc
atgaaaagccaacacaaacccaacagcgtccccatcgaccacaacaacctctcctccccc
cgagagcacttcgaggagcccttgaacttggcttacctgtccaagaaggactttgctatc
tccaatggcaacggcaacaacaacggcaaccatgacaaaagcactagccacatgtttgcc
atgaaccctttcagtgccaaacctatgtacacatccctaccgccacagagtgcgtttcca
ccacccaccttcatgcccccggtccaggccagcataccaggcctgaggccgtacccaggg
ctcgatcagatggggttccttccacacatggcctacacttacgccgcgggggctgccacc
tttgctgagatgcaacagagacgaaagtatcagcgaaagcaaggcttccagggggagctg
cttgacggaacagcagaatatctgtcaggcctggacgacatgacagactcagactcctgt
ctgtcccggaggaagattaagaagacagaaagtggtatgtacgcgtgtgacttgtgcgac
aaaacattccagaagagcagttccctcctaagacacaaatatgagcacacaggtaaacga
ccacaccagtgtcaaatctgcaagaaagcattcaaacacaagcaccacctgatcgaacat
tcgagactgcactcgggcgagaagccctaccagtgcgacaaatgcggcaagcgcttctcg
cactcgggctcgtactcgcagcacatgaaccaccgctactcctactgcaagcgggaggcc
gaggagcgggaggcggcggagcgggaggccagggagaagggccacctggagcccacggag
ctgctcatgaatcgggcatacttgcagggcatcacccctcagggctaccctgacctggag
gatcgggaaagggagcgggaacgggagcgggagcgcgaacgggacgccctcctgcgcgag
agcatgaacggaggaggcatgagagaacggccaaaggaagtcgacggaacgtacgcgaag
atcggacggcgagaggacgagtttgaggaggaagaggaagagagtgagaacaagagcatg
gacacggatccagacacgttgagggacgaggaagagaacggagagcactccatggacgac
agttcggttgacgggaaaacagaaaccaaatctgatcacgaggacaacatggaggacggc
atgtaa
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integrated database retrieval system
