Clupea harengus (Atlantic herring): 105905682
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Entry
105905682 CDS
T09045
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03420
Nucleotide excision repair
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105905682 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
105905682 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105905682 (rad23b)
03400 DNA repair and recombination proteins [BR:
char03400
]
105905682 (rad23b)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105905682 (rad23b)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105905682 (rad23b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Crinkler
Rad60-SLD_2
UBA_3
CUE
Ubiquitin_5
Dsc3_N
Ddi2_HDD
Motif
Other DBs
NCBI-GeneID:
105905682
NCBI-ProteinID:
XP_012689171
Ensembl:
ENSCHAG00000009870
UniProt:
A0A6P3W4M7
LinkDB
All DBs
Position
12
Genome browser
AA seq
394 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDGEETVKALKEKIENEKGKEGFPVAGQKLIYAGKILNDDTALK
EYKIDDKNFVVVMVAKPKAAPAAVQPSPATTTTSSSSTTAPTTPSGAGASAAETPPESAS
KEDKPAEEKPPTSAAPASTPTRSAANVNIFEEATSALVTGQSYENMVTEIMLMGYEREQV
VAALRASFNNPDRAVEYLLTGMPAEGEGHTGAEQVDPAGGGTTAVSTVGLTSPTITASSQ
PAASGANPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQM
LNEPVQEAGQGSGGGGGGGGGGGVGVTTGTGGLAEAGGGHMNYIQVTPQEKEAIERLKAL
GFPEGLVIQAYFACEKNENLAANFLLQQNFDDID
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacattgaaaaccctccaacagcaaacctttaaaatcgacattgacggagaa
gaaacggtaaaagccctaaaggaaaaaatagagaatgagaagggaaaggagggttttcca
gttgcgggacagaagttgatatatgcaggcaaaatccttaacgatgacacagctctgaag
gaatataaaatagatgacaaaaactttgtggttgtcatggtagcaaagcctaaagcagct
cctgctgcagtgcagccttcccctgctaccacaaccaccagcagctccagcactacggcc
cctactacaccctctggtgcaggggcatcagctgcagagacccctcctgagagcgcctcc
aaggaggacaagcctgccgaagagaagcctcccaccagtgccgcacctgcctccacacct
acccgttctgcagcaaatgttaatatttttgaagaagcaacatctgcactggtgacaggc
cagtcatatgagaacatggtgactgagattatgctgatgggctacgagagagagcaagtg
gttgctgcactaagggccagcttcaacaacccagacagagctgtggagtacttgcttacg
ggcatgccagctgagggggagggtcatactggtgcagagcaggtcgatcctgctgggggg
ggcaccacagctgtctccactgtaggtctcacctcccctaccatcacagcttcctcacag
cctgcggcatctggagccaaccctcttgagttcctgaggaaccagccccagtttcaacag
atgcggcagatcatccagcagaacccttctctgctgccagctctcctgcaacagataggc
agggagaacccccagcttctgcagcaaatcagcagccaccaggagcagttcatccagatg
cttaatgagccggtccaagaggcagggcaagggagtggtggtggtggaggaggtggtgga
ggtggcggagtaggtgtcaccaccggcactggcggcctggcagaagctggaggaggtcat
atgaactacatccaggttacaccacaggagaaggaagccattgagaggctaaaggcccta
ggattcccagaaggacttgttatacaggcatactttgcttgtgagaagaatgagaacttg
gctgcaaacttccttttacaacagaactttgatgatatcgactaa
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