Clupea harengus (Atlantic herring): 105905712
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Entry
105905712 CDS
T09045
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
char04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105905712 (notch3)
04371 Apelin signaling pathway
105905712 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
EGF_3
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_Teneurin
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
105905712
NCBI-ProteinID:
XP_031431616
Ensembl:
ENSCHAG00000018234
UniProt:
A0A6P8G6C4
LinkDB
All DBs
Position
1:30592489..30629374
Genome browser
AA seq
2468 aa
AA seq
DB search
MGIYNIWIFLSFLCVVQHVDGLRCVDSYRPCENGGMCISSKCMCRPGYIGPLCQHLDPCH
RGPCHNGAVCKSQVANGIPQYTCVCQRGFRGQDCSQIDACATSPCANGARCVNWSNHYNC
SCPPGFQGKNCRNDIDECRKPGRCLNAGMCQNTHGSYTCRCQPGYSGRTCEIVTLPCAPS
QCLNGGTCHQISDHAYECACLPGFEGHNCETNVDDCPGHKCMNGGLCVDGVNTYNCQCPP
EWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATAVCF
NGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAGFV
GGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYTGPRCEIDINECLSMPCQNDA
TCLDRIGEFTCICMPGYTGTYCEVDVDECESNPCVNDGICRDMVNGFSCTCQPGFTGTMC
QIDVDECASTPCQNGAKCFDRPNGYECRCAEGFEGTLCESNIDNCRPDPCHHGTCVDGIA
TYSCNCDAGYTGYRCENQLNECHSNPCQSGGKCVDLVNKYICQCQHGTSGVNCEINFDDC
ASNPCEFGMCKDGINRYDCVCEPGFTGPKCNVEIDECSSNPCRNGGTCVDDENGFHCQCP
DGFHPPYCYSKVDECASNPCVNGACREDPNGYRCDCEPGWVGKNCDLNRNDCLPSPCQNA
GTCIDQLNGFTCKCRQGFKGNLCQMNINECSSSPCLNSGTCVDGVASFTCLCDLPYNGPT
CAEVLTPCSPNPCSNHAQCINTPDYQGYQCNCLSGWQGQMCTADVNECIANPCKNRGTCT
NTLGAYVCSCRAGFTGANCETDINDCSPNPCLNGGSCSDGVNSFQCSCLPGFTGPRCAVE
VNECQSAPCRNGGTCTDYVNSYTCTCKPGFTGIHCETNIPDCTESSCFNGGTCTDKINGY
TCSCRSGFTGSHCQYEVNECDSQPCLNGGLCQDALESFRCSCPKGYTGNRCQVPVDWCRR
SNPCQNGGRCRQKDAAFTCECMGGWSGRYCDIPGVSCEVAAAQRGYQTDELCHHGGHCVN
TGNSHYCKCPVDYTGSYCESQVDHCEDKPCRNGATCRGYVGGYTCDCMPGYHGENCDMEI
NECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCSTPARPRGTPKCLNNGTCV
DRVGGYKCNCPPGFTGDRCEGDINECLSNPCNPGNSLDCIQLPNDYQCICKPGYTGRRCQ
NRFSVCESQPCQNGGACSVTSSTASGYTCTCQLGYTGANCERSMLCRELSCYNGGSCTLT
TRGARCSCLQGYAGPQCQHRSNEGCSAQPCRNGGLCTEETSFPFFHCQCPAGFTGKRCEQ
PSGHYADPLPPPPPPACPLADCPGKANDGVCDKECNTFACRWDGGDCSLAVNPWANCPDP
RCWRVFNNSQCDESCNNAACLYDNFDCRSKEKVCNPIYETYCIDHFADGLCDQGCNTEEC
GWDGLDCAVKVPENLADGVLVVTVLLPPEELLRTGTAFLQKLSAILRTSLRFRLDQNGEA
MIRPYTRREARLKRELQPHQEVIGSIVYLEIDNRLCSQGSDGCFPSADTAAEYLGALSAT
EMLRFPYPIKAVRTERMRPEDELPEWSKLLLVGVAAVFLLVILVVGMLIARRKREHSTLW
FPEGFFLKKDTSSNKNRREPVGQDALGMKHMPKTVEESLLGDHSDQWIDTDCPEAKRLKV
EEPSMLSDSEDPVDSRQWTQHHLAAADIRMPPSMALTPPQGEFDTDCMDVNVRGPDGFTP
LMLASFCGGGLEPEVAEEEEEESSANIISDLIYQGASLAAQTDRTGETALHLAARYARAD
AAKRLLDAGADANAQDNTGRSPLHAAVAADAQGVFQILIRNRATDLDARMYDGSTALILA
ARLAVEGMVEELITCHADVNAVDELGKSALHWAAAVNNVEATIALLKNGANKDMQDLKEE
TPLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSP
QGHSAAAHHLAVAAGGHTLSPLMCPPSSFMQGLKTTPQGKKSRRPSAKGSGGMIGPHGGN
IGLKESAKMRNKKLTLDMQSALLESSVTLSPVDSLDSPHGGTSNAGYMTNPTSPVAMPSP
GLFHTSMSVPNTPMVHSAMLDGSGPFAVSLAQLNDLGAGGDGGLSMHARVSMASAAVVNP
HSYVLNAGQLGMTMGMVNPVSVPFDWHSRISASQCGQVNMVQAGMMPQTPTMQQGGLLMH
QQMFRGAQPMLQPTPISSTPTVSPIKLASIAEQQPPQHQPQHHSHVLARMGTSSPPTPQQ
TQPPTAFYQQSPQQPQPTPQAAAVAAQPPQAQAPQPGGSSTGLEDYPTPPSQHSYTPTMD
ATPKHYLRLPSEHPYLTPSPESPEPWSSPSPQCVSDWSESTPSPAVSGPAQTQIPHVQES
NGKMQVFA
NT seq
7407 nt
NT seq
+upstream
nt +downstream
nt
atggggatttacaatatttggatatttttatcatttttatgtgttgtacaacatgttgat
ggactccgctgtgtggattcataccgaccctgtgagaatggaggaatgtgcataagctcc
aaatgcatgtgccgacctggctacatcggacctctctgccaacacctggacccctgtcat
cgtgggccgtgccacaacggagccgtctgcaagagccaggtggccaatggcatcccccag
tacacctgcgtgtgccagcgaggattccgaggtcaagactgctcccagattgatgcctgt
gccaccagcccctgtgccaatggcgcccgctgcgtcaactggagcaaccactacaactgc
tcctgcccgccgggcttccagggcaagaactgccgcaatgacatcgatgagtgccgcaag
ccaggaaggtgcctgaacgccggcatgtgccagaacacgcacggctcctacacctgccgc
tgccagccgggctacagcgggcgcacgtgcgagatagtcacccttccctgtgcgccctcc
cagtgcctcaatgggggcacatgccaccaaatcagcgaccacgcgtatgagtgtgcctgc
ctgccaggcttcgagggccacaactgcgagaccaacgtggatgactgccccgggcacaaa
tgcatgaacgggggcctctgtgtggatggggtcaacacctacaactgccagtgcccccca
gaatggacaggccagtactgtgctgaggacgtgaacgagtgcctgatgcagcccaacgcc
tgccacaacggcggcacgtgcttcaacaccatcggcggccacacctgcgtctgcgtcaac
ggctggaccggcgacgactgcagcgagaacatcgacgactgcgccacggccgtctgcttc
aacggtgccacctgccacgaccgcgttgcctccttcttctgcgaatgcccagtgggcaag
accggtctcctgtgtcacctggatgatgcgtgcgtgagcaacccgtgtaacgagggggcc
gtgtgtgacaccaaccccctgaatggcagagccatctgcacctgccctgccggcttcgtc
ggaggagcctgcaaccaggacatggacgagtgctccatcggtgcgaatccctgcgagcac
tttggcaagtgtgtgaacacagagggctccttccagtgtcagtgcggccgtggctacaca
gggccgcgctgcgagatcgacatcaacgagtgcctgtccatgccctgccagaacgatgcc
acctgcctggaccgcatcggggagttcacgtgcatctgcatgccaggctacacggggaca
tactgcgaggtggacgtggatgagtgtgagagcaacccctgcgtgaacgatggcatctgc
agggacatggtcaacggcttctcttgtacctgtcagccaggcttcaccggcaccatgtgt
cagatcgacgttgacgagtgcgccagcacgccttgccagaacggggccaagtgcttcgac
cggcccaacggatacgagtgccgctgcgcagaaggctttgaggggaccctttgtgagagc
aacattgataactgccggcctgacccatgccaccacggcacctgcgtcgacggcatcgcc
acctactcctgcaactgtgatgccggttacacgggctaccgctgcgagaaccagctcaac
gagtgtcacagcaacccctgccagagtggcggcaagtgcgtggacctggtcaacaagtac
atctgccagtgtcagcacggcacctcaggtgtcaactgcgagatcaattttgatgactgt
gccagcaacccatgtgaatttggtatgtgcaaggatggcatcaaccgctacgactgtgtc
tgcgagcctggcttcactggcccaaagtgcaatgtggagatagacgagtgctcgtccaac
ccctgccgtaacggcggtacctgtgtggatgacgagaacggcttccactgccagtgccct
gacggcttccacccgccctactgttactccaaggtggatgagtgtgccagcaacccctgt
gtcaacggagcctgcagagaagaccccaatggctacagatgtgactgtgagcccggttgg
gtggggaaaaactgcgacctgaaccgcaacgactgcctgcccagcccgtgccagaacgcc
ggcacctgcattgaccagctgaacggcttcacctgcaagtgccgccagggcttcaaaggt
aacctgtgccagatgaatatcaacgagtgctcatcaagtccgtgtctgaactccggcacc
tgtgtggatggtgtggccagcttcacctgcctgtgtgatctgccctacaacggccccacc
tgtgctgaagtgctcactccctgctcccccaacccctgctccaaccacgcccagtgcatc
aacacacccgactaccaggggtaccagtgcaactgcttgtctggatggcaaggtcagatg
tgtactgccgatgtgaatgagtgcatcgccaacccctgcaaaaaccgcggcacctgcacc
aacacactgggggcctatgtgtgctcctgccgggccggcttcaccggggccaactgtgag
acagacatcaatgactgctcaccgaacccctgtctgaatggaggctcgtgctcagatggt
gtgaatagcttccagtgcagctgtctgcctggattcactggcccgcgctgtgcagtggag
gtgaacgagtgccagagcgccccctgcaggaatggaggcacttgcactgactacgtgaac
agctacacttgcacctgcaagcctggcttcacggggatccactgtgagaccaacatccct
gactgcactgagagctcttgcttcaacggaggcacttgcacagacaagatcaacggctat
acctgctcgtgtcgctcaggcttcaccggctcacactgccagtacgaggtgaacgagtgt
gactcgcagccttgcctcaacggtggcctgtgccaggatgccctcgagtccttccgctgc
tcctgccccaaaggctacaccggcaaccgttgccaggtcccggtggactggtgccgccgc
tccaacccttgccagaacggagggcgctgccggcagaaggacgccgccttcacctgcgag
tgcatgggcggctggtcgggccgctactgtgacatcccaggggtgtcttgcgaagtggcc
gcagctcagagaggctatcagacggacgagctctgccaccacggcgggcactgcgtcaac
acgggcaacagccactactgtaagtgcccagtcgactacacgggcagctactgcgagagc
caggtggaccactgcgaggacaaaccctgccgcaacggcgccacctgcaggggatacgtg
ggaggatacacatgcgactgcatgccaggctaccatggagagaactgtgacatggagatt
aacgagtgccagtctcacccgtgccagaatggcggcacctgcattgaccttgtggggcat
tacatctgctcatgcccacctggcactctgggtgtcctgtgtgagatcaatgaggacgac
tgctccaccccagccaggccccggggcacccccaagtgtctgaacaacggcacgtgtgtg
gaccgcgtgggcggctacaagtgcaactgcccccctggcttcactggggaccgctgtgag
ggagacatcaacgagtgcctgtccaacccctgtaaccctggcaacagcctggactgcatc
cagctgcccaacgactaccagtgcatctgcaagcctggctacacaggtcgacggtgccag
aaccgtttcagtgtgtgtgagtctcagccttgtcagaacggaggcgcctgcagcgtcacc
agcagcacagcctcaggatacacctgcacctgtcaactgggctacaccggtgccaactgt
gagcgcagcatgttgtgccgtgagctctcctgctacaacggtggcagctgcacgctgacc
acgcgcggcgcccgctgcagctgcctgcagggctacgcagggccgcagtgccagcaccgc
agcaacgagggctgctcggcgcagccctgccgcaatggcggtctgtgcaccgaagagacc
tccttccccttcttccactgccagtgccccgccggctttaccggcaagcgctgcgagcag
cccagcggacactatgctgacccgctgccaccgccaccgccacctgcctgcccgctggcc
gactgtcctggcaaggccaacgacggcgtgtgtgacaaggagtgcaacaccttcgcctgc
cgttgggacggcggcgactgctcgctggccgtcaacccgtgggccaactgtcctgacccg
cgctgctggcgagtcttcaacaacagccagtgtgacgagagctgcaacaatgctgcctgc
ctctacgacaactttgactgtcgcagtaaggagaaggtttgcaatccgatctacgagacg
tactgcatcgaccactttgccgatggcctctgcgaccagggctgcaacacggaggagtgc
ggctgggatggcctggactgcgctgtgaaggtgcccgagaaccttgcggacggtgtgctg
gttgtcacggtgctgctgccgcccgaagagctgttgcgcacgggcacggccttcctgcag
aagctcagcgccatcctgcgcaccagcctgcgtttccgcctcgaccagaacggcgaggcc
atgattcgcccatacacccgccgcgaggcacgcctcaagcgcgagctgcagcctcatcag
gaggtcattgggtccatcgtgtatctggagatagacaaccgtctgtgctctcaaggctct
gatggctgcttcccctcggctgacacggcggcggagtacctgggagccctgtctgccacg
gagatgctgcgcttcccctaccccatcaaagcagtccgcactgagcggatgcgacccgaa
gatgagttgccagagtggtccaagctcctgctggtgggcgtggcggccgtcttcctgctg
gtcatcctggtggtgggcatgctgatcgcgcggcgcaagcgggagcacagcacactctgg
ttccccgagggcttcttcctcaagaaggacaccagcagcaacaagaaccgcagggagccg
gtgggacaggatgccctgggcatgaaacacatgccaaagacagtggaggagtctcttctg
ggagaccacagtgaccagtggattgatacagactgccctgaggccaagagactgaaggtg
gaggagcccagcatgctgtcggacagtgaggacccggtggactccaggcagtggacgcag
caccatctggcagccgccgacatccgcatgccgccctccatggcactcacgcctccgcag
ggagagtttgacactgactgcatggacgtcaacgtccgaggacctgacggtttcactcct
ctcatgctggcgtcattctgcggaggcggcctggagcccgaggtggcagaggaagaggag
gaggagtcatccgccaacataatctctgacctcatctaccagggcgcctcgctggccgcc
cagacagaccgcaccggggagacggccctgcacttggccgcccgctatgccagagccgac
gccgccaagaggctgctggatgccggagcggacgccaacgcacaggacaacaccggacgc
tcaccactgcacgcagcggtggccgctgatgcccaaggagtattccagatcctgatccgt
aaccgtgccactgacctggacgcccgcatgtacgacggctccacggccctcatcctggct
gcccgcctggcagtggagggcatggtggaggagctcatcacctgccacgccgatgtcaat
gccgtcgacgaactgggtaaatctgccctgcactgggctgcagcagtcaacaacgtggaa
gccaccatcgccctgctgaagaacggagccaacaaagacatgcaggatctgaaggaggag
actcctctgttcctggcggctcgcgagggcagctgcgaggcggtgaaggtgctcctggcc
cactttgccaaccgcgagatcaccgaccacatggaccggctgccgcgcgacatcgctcaa
gagcgcatgcaccacgacatcgtgcagctgctcgacgagtacaacacggtgcgtagcccg
caggggcacagcgccgccgcccaccacctggccgtggccgccggcgggcacacgctctcg
ccgctcatgtgcccacccagcagcttcatgcaaggcctcaagaccactccgcagggcaag
aagagccggcgtcccagcgccaaaggctcgggcggcatgatcgggccgcacggtggcaac
atcggcctgaaggagtccgccaaaatgcgcaacaagaagctgacgctagacatgcagagc
gccctgctggagagctcggtcacgctctcgcccgtcgactcgctcgactcgccgcacggc
ggcaccagcaacgccggctacatgaccaaccccacctcgccggtcgccatgccctcgccc
ggcctcttccacacctccatgtcggtgcccaacactcccatggtgcacagcgccatgctg
gacggcagtgggcccttcgccgtctccctggcacagctcaatgacctgggtgctggggga
gacggcgggctctcaatgcacgcccgcgtctccatggcatcagcggcagtggtgaacccg
cacagctacgtgctgaacgccggccagctgggcatgaccatgggcatggtgaacccggtg
agcgtgcccttcgactggcacagccgcatatccgcctcgcagtgcggccaggtgaacatg
gtgcaggccggcatgatgccccagacgcccaccatgcagcagggtggcctgctcatgcac
cagcagatgttccgtggtgctcagcccatgctccagccaacgcccatctcctccaccccc
accgtcagccccatcaagctggcctccatcgccgagcagcagccgcctcagcaccagcct
cagcaccacagccacgtcctggcacgcatgggcacctccagccctcccaccccccagcag
acgcagcccccaacagccttctaccagcagtcccctcagcagccccagccaaccccccag
gcagcagcagtggcggcccagccgccccaggctcaggccccccagcccggaggcagcagc
acgggcctggaggattaccccaccccaccctcccagcacagctacacccccaccatggat
gccacacccaagcattacttgcgcctgcccagcgagcacccctacctgaccccctcccca
gagtcgccagagccctggtccagcccctccccgcagtgcgtgtctgactggtctgagtcc
accccgagcccggccgtgtccggacccgctcagacccagatcccccacgtccaggagtcc
aacggaaagatgcaggtgttcgcgtga
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integrated database retrieval system
