Clupea harengus (Atlantic herring): 105905749
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Entry
105905749 CDS
T09045
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00270
Cysteine and methionine metabolism
char01100
Metabolic pathways
Module
char_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
105905749 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105905749 (dnmt1)
03032 DNA replication proteins [BR:
char03032
]
105905749 (dnmt1)
03036 Chromosome and associated proteins [BR:
char03036
]
105905749 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
char02048
]
105905749 (dnmt1)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
105905749 (dnmt1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
105905749 (dnmt1)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
105905749 (dnmt1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105905749 (dnmt1)
Prokaryotic defense system [BR:
char02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
105905749 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
105905749
NCBI-ProteinID:
XP_031431512
Ensembl:
ENSCHAG00000015979
UniProt:
A0A6P8G790
LinkDB
All DBs
Position
1:30269918..30288160
Genome browser
AA seq
1516 aa
AA seq
DB search
MPTKTSLHLPEDVRERLHVLDKDGDNLSDEECVKEKLRLLQEFLLTDTQEQLKNLESKLK
SEELSVEGYISAVKAVLKQVVCLDKDGQGDCVEKNGQLNGCAENGNGNHKDNGEVESVMD
TQEEGDSMRSPSAPKGKGRRSKSDPEPRKSPAGSRVTRNSGKQPTILSMFSRVPKRKCDE
MENGDSTNGVAEEKSQEGDPDEVKDEVHEEKRLKLETDEKPVLRESTTEAKPVAPAKAPP
PKCPDCRQYLDDADLKFFQGDPDNALDEPEMLTDERLSLFDSNADGFESYEELPQHKITN
FSVYDKRGHLCPFDSGLIEKNVELYFSCGVKPIYDDNPCMDGGVPAKKLGPINAWWITGF
DGGEKALIGFTTAFADYILMDPSEEYSAIFALMQEKIYMSKIVVEFLQKNQDATYEDLLN
KIETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAG
VTLGKRRATRRQAIRHPTKIEKDKGPTKATTTKLVYQIFDTFFSDQIDQINKDGGLKRHR
CGVCEVCQSPDCGKCSACKDMLKFGGSGRSKQACQKRRCPNLAVKEAEEDENIDEEEVLP
PLKPTSKVMAAARKKKKQSQTKKSWVGEPVRVEGKKKYYMKVRVDDTVLEVGDCVSVSPD
DPSRPLFLARITALWEADEKMFHAHWFSRGTDTILGETSDPLELFLVDECEDMNLNFIAG
KVNVIYKAPSDNWFMEGGVEGEEKVVEDDGVSFYYQLWYEHDFARFETPPKSTPPEDCKY
KFCASCTRSAERVERETPRAFEPLANQDSDSKTFYAMACLKGHQFRVGDGVYLLPESFDF
GVKAASPVKKSHRKEDKDEEEYPEYYRKSSDYIKGSNQDAPQAFRVGRIKEIFCTRRTNN
KSNSSEVKLRLYKFYRPENTHKGLKAGYHLDINQLYWSDEEVTVDMSEVQGRCRVEYEAD
LVESLQDYSSRGPDHFYFIEAYSAKTKNFEDPPNHARLVVNKGKGKGKGKGKGKGKSVSA
QDSAEPEAQEQRTPKLRTLDVFSGCGGLSEGFHQADIAETLWAIEMWDPAAQAFRLNNPG
TTVFTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKF
KNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQ
YGVAQTRRRAIILAAAPGQKLPRYPEPLHVFAPRACSLSVVVDEKRFVSNITRGNGGIYR
TITVRDAMSDLPEIRNGAAGLEISYNGEPLSWFQRHIRGSQYQPILRDHICKDMSSLVAA
RMRHIPLAPGSDWRDLPNKEVRLTDGTMTRKLRYSHSDKKNGRSSTGALRGVCSCFGGKP
CDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQ
HRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGIEIKKCVQEQMKEDA
TDPVKEVKQEKMELSE
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccaagacctcattgcatctaccggaggatgtcagggaacggctacatgtgttg
gataaagatggggataacttgtcagatgaggagtgtgttaaagagaagctaaggttattg
caagagtttctgctcactgacactcaggaacaactgaaaaaccttgagtccaagctaaag
agcgaggagctgtctgttgaagggtacatttctgctgttaaagcagttttgaagcaggtg
gtctgtttggacaaagatggtcagggagactgtgtggaaaagaacggccagttgaatggc
tgtgcggaaaatggcaacggcaaccacaaagacaacggggaagtggagtcggtcatggac
acccaggaggagggagactccatgaggtctccaagtgctcccaagggtaaagggcgtcgg
agcaagtccgaccctgaacccagaaagtctccagctggctcaagagtcacccgaaactcc
ggaaagcagccaaccatcttatcaatgttctcaagagttccaaagcggaagtgcgacgag
atggagaatggagattccacaaatggtgttgcggaggagaagagtcaggaaggagaccct
gacgaggtaaaggacgaggtccatgaagaaaagcgtctgaaattggaaactgatgaaaag
ccagtcttaagggagtcaaccactgaggccaaacctgtggctccagccaaggcgccaccc
cctaagtgtcctgactgcaggcagtacctggatgatgctgacctcaagttcttccaggga
gaccctgataacgctctggatgaaccagagatgcttacagatgagcgcctttccctcttt
gactcgaatgcggacgggttcgagagctacgaggagctgcctcagcacaaaatcaccaac
ttcagtgtctatgacaagcggggtcacctctgtccatttgactcgggcctcattgagaaa
aatgtggagctgtacttcagctgtggtgtcaagcccatttatgatgacaacccgtgtatg
gatggtggggtgcctgctaagaagcttggacccattaatgcttggtggattacgggcttt
gatggcggagagaaagcacttattggatttactacagcttttgctgactacatcctcatg
gaccccagtgaggaatactcggccatcttcgcactcatgcaggagaagatctacatgagc
aagattgtggtggagttcctgcagaagaaccaagatgccacttatgaagaccttctcaac
aaaatagagaccaccgtgccccctgctggccttaacttcaaccgcttcacggaggacact
ctcctgcgccacgcccagtttgtggtggagcaggtggagagctacgacgaggccggcgac
tcggacgagcagcccatcatcgtcacgccctgcatgagggacctcatcaagctggctggc
gtcaccctgggcaagaggcgagcgaccaggaggcaagccatccgtcaccccactaagatc
gagaaggacaagggccccaccaaagccaccaccaccaagctggtctaccagatcttcgac
accttcttctcagaccagattgaccagatcaacaaggatggtgggttaaagaggcatcgc
tgtggtgtgtgtgaggtgtgccagtcccctgactgtggcaagtgctccgcctgcaaggac
atgctgaagttcggtggcagcggtcgcagcaagcaggcctgtcagaagagaagatgtccc
aatctggcagtgaaggaggcggaggaggatgagaacattgacgaggaggaagtgctgccc
ccgctgaagcccacgtcaaaggtcatggccgcggccaggaagaagaagaagcagagccag
accaagaagtcctgggttggagagcctgtccgagtggagggcaagaagaaatactacatg
aaggtgcgtgtggacgacacagtgctggaggtgggagactgtgtgtctgtcagtcctgat
gacccgtccaggccccttttcctggccaggatcacagcgctgtgggaggcggacgagaag
atgttccacgctcactggttctcccgtggtaccgacactattctgggtgagacctcggac
cccctggagctcttcctggtggatgagtgcgaggacatgaacctgaacttcatcgctggc
aaagtcaacgtgatctacaaggcgccttccgacaactggttcatggagggtggcgtggag
ggcgaggagaaggtcgttgaggacgatggcgtaagcttctactaccagctgtggtacgag
catgactttgcccgcttcgagactcctccaaagtctaccccaccagaggactgcaaatac
aagttctgtgccagctgcacgcggagcgctgaacgcgtcgagcgggagacccctcgtgcc
ttcgagcccctggcgaatcaggacagcgactctaaaaccttctatgccatggcctgcctg
aagggacatcagttcagagtgggagacggtgtctacctgctgcctgagagttttgatttt
ggcgtaaaggcagcgagcccagtgaagaagtcgcacaggaaggaggacaaggatgaggag
gagtaccctgagtactacaggaagtcctctgactacatcaagggctccaaccaggacgcc
ccgcaggccttccgtgtgggccgcatcaaggagatcttctgcaccaggcgcaccaacaac
aagtccaactcctctgaggtcaaactgcgcctctacaaattttacaggccagagaacact
cataagggattaaaggctggctaccacctggacatcaaccagctgtactggagcgacgag
gaggtgaccgtggacatgtcggaggtgcagggccgctgtcgggtggagtacgaagcggac
ctggtggagagcctgcaggactactccagcagaggccccgaccacttctactttattgag
gcctacagcgcaaagaccaagaactttgaagatccacccaaccatgctcgcttggttgtt
aacaaaggcaagggaaaaggcaagggcaaagggaagggcaaagggaagtctgtctccgct
caggattctgcggagccagaggctcaggagcagaggacccccaagctgcgcacgctggac
gtgttctcaggctgcggagggctgtctgagggattccaccaggccgatatcgctgagacg
ctgtgggccattgagatgtgggaccctgcagcccaggccttccgcctcaacaacccgggc
accacggtgttcacagaggactgcaacgtgctgcttaagctggtcatgtccggggagaag
accaactcgctgggccagaagctgccccagaagggcgacgtggagatgctgtgcgggggg
cctccatgccaaggcttcagcgggatgaaccgcttcaactcacgcacatactcaaagttc
aagaactccctggtggtgtcctatctaagttactgtgactactaccgacccaagttcttc
ctgcttgagaacgtgaggaacttcgtgtcgttcaaaagctccatggtcctaaagctgacc
ctccgctgccttgtgaggatgggctaccagtgcacatttggagtactccaggcagggcag
tacggtgttgcccagacgaggcgtagggcgatcattctggcagctgccccagggcagaag
cttcctcgttaccctgagcctctgcacgtgttcgccccgcgcgcctgctccctcagcgtg
gttgtggacgagaagaggttcgtcagcaacatcacgaggggtaatggtggtatttaccgc
accatcaccgtgcgagatgccatgtctgacctcccagagatccgtaatggcgccgcgggc
ctggagatctcctacaacggcgagccgctgtcctggttccagaggcacatccgaggctcc
cagtaccagcccatcctcagggaccacatatgcaaggacatgagctcgcttgtggccgcc
cgcatgcgtcacatccccctggcccccggctcggactggagggacctgcccaacaaggag
gtcaggctgaccgacgggaccatgaccaggaagttgcgctactcgcactcggataagaag
aacgggcgcagcagcactggtgcactgaggggcgtgtgcagctgctttggaggaaagcca
tgtgacccagccgacagacagttcaacaccttgatcccctggtgtctgcctcacacgggc
aaccgccacaaccactgggccgggctctatggcagactggagtgggacggcttcttcagc
accacagtaaccaaccctgagcccatgggcaagcagggtcgggtcctgcatcctgagcag
caccgcgtggtgagtgttcgggaatgcgcccgctcgcagggattcccagacacctaccgg
ttcttcggaaatgttctggacaaacaccgacaggtcgggaatgccgtgcctcctccacta
tccaaagccattggcattgagattaagaaatgtgtccaagagcagatgaaggaggatgca
acagaccctgtgaaagaggtgaaacaggagaaaatggagctctctgaatga
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