KEGG   Clupea harengus (Atlantic herring): 105905788
Entry
105905788         CDS       T09045                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105905788 (rbm20)
Spliceosome [BR:char03041]
 Complex A
  Other components
   Complex A specific factors
    105905788 (rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met RRM_1
Other DBs
NCBI-GeneID: 105905788
NCBI-ProteinID: XP_031419720
Ensembl: ENSCHAG00000003530
UniProt: A0A6P8F786
LinkDB
Position
26:complement(4504565..4548654)
AA seq 1149 aa
MEKMRNGQNNMSGKGHAGFPGAKGAVDRFQSANVLDNLDKKNLPLGAHLSGAAQNPFLLT
PASLQLAQLQAQLTLQRLKLAQSAVGGHPAATAASVLNQVLSNVTMSQSLFNPLRGSATM
VSGSQGGHGGHAGFPPPSLPFPPPNSALGTLVGGGFPQKPGGIRHNHPPPNTSQAPGLQN
YGKKGSTFPSDIDHQPQYGYLGGASVAPNKGNEGKYNAQAKSNQGTYQRDYFVPDSQGQV
SGFGCGVGGGGTSGQTLEAYPGSAQKEPWKHPGGFSHGGKLDVPPGGAGGGGGGGNTWVP
AGQQFCPRVELYNPEEPTTDPKFSPGGPGFGAGGAQGFVGYSQQLQGGEDMSRLVRSPTP
LQPHQFNDFHAVTPTQLPHQCTICEKTVYNLKDWDQHVKGKLHLQNLALYTEGSAAGATH
YPTTSEGCLSTALASTMAYSSTASLDASSGTIASYLPTAAMKSFPLSGVGFTSHQPGTKF
PQRKPFPGRVVHICNLPEGSCTENDVINLGIPFGKVTNYILMRSTHQAFVEMAYVEAAQA
MVQYYQLQPATINNQKLLIRMSKRYKELQLKKPGKDVDSIIHDINSQREKDETQEPDRYV
PERPRSRSPIRGSLSPRSHSPSFTSCSSTHSPQGAPCRSEWSNGMGPRRPSWDWTPHPRR
EDDRERERDRERERDEEHWRNGEDDRPNGRLPDRRKSYMKAGDRISPRTMDDRGGRDWYC
RGSPQGPTFPSYRDMDDFYKKEHPYKSDKPSRLPYPRHELKTKRREASDYHKPRHSESED
MSEEPIPPRSPEDRRQGSPGRGRSKKQTRRQPAEKDEKDPNNNGQHQREESSKERSVSPP
SVSKNTDATEVDQDKESGAEESESDDTEGESWYPKNMEELVTVDEVGEEEDSIIEPDILE
LQEESLREETSSAGLTEAKLDSNPTASLDTQRGDSQDGSPPREDPEDAPAATSPKETKED
KSTSEPHSSDLNHFPNQEFKVALEETCSTPDMSGAEAPKSAPDCLSNHNGECDSAKPAEP
NRDVDTGKSGHVTENLHKDTQIKEDGQCQRKDLNSVHGHSPLRIDTEAPSPSREQEKVIN
EHSIPLGVEFIVPRAAFYCKLCGLFYSSEDVAKTTHCRSTVHYRNLQKYLSQLSEGSLLI
GQMDTFGSE
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggagaaaatgaggaacggacagaataacatgtcaggaaaaggccacgcaggattccca
ggagcaaagggcgccgtcgaccgcttccagagtgcaaatgtgttggataaccttgacaag
aagaacctgcctctgggtgcccatctgagtggggcggctcagaacccttttctcctgacc
cccgccagcctgcagcttgcccagctccaagcccagctcacgctacagcgacttaaacta
gcccagagtgctgtgggagggcaccctgcggccacggctgcctctgtcctcaatcaggtc
ctctctaatgtcaccatgtcccagtcgttgttcaaccccctccgggggtcagccactatg
gtgagcggatcacagggaggtcatggaggtcatgctgggttcccgcccccttcgctgcct
ttccctcctccaaattcagctttggggacactggtagggggagggttcccccagaaacca
ggaggaattaggcacaaccaccccccaccaaataccagtcaggcacctggtcttcagaat
tatgggaagaaagggtcgacatttccctcagacattgaccatcaaccccagtatggctac
ctgggaggggcgtctgtggcgcccaacaaggggaatgaggggaaatataatgcccaggcc
aagagcaaccagggaacctaccagagggattactttgttccagattctcagggtcaagtg
tctggttttgggtgtggagtaggtggaggtggaaccagtggtcagacccttgaggcttat
ccaggttcagctcaaaaggagccctggaaacatccaggggggttttcccatggtgggaag
ttggatgtacccccaggaggtgccggtggtgggggaggtgggggtaacacctgggtacct
gctgggcaacagttttgtcccagagtggagctttacaacccagaggagccgactactgac
ccgaagttcagcccgggcggtccagggttcggtgctggtggtgcacagggatttgtggga
tactcacagcagctgcaaggaggggaggatatgagcagactggtcaggagccccacccca
ctacaaccccaccagttcaatgactttcatgccgttacaccaacacagctgccacaccaa
tgcaccatctgtgagaagacagtctacaacctaaaggactgggaccagcacgtgaaagga
aagctccatctgcagaacctcgctctctacacggaaggctcggcagctggagccactcac
tatcccacgacatccgaaggatgtctcagcacggcgctcgctagcaccatggcatattcc
tctacagcaagtctagatgcatcttcaggaactattgcctcgtatttaccaactgcagcc
atgaagtcatttcccctgtcaggggttggatttacctcacaccaacctgggacaaagttc
ccccagagaaaacccttccctggtcgggtcgtccacatctgcaaccttcctgagggcagt
tgcacagagaatgatgtcatcaacctgggcatcccatttggcaaagtcaccaattatatt
ctcatgcgttccacacatcaggctttcgtggagatggcttatgtcgaggcagcacaagcc
atggtccagtattatcagctccaaccagccacaattaacaaccagaaactcctgattcgg
atgtcaaagcgttacaaagaattacaactcaagaaacccggaaaggatgttgactccatt
attcacgatatcaactctcagagagaaaaagacgagactcaagaacctgaccggtatgta
ccagagcgaccaaggtcccgcagcccaattcgaggttccttaagcccacgctcgcacagc
ccaagcttcacatcgtgcagctccacgcatagtccacagggggcaccctgccggtctgaa
tggagcaacggcatgggcccacgtcggccctcctgggactggacaccccatccccgtagg
gaagatgatcgggaacgggaacgggatcgtgaacgagaacgggacgaggagcactggagg
aatggtgaagatgacaggcccaacggaaggctgcctgaccgcaggaaatcctacatgaaa
gctggggaccgtatcagccccaggactatggatgaccggggtggcagagactggtactgc
cgaggcagccctcagggtcctacattcccctcctacagggacatggatgacttctacaag
aaggagcacccttacaaatcagacaagccctccaggctgccatatccacgacatgaactg
aagacaaagaggagggaggcatcagactaccacaagccaaggcactcagagtctgaggat
atgtctgaggaacccatcccacctagaagtccagaggacagaaggcaaggatcaccaggg
aggggaagaagcaagaaacaaaccagaagacaaccagcagagaaggacgagaaagatcca
aacaacaatggacaacaccaaagggaggaatcatcgaaggagaggtcagtttctcctccc
agtgtgagcaagaatacagatgctacagaagttgaccaggacaaagagagtggggctgaa
gagtcggagagtgatgacacggaaggagagtcctggtacccaaagaacatggaggagctt
gtgacagtggatgaggtcggagaagaggaagactctataattgagcctgacatactggaa
cttcaggaagagtctctcagagaggagacttcatctgcaggcctgactgaggccaaacta
gactccaacccaacagcgtccttggatacacagagaggggatagccaggatggctcccct
cctcgggaagaccctgaggatgccccggcagccacttctcccaaggaaaccaaagaggac
aaaagcacatcagagcctcacagctcagacctcaatcacttccccaatcaggagtttaag
gttgccttggaggagacatgctccacaccagacatgagtggtgctgaagctcccaaatca
gcaccagactgcctttcaaaccacaatggcgaatgtgactctgccaagcccgcagagcca
aacagggatgttgacacaggaaagtccggtcatgtgactgagaatttacacaaagacaca
cagataaaggaggatggccagtgccagaggaaagacctcaattcagtacatggtcattct
ccacttcggatagacactgaggccccttcgccatcccgggaacaagaaaaagtgatcaat
gagcacagtataccactgggtgtggagtttattgtgcctagagcagccttctactgtaaa
ctgtgtgggctcttctacagcagtgaggacgtggccaaaacaacacactgcagaagcacc
gttcactataggaatctccagaaatacttgtctcagctgtcagaggggagcctactcatt
ggccagatggacacgtttggctcagaatga

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