Clupea harengus (Atlantic herring): 105905794
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Entry
105905794 CDS
T09045
Name
(RefSeq) son of sevenless homolog 1 isoform X1
KO
K03099
son of sevenless
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04012
ErbB signaling pathway
char04068
FoxO signaling pathway
char04150
mTOR signaling pathway
char04510
Focal adhesion
char04540
Gap junction
char04810
Regulation of actin cytoskeleton
char04910
Insulin signaling pathway
char04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105905794
04012 ErbB signaling pathway
105905794
04068 FoxO signaling pathway
105905794
04150 mTOR signaling pathway
105905794
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105905794
04540 Gap junction
105905794
09142 Cell motility
04810 Regulation of actin cytoskeleton
105905794
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
105905794
04912 GnRH signaling pathway
105905794
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RhoGEF
SOS1_NGEF_PH
PH
PH_19
PH_10
RHG20_PH
DUF6018
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
105905794
NCBI-ProteinID:
XP_031419986
Ensembl:
ENSCHAG00000014795
UniProt:
A0A6P8F7H6
LinkDB
All DBs
Position
26:complement(4291960..4328601)
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AA seq
1321 aa
AA seq
DB search
MQGTQLQYDFFSEENAPKWRGLLVSSLNKVLNQVHPKLSSQEEALQYIEELILLLLSMLC
QAQPRTVQDVAERVQKSFPHPIDKWAIADAQAAIEKRKRRNPLALPVDKIHPLLKEVLGY
KIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEISQQDITVAMCADKVLMDMFHQDE
EDISVFPLMDEEPSSSEEQTYYDLVKTVMAEVRQYLRDLNLIIKVFREPFASNTMLFSHH
DVENIFSRIVDIHEVTVKLLGLIEDTVEMTDEGSPHPLVGSCFEDLAEELAFDPYESFAQ
DILRSGFHDHFLSQLSKPGAAFYLQSICEGFKEAVQYVLPRLLLAPVYHCLHHFEILKQL
EEKSEDEEDKECLKQAITALLNLQSSMERICSKSLAKRRLSESACRFYSQQMKGKHLAIK
KMNEIQKNIDGWEGKDIGQCCNEFIMEGALTRVGAKHERHIFLFDGLMICCKSNHGQPRL
PGASTAEYRLKEKFFMRKVQINDKDDKEGEYRHAFEIILKDGNSVVFAAKSAEEKNGWMA
ALISLQYRSTLERMLDSAMFQEEKEEQMRLPGAEVYRFAEPDSEENLVFEENVQAKSGIP
IIKAGTVLKLIERLTFHMYADPNFVRTFLTTYRSFCKPQELLDLLIERFDIPEPKPTEAD
QMALENGDQPLSAELKRFRKEFVQPVQLRVLNVCRHWVEHHFYDFERDPQLLRRLEEFIG
TVRGKAMRKWVESITKIIQRKKQVQANGPSHNITFESSPPPIEWHISKPGQIDQFDLMTL
HPIEIARQLTLLESEFYRSVQPSELVGSVWTKEDKELNSPNLLRMIRHTTNLTLWFEKCI
VETDNLDERGLVVARIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFETIPSRQRK
ILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNILKTEEGNPDFLKRHGKELINFS
KRRKVAEITGEIQQYQNQPYCLRVENDIRKFFENLNPMEDKMEKEFTDYLFNKSLEIEPR
NARTLPRFPKKYNCPLKSPGTRVTSVRPGTMRHPTPLQNEPRKISYSRIPDSEMEGAASA
PNSPRTPLTPPPASAASSSTDICSVFDSPLGPSSPFHSRSSSVSSMVYRSTEDAAVPPPV
PPRRRPESAPAESSPSKMMSKHLDSPPAVPPRHPTTKVYSPRYSLPERTSVSDAPDSPPT
LPPREPVRTPDVFSSSPLHLQPPPQGRRAGPDTGQTFFPPNSPFNPLPPQTPSPALGPRK
QLAPTPLDCEAVAGPPGPPVPPRQSTAQTIPKLPPKTYKREPTHSSFPRDGFPLLENVNP
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacacagctacagtacgacttcttcagcgaggagaacgcaccgaaatggcgg
gggctgctggtatcgtctctaaacaaggtcctgaaccaggtgcaccccaagctctcatcc
caagaggaggccctgcagtacatcgaggagttgatcctgctgcttctgagcatgctctgt
caggcccagccacgcactgtgcaggatgtggccgagcgtgtgcagaagagtttcccccac
cccatcgataaatgggccattgctgacgcccaggctgccatcgagaagaggaagaggagg
aatcctctcgccctaccagtggataaaatccaccctttactcaaggaggtacttggttat
aaaatcgaccatcaggtgtctgtgtacatcgtggctgtgctggagtacatctctgctgat
atcctgaagctagctgggaactatgtacgcaacatccgtcactatgagatctctcagcag
gacatcactgtggccatgtgtgcagacaaggtgctgatggacatgttccaccaggatgag
gaggacattagtgtcttccccctgatggacgaggagccgtcatcatcagaggagcagact
tactatgacctggtcaaaactgtcatggcagaagttcgtcagtaccttcgcgacctcaat
ctcatcattaaggtgttccgggagcccttcgcgtccaacaccatgctgttctcacaccat
gacgtggagaacatcttcagccgtattgtggacatccatgaggtgactgtgaagctgctg
gggttgatcgaggacaccgtggagatgacggacgagggaagcccacaccctttagtgggc
agctgcttcgaggacctggctgaggagctggcttttgacccctacgagtcttttgctcag
gacatcctgcggagtggcttccacgatcacttcctgagccagctctcaaagccgggggcc
gccttctaccttcagtctatctgtgagggctttaaggaagccgtccagtatgtcctacct
cgcttgctgttggctcctgtgtaccactgcctccatcactttgagatcttaaagcaactg
gaggagaaaagtgaggatgaggaagataaagagtgtctgaagcaggccatcactgcgctg
ctcaatctccagagcagcatggagaggatctgttccaaaagcctcgctaagaggaggctg
agcgagtcagcctgccggttctacagccagcagatgaagggcaaacacctggccatcaag
aagatgaacgaaatccagaagaacatcgacggctgggaaggcaaagacatcggtcagtgc
tgcaacgagttcatcatggagggggctctgacgcgggtgggggccaaacacgagcggcac
atcttcctgttcgacggcctgatgatctgctgcaagtccaaccacggacagccgcggctc
ccgggggccagcaccgctgagtaccgcctcaaggagaagttcttcatgcgcaaggtgcag
atcaacgacaaggacgacaaagagggcgagtaccggcacgccttcgagatcatcctgaag
gacggcaacagcgtggtgttcgccgccaagtcggccgaggagaagaacggctggatggcg
gccctgatctcgctgcagtaccggtccacgttggagcgcatgctggactcggccatgttt
caggaggagaaggaggagcagatgcgcctccccggggcggaggtgtaccgcttcgctgag
cccgactccgaggagaacttggtgttcgaagagaacgtgcaggccaagtctggcatcccc
atcatcaaagccggcacagtgctgaaactcattgaaagactcactttccacatgtatgca
gaccccaattttgtgagaaccttcctaacaacctacaggtccttctgcaaaccccaggag
ctgcttgatctgctcatagagaggtttgacatccctgagcctaagcccactgaggccgat
cagatggccttggagaacggagaccagcccctgagtgctgaactcaaacgctttcgcaag
gagtttgtgcagcccgtgcaacttagagttctgaatgtatgtcggcactgggtggaacac
cacttctatgactttgagagggaccctcagctactgcgccgcctggaggagttcattggc
acagttcgagggaaggccatgaggaagtgggtagaatcgatcactaagatcatccagcgg
aagaagcaggttcaggccaacgggccaagccacaacatcacctttgagagttcccctcct
cccatcgagtggcacatcagtaaaccgggccagatcgatcagtttgatctcatgactctg
caccccattgagatcgcccgccagctcacgctcctggagtcagagttctacaggtctgtc
cagccgtcggagctggtgggcagcgtgtggaccaaagaggacaaggagttgaactcgccc
aacttactgcgcatgatccgccacaccaccaatctcactctgtggtttgaaaagtgtata
gtggagactgataacctggatgagcgtggcctggtggtggcccgcatcattgagatcctg
caggtcttccaagaactcaataacttcaacggtgtgctggaggtggtcagcgccatgaac
tcctctccagtctacaggctggaccacacgtttgagacaatcccgagcaggcagaggaag
atcttggaggaagcccacgaactgagtgaagatcattacaagaagtacctggccaaactg
cgctccatcaacccaccctgtgtgcccttctttgggatttatctgacaaacatcctgaaa
acagaggagggtaatcctgacttccttaagagacacggtaaagagctgatcaacttcagc
aagcgaaggaaagtggcagagatcacaggagaaatccaacagtaccagaaccagccctac
tgtctccgtgtggagaatgatatacggaaattctttgaaaacctcaatccaatggaggac
aaaatggagaaggaattcactgactatctctttaacaaatctctagagattgagcctcgc
aatgcccgcactctgccacgatttcccaagaagtacaactgccccctgaagtcccccggt
acgcgggtcacgtcggttcgtccggggaccatgcgccaccccacgcccctccagaacgag
ccgcgcaagatcagctacagccgcatccctgacagcgagatggagggtgcagcctccgcc
cccaactccccccgcacccccctcaccccgccacccgcctccgcagcctccagcagcacc
gacatctgcagtgtcttcgactcgccactaggaccctcaagccccttccattccagatcc
tcgtccgtctcctccatggtgtaccggagtacagaagacgctgctgttcccccgcctgtt
cccccccgcagacgtcctgagtccgcccccgcagagtcgtctccctcaaagatgatgtca
aagcacttggacagccccccagccgtccccccccggcaccccaccactaaggtgtactct
ccacgctactccctgcctgagcgcacctccgtgtccgacgcccccgacagcccccccacg
ctgccccccagggagcccgtcagaacgccggacgtcttctccagctccccgctgcacctg
cagccccctcctcaaggccgccgggcgggacccgacacgggccaaaccttcttccccccc
aactccccgttcaaccccctccccccgcagacgccctcccccgcactgggcccccgcaaa
cagctggcccccaccccactagactgtgaagcagtagcgggccccccaggaccccccgtg
ccccccaggcagagcactgctcagaccatccccaaactcccccccaagacctataaaagg
gagccaacccactcttcattcccccgggatggcttccctctcctggagaatgtcaacccc
tcttag
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integrated database retrieval system
