Clupea harengus (Atlantic herring): 105905815
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Entry
105905815 CDS
T09045
Name
(RefSeq) heat shock 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char04010
MAPK signaling pathway
char04141
Protein processing in endoplasmic reticulum
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105905815
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105905815
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105905815
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105905815
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105905815
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105905815
03009 Ribosome biogenesis [BR:
char03009
]
105905815
03110 Chaperones and folding catalysts [BR:
char03110
]
105905815
04131 Membrane trafficking [BR:
char04131
]
105905815
03051 Proteasome [BR:
char03051
]
105905815
03029 Mitochondrial biogenesis [BR:
char03029
]
105905815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105905815
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
105905815
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19 complex
105905815
Complex C
Prp19-CDC5 complex
105905815
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105905815
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP70 / DNAK
105905815
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
105905815
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
105905815
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105905815
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105905815
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
105905815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DUF1464
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
105905815
NCBI-ProteinID:
XP_031419417
UniProt:
A0A6P8F8E4
LinkDB
All DBs
Position
26:complement(4989474..4992200)
Genome browser
AA seq
647 aa
AA seq
DB search
MSSAKGISIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDSVVQSDMKHWPFTVISDGGKPKVQVEYKGENKTFNPEE
ISSMVLVKMKEIAEAYMGQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGTTGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKFKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLYEGIDFYTSIT
RARFEEMNSDLFRGTLEPVEKALRDAKFDKAQIHDIVLVGGSTRIPKIQKQLQDFFNGRD
LNKGINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRSVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIEKMVQDAEKYKAEDDTQREKIAA
KNSLESYAFNMKSSVEDENMKGKISEEDKKTVVEKCNQAISWLENNQLADKDEYEHQLKD
LEKVCNPIISKLYQGGMPGGMPAGGCGAQARSGAGASSQGPTIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagcaaaaggtatttccattggtattgacctgggtaccacctactcctgcgtt
ggggtgttccagcatggaaaagtggagatcattgccaacgaccagggcaacagaaccacc
ccgagttatgtggccttcacagacacagagaggctgattggtgatgctgcaaaaaatcag
gtggccatgaaccccaacaacactgtctttgatgccaagcgtctcattggacgaaagttt
gatgattccgttgttcagtctgacatgaagcactggcccttcacagtcatcagtgatggg
ggaaagcccaaagttcaagtggagtacaaaggtgagaacaaaacatttaacccagaagaa
atctcctccatggtcctggtcaagatgaaggagattgctgaggcctacatgggacagaaa
gtaaccaatgcagtcatcaccgttcctgcttacttcaatgactcccagcgccaggccacc
aaggacgctggcgtgatcgctggactgaatgtgctgaggatcatcaacgagcccacggca
gcagccattgcttatggactggacaaaggcacgaccggtgagcgtaacgtcctcatcttt
gacctaggtggtggtacttttgatgtttctatcctaaccattgaagatggcatctttgag
gtcaaagccactgctggagacactcacctgggtggggaagactttgataatcgcatggtg
aatcactttgtggaggagttcaagaggaaatttaagaaagacattagccagaacaagagg
gcactgaggaggctgcgcacagcatgtgagagggccaagaggacactgtcctccagctcc
caggccagcattgaaatcgactctctttatgagggcattgatttctacacctccatcacc
agagctcgctttgaggagatgaactccgacctcttcaggggaacccttgagcctgtggag
aaagccctgagagatgccaagtttgacaaggcacagatccatgacattgtcttggtggga
ggttccaccagaatccctaaaattcagaagcagctgcaggatttcttcaatggaagggac
ctgaacaagggcatcaaccctgacgaggcagtggcctatggtgctgcagttcaggctgcc
attctcatgggtgacaagtctgagaacgtccaggacctactgctgctggatgtggccccc
ctgtctctgggcattgagacggctggaggtgtcatgactgccctcatcaagcgcaacacc
accatccccaccaaacagacccagaccttcaccacctactcagacaaccagcccggggtt
ttgatccaggtgtatgagggagaaagagccatgaccaaagacaacaaccttttgggcaag
tttgagctgacagggattccaccggccccacgcagtgtccctcagattgaggtgaccttt
gacattgatgccaatggaatcctcaatgtgtcagctgtagacaaaagcactggcaaagag
aacaaaataaccatcacaaatgacaaaggcaggttgagcaaggaggatattgagaaaatg
gtacaggatgcagagaagtacaaagcagaagatgacactcagagagagaagattgctgcc
aagaactccttggagtcctacgcattcaacatgaagagcagtgttgaggatgagaacatg
aagggcaaaatcagtgaggaggacaagaagacagttgtggagaagtgcaaccaggccatc
tcctggctggagaacaaccagctggccgacaaagacgagtatgagcaccagctgaaggac
ctggagaaggtgtgcaaccccatcatctccaaactgtaccaaggaggaatgcccggagga
atgccagcaggaggctgtggtgcccaggcacgcagcggcgcaggtgccagttcacagggg
cccaccattgaggaggtggactaa
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