Clupea harengus (Atlantic herring): 105905931 Help Entry 105905931         CDS       T09045                                  Symbol atg4da Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism char  Clupea harengus (Atlantic herring) Pathway char04136   Autophagy - other char04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:char00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105905931 (atg4da)    04136 Autophagy - other     105905931 (atg4da)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:char01002]     105905931 (atg4da)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:char04131]     105905931 (atg4da)    03029 Mitochondrial biogenesis [BR:char03029]     105905931 (atg4da) Peptidases and inhibitors [BR:char01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    105905931 (atg4da) Membrane trafficking [BR:char04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     105905931 (atg4da) Mitochondrial biogenesis [BR:char03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     105905931 (atg4da) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  105905931 NCBI-ProteinID:  XP_031419575 Ensembl:  ENSCHAG00000000972 UniProt:  A0A6P8F606 LinkDB All DBs Position 26:2270687..2292808 Genome browser AA seq 465 aa AA seqDB search MNSVSPSSAQYVGGGESSEMKGGHFGHVTDGNRNEGEPDEVDRLKTKLMSAWNSVKYGWS VKSKTSFNRTSPLYLLGHSYLFNHEDEVERFSLAFVSRLWLTYRKDFAPLEGAGLTSDCG WGCMLRSGQMLLAQGLLTHLLPSDWQWPASPPLTDVDFELFRPRSPSKTLGGVSIPSLSS FPPQWSSSAPPAPPEHPPRPAGDPQSQALHRRLVAWFGDHPAAPFSLHQLVALGRSAGRR AGDWYGPSVVAHILRKAVSSTAEVQNLAVYVAQDCTVYKEDVVRVCEDAPSWKSVIILVP VRLGGETLNPTYIQCVKNILKLECCIGIIGGKPKHSLFFIGIQDEQLLYLDPHYCQPVVD VTQSNFSLESFHCTSPRKMSVSRMDPSCTIGFYARSKKDFESLCSAVEVALSSSKEKYPI FTFVDRGSQDFGLDDIHDVPPPHILPPNQMAGSKKRGSADEFVLL NT seq 1398 nt NT seq  +upstreamnt  +downstreamnt atgaactctgtgtcccccagctcggcccagtatgtcgggggaggcgagagctcggagatg aaggggggccactttgggcacgttaccgatggcaaccggaacgagggggaaccagacgag gtggaccgactgaagacaaaactgatgtcggcctggaacagcgtgaaatacggctggtca gtgaagtccaaaacctccttcaacaggacctctcccctatatctgctggggcattcctat ctgttcaaccatgaagatgaggtggagaggttttccctggcctttgtgtcccgcctctgg ttgacctacaggaaggactttgctcccctggagggggcggggctaacctctgactgtggg tggggctgtatgctgcgcagcggacagatgctcctcgcccagggactactgacacacctg ctgccatcagactggcagtggcctgcttctccgcccctgacagacgtggactttgagctc ttccggccgcgttccccctccaagaccctaggaggcgtcagcatcccctccctctcctcc ttccccccgcagtggagctccagcgccccccccgcgccccccgaacacccccccaggccg gcgggggacccccagagccaggccctgcaccggagactggtggcctggtttggggatcac ccggctgcaccgttcagcctccaccagctggtggcgctagggaggagtgccgggcggagg gcgggggattggtacggcccgtctgtggtggcacatatactcaggaaagctgtgtcgtct actgctgaggtgcagaatctggcagtgtatgtggctcaggactgcacagtgtataaagaa gatgtggtgcgtgtgtgtgaggacgccccaagctggaagtccgtcatcatcctggtcccg gtccgactgggtggagaaacactcaaccccacctacatccagtgtgtcaaaaacattctg aagttggaatgctgtatcggaatcatcggtggaaagccgaaacactccttgttcttcatt ggcatccaagatgagcagctgctgtacttggacccgcactactgtcagcccgtggtggac gtcacccagagcaacttctccctggagtcgttccactgtacctctcccaggaagatgagt gtgagtcgaatggaccccagctgcaccatcggcttctacgcccgcagcaagaaggacttc gagtcgctgtgctctgccgtggaagtggctctctcctcctctaaggagaagtaccccatc ttcaccttcgtggacagggggagtcaggactttggattggatgacattcacgatgttccg ccccctcacatcctgccacccaatcagatggccgggagtaaaaagcgtggtagcgctgac gaatttgtcctgctgtga

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