Clupea harengus (Atlantic herring): 105905946
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Entry
105905946 CDS
T09045
Symbol
ctdsp1
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X4
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105905946 (ctdsp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105905946 (ctdsp1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105905946 (ctdsp1)
Protein phosphatases and associated proteins [BR:
char01009
]
HAD phosphatases
Fcp/Scp phosphatases
105905946 (ctdsp1)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105905946 (ctdsp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
105905946
NCBI-ProteinID:
XP_012689483
UniProt:
A0A6P3W671
LinkDB
All DBs
Position
2:19307257..19327945
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AA seq
265 aa
AA seq
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MDHPSSSIITQVSRDEEASTPLREKGAQTHAASSSKKPRSRSIFHSLFCCLCHDEAEQLP
VNNNAPLLVEENGTVSKVPAKPLLPQIKSKDAGKICVVIDLDETLVHSSFKPVNNADFII
PVEIDGTVHQVYVLKRPHVDEFLKRMGELFECVLFTASLAKYADPVSDLLDKWGAFRSRL
FRESCVFHRGNYVKDLSRLGRDLNKVIIIDNSPASYIFHPDNAVPVASWFDDMSDTELLD
LLPFFERLSKVDDVYAVLKQHRTTS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaccacccgtcctcgtcaattatcacacaagtgagccgtgatgaagaggcgagtact
cctttacgagaaaaaggtgcccagacacatgctgcatcctcatcaaagaagccacgcagt
cgcagcattttccacagtctcttctgctgcctgtgtcacgatgaagctgagcagctccca
gtcaacaacaacgcaccgctgctggtcgaagaaaatggaactgtctctaaagtcccagcc
aaaccactgctccctcagattaaatcgaaagacgcggggaagatctgtgtagtcattgat
ctagatgaaacactagtccacagttcatttaagccggtgaacaacgctgattttatcatt
ccagttgagattgatgggactgttcaccaggtgtatgtgttgaagagaccccacgtggat
gagttccttaaacgcatgggtgaattgttcgagtgtgtccttttcaccgcaagcttagca
aagtatgcagatcctgtgtcagatctgctggacaaatggggcgcctttcgcagtcgtctc
tttcgagaatcctgcgtgttccaccgtggaaactatgtcaaggacctaagccgcctaggc
cgggacctgaacaaggtcatcattattgacaattcccctgcctcctacatcttccaccca
gataatgctgtgcctgtagcgtcctggttcgatgacatgtccgacacagagctgctcgat
ctcctcccgttcttcgagagactgagtaaagtggacgacgtgtatgctgtcctgaaacag
cacaggactacaagctag
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