Clupea harengus (Atlantic herring): 105905986
Help
Entry
105905986 CDS
T09045
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105905986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105905986
03012 Translation factors [BR:
char03012
]
105905986
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105905986
Translation factors [BR:
char03012
]
Eukaryotic type
Release factors
105905986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
105905986
NCBI-ProteinID:
XP_012689528
Ensembl:
ENSCHAG00000000871
UniProt:
A0A6P8FN48
LinkDB
All DBs
Position
8:11866625..11879088
Genome browser
AA seq
443 aa
AA seq
DB search
MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPHNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETACQLYVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAAEILVVYENLDTMRYVLRCHGAESTGTENDEKTLFLTPEQEKDK
SHFSDKETGQEHELIESMPLLEWFANNYKRFGATLEIVTDKSQEGSQFVKGFGGIGGLLR
YRVDFQGMDYTGADDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaccgcagcagacagaaacgtggagatctggaagattaagaagttg
atcaaaagtcttgaagctgccagagggaatggcacgagtatgatctctctcatcattcct
ccgaaggaccagatttctcgagtggccaagatgttggctgatgaatttggcacagcctcc
aatatcaaaagcagagtcaaccggctctctgtgctcggagccatcacgtctgtacaacag
agactcaagctctacaacaaagtgccacacaatggcttggtggtgtattgtggaaccatt
gtgacagaagagggcaaagagaaaaaagtcaacatcgactttgagcctttcaaaccaatc
aacacatccttgtatctgtgcgataacaaattccacactgaggctcttaccgccttgctg
tcagatgacagtaaatttggcttcattgtgattgatgggagtggtgcactctttgggact
ctccagggaaacactagagaagtgcttcacaagttcactgtggaccttcccaaaaagcat
ggtagaggaggtcagtctgccttgcgtttcgcccgtctgagaatggagaagaggcacaac
tacgtacgcaaagtagccgagactgcgtgtcagctctacgtttccaatgacaaggtcaac
gtcgccggcctggtgctcgccggatcggcggacttcaagacggaactaagccagtcggac
atgtttgatccgaggttacaagcaaaggtcctgaagctggtggacatctcgtacggagga
gagaacggtttcaaccaggccattgagctctctgccgaggtcttgtccaatgtcaagttc
atacaggagaagaaactgatcggaagatactttgatgagatcagtcaggacacggggaag
tactgctttggtgtggaggacaccctgaaggctttggaaatgggagccgcggagatcctc
gtagtctacgagaacctggacaccatgcgttacgttctgcgatgccatggtgccgaaagc
actggaacagagaatgatgagaagacattgtttttgaccccagagcaagagaaggacaaa
tctcacttctcagacaaagagacaggacaagagcacgagctgattgaaagcatgcctctg
ctggagtggtttgccaacaactacaagagatttggagccacactggagatagtcaccgac
aagagccaagaggggtcacagtttgttaaaggctttggggggatcggggggctattgcgt
taccgggtggatttccagggaatggattacacgggcgcagatgatgagttctttgatttg
gatgactactag
DBGET
integrated database retrieval system
