Clupea harengus (Atlantic herring): 105905987
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Entry
105905987 CDS
T09045
Name
(RefSeq) F-box and WD repeat domain-containing 11-B isoform X2
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04114
Oocyte meiosis
char04120
Ubiquitin mediated proteolysis
char04218
Cellular senescence
char04310
Wnt signaling pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105905987
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105905987
04340 Hedgehog signaling pathway
105905987
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
105905987
04218 Cellular senescence
105905987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105905987
03036 Chromosome and associated proteins [BR:
char03036
]
105905987
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105905987
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105905987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_VPS8
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
105905987
NCBI-ProteinID:
XP_012689530
Ensembl:
ENSCHAG00000001156
UniProt:
A0A6P3W4P7
LinkDB
All DBs
Position
8:11881052..11896629
Genome browser
AA seq
525 aa
AA seq
DB search
MEPEMEDKTVELMNTSVMESQTGDLSPKTTTVFKISNGPMTGSRKRPSEGNYQKEKDVCI
QLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITVLPAQGLDHIAENILS
FLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTT
EVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGL
RDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLI
HHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIV
SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR
VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR
LQFDEFQIISSSHDDTILIWDFLNVSTNGQNEGRSPSRTYTYISR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaaccgtggagcttatgaacacctccgtcatggagtca
cagacaggggatctctcccccaagacaaccacagtgttcaagatcagcaatggtcccatg
acgggctcgcggaaacggccatcggaaggcaactaccagaaggagaaggatgtatgcata
cagctgtttgaccagtggtctgaggccgaccaggtggagtttgtggagcacctgatctcg
cgcatgtgccattaccagcacggccacattaactcctacctcaagcccatgctccaaagg
gatttcatcacagtactgccagctcagggtctggaccacatagcggagaacatcctgtca
ttcctggacgcgcgctcgctgtgctcggccgaactggtgtgtaaggagtggcagcgggtc
atctccgaaggcatgctgtggaagaaactgatcgagcgcatggtccgcaccgaccccctc
tggaagggcttgtcggagaggcaccagtgggagaagtaccttttcaagaaccgaacaaca
gaagttccgccaaattcctactaccgctccctgtatcccaaaataatccaagacatcgag
actatcgaggccaactggaggtgtgggcggcacaacctgcagaggattcagtgtcgctcc
gagaacagcaaaggtgtttactgcctgcagtatgacgacgacaaaatcatcagcggcctc
cgcgacaactccatcaagatctgggataaacaaaccctggagtgtctgaagatcctgacg
ggccacaccggctctgtgctctgcctgcagtatgacgagcgggtcatcgtcacgggctcc
tcagattccaccgtcagggtgtgggacgtgaactcgggcgaggtgctgaacacgctcatc
catcacaacgaggcagtgctgcatctgcgcttctgcaacggcctgatggtgacgtgctcc
aaggaccgctccatcgccgtgtgggacatggcctcacccaccgacatcagcctgcgccgt
gtgctggtgggccaccgcgccgccgtcaacgtggttgacttcgacgacaagtacatcgtc
tccgcatcgggagaccgcactattaaggtgtggagcaccagtacgtgcgagtttgtgcgc
acgcttaacgggcacaagcggggcatcgcctgcctccagtaccgggacaggctggtggtc
agcggctcgtctgacaacactatcaggttgtgggatattgagtgtggtgcatgtttgcga
gttttggaaggtcacgaggagttggtccggtgcattcggttcgacaacaagcgtatcgtt
agtggagcgtatgacggtaaaatcaaagtttgggacctgcaagctgcactggatccacgg
gctcctgccagcacgctctgtctgcgtacattggtggagcactctggtcgagtcttcagg
cttcagtttgacgagttccagatcatcagcagttcccatgacgacactattctcatatgg
gacttcctcaatgtctcaaccaatggacaaaacgaagggcgatcgccctcccgcacgtat
acgtacatctctagatag
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