Clupea harengus (Atlantic herring): 105906006
Help
Entry
105906006 CDS
T09045
Name
(RefSeq) syntaxin-3 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105906006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105906006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105906006
Membrane trafficking [BR:
char04131
]
SNARE
Syntaxin (Qa)
Stx-PM
105906006
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
105906006
Exosomal proteins of other body fluids (saliva and urine)
105906006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Relaxase_C
DUF6442
DUF6584
Branch
FlaC_arch
DUF1687
ETRAMP
YtxH
FAM70
FUSC
ArAE_1_C
Motif
Other DBs
NCBI-GeneID:
105906006
NCBI-ProteinID:
XP_031442703
Ensembl:
ENSCHAG00000001373
UniProt:
A0A6P8GW04
LinkDB
All DBs
Position
20:complement(1549586..1566816)
Genome browser
AA seq
290 aa
AA seq
DB search
MKDRLEQLKATLDTDDADDVEIAVDNAAFMDDFFVQIEDIRSSIDKIDEHVVEVKKLYSV
ILSAPTSEQKTQDDLETITNDIKKMANNARNKLKTIERNLETEQEERVSADMRIRKSQHA
VLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDDELEEMLESGNAAVFTAGI
VDSSISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDTVDNIEVNVSRSVD
HIEVAKSETKKAIRYQSKARKKTVIIVCVVLVILAIIALIIGLSVGLRSA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgactggagcaactcaaagcgacgctagacactgacgatgctgacgatgtg
gagattgctgtggacaatgcagcatttatggacgatttctttgtccagattgaagacatc
aggagtagcatcgacaagattgatgaacatgttgttgaagtgaagaagctttactcggtt
atactctcggcacccacatcggagcagaaaacacaagatgaccttgagactatcactaac
gacattaaaaagatggctaataatgccagaaacaagctcaagaccattgagagaaatttg
gagacggagcaggaagaaagagtttctgctgacatgaggatacgcaagtcacagcatgct
gtgctttcacggaagtttgtggaagtgatgaccaagtacaacgaggctcaggtggatttc
agagagaggagtaaaggacgcatccagaggcagctagagattactggtaaagccaccact
gatgatgagttggaggagatgctggagagtggaaatgcagccgtcttcacagcggggatc
gtggactccagcatctctaagcaggctctgagtgagatcgaggcgcgacataaggacatc
gtacgcctggagagcagcattaaggagctgcacgacatgtttgtggacatcgccatgcta
gtagagagccagggagatactgtagacaatattgaggtgaatgtgtccagatcagtggat
cacatagaagtggcaaaatccgagaccaagaaggcaatcaggtatcaaagcaaagctagg
aagaaaactgtaattatagtgtgtgttgtgctggtgattctggccattattgcgctcata
attggcctgtctgtgggtctccggagcgcctaa
DBGET
integrated database retrieval system