Clupea harengus (Atlantic herring): 105906044
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Entry
105906044 CDS
T09045
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105906044 (slc27a4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
105906044 (slc27a4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105906044 (slc27a4)
Lipid biosynthesis proteins [BR:
char01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105906044 (slc27a4)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
105906044 (slc27a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105906044
NCBI-ProteinID:
XP_012689593
Ensembl:
ENSCHAG00000023124
UniProt:
A0A6P3W4B7
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All DBs
Position
12:17263091..17282365
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AA seq
643 aa
AA seq
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MIRLACCTALLFLFRLILGLPWYQVLPAVIIFYLGSGGYKFLHVFMKTIGRDLHAAGVLL
RVKLNVRRHLRQRNTIPKIFAEMVQRHGDKTALIFEGTGEAWSFRQLDAYSNRVANLLLL
RGYKEGDVVALFMENRSQYVGLWLGMAKIGVEAALINFNLRLEALVHCINISNAKAVVFG
SELTDALCEVHSSMGKTVGLLCSGDWDPKRVPEGTELLEPLLDAAPNHQPSPPDRGFTDR
LFYIYTSGTTGLPKAAIVVHSRYYRMAALVYYGFAMTPDDVMYDCLPLYHSAGNIVGVGQ
CLIHGMTVVIRRKFSASKFWDDCIKYKCTIVQYIGEICRYLLNQPLRETEQQHRVRMALG
NGLRQSIWEEFTGRFNIPQIAEFYGATECNCSLGNFDNKIGACGFNSRILPYVYPIRLVK
VDEETMELIRGPDGVCIPCQPGEPGQLVGRIIQNDPLRRFDGYVNQTATSKKIADSVFKK
GDSAYLSGDVLIMDKYGYMYFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGLEGKAGMAAIADPEQSTNLEKFVRDMDKALPAYARPVFLRFLPEVNKTGTFKFQKTD
MRREGFDPSMVSDRLYFLDSSRGGYTQLTDELHRSIVSGKQKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtctggcgtgttgcaccgctctcctcttcctgttccggctaatcttggggttg
ccatggtatcaggtgttgcccgccgtcatcatcttctacctgggttccgggggatacaag
ttcttacatgtcttcatgaagacgattgggagagacctccatgcggcgggcgtgctgctc
agggtaaagctgaacgtgaggcgacacctgcggcagcgaaacaccatccccaagatcttc
gccgagatggtgcagcggcacggcgacaagacggcgctgatcttcgagggcacgggcgag
gcctggagcttccgtcagctggacgcctactccaaccgcgtggccaacctgctgctgctg
cgtggctacaaggagggcgacgtggtggctctcttcatggagaaccgctcgcagtacgtg
ggcctgtggctgggcatggccaagatcggcgtggaggccgcactcatcaacttcaacctg
cgcctggaggccctggtgcactgcatcaacatctccaacgccaaggccgtggtgtttggc
agcgagctgaccgacgccctgtgtgaggtgcacagctctatggggaagacggtgggtctg
ctgtgctccggggactgggatcccaaacgggtccctgagggaaccgaactcctggaacct
ctgctggacgccgcccccaatcaccagccaagcccaccagatcgcggcttcacagatcga
cttttctacatctacacctctggaactactgggctacccaaagctgccatcgtagttcac
agcagatactaccgcatggctgcactggtgtactacgggttcgcgatgaccccagatgat
gtgatgtatgactgtctgcccctctatcactcagcaggcaacattgtcggagtgggccag
tgtctgatccatgggatgaccgttgtcatcaggaggaagttctcagcctccaagttttgg
gacgactgcatcaagtacaaatgcactattgttcagtacatcggtgagatttgccggtac
cttctcaaccagccactgcgcgagacggaacagcagcaccgcgtacgcatggcgttaggc
aacggcttgcggcagtctatctgggaggaattcaccggccgcttcaacattccgcaaatc
gcagagttctatggtgccaccgagtgcaactgcagccttgggaacttcgacaacaagata
ggtgcctgtggcttcaatagccggatcctaccctacgtctaccccatccgcttggtgaag
gtggatgaggagaccatggagctcatcagaggaccagatggagtgtgtatcccctgccag
cctggtgaacctggtcagttggtgggccggatcatccagaatgacccactgcgacgcttc
gatggctacgtgaaccagaccgccaccagtaagaaaattgccgacagcgtcttcaagaaa
ggagatagtgcctacctatcaggcgacgttctcatcatggataagtacggctacatgtac
ttcaaggaccggacaggagacacgttccgctggaagggggagaacgtgtccaccaccgag
gtggagggaaccctaagccgtctgctcgacatgaaggacgtggtggtgtacggcgtggaa
gtgccaggattggagggcaaagcaggcatggcagccatcgcagacccagaacagagcacc
aacctggagaagtttgtgcgggacatggacaaggccctgcccgcctacgcccgacccgtc
ttcctacgcttcctgccagaggtcaacaagacgggaacctttaagtttcagaagacggac
atgcgtcgcgagggcttcgaccccagcatggtgtctgacagactgtacttcctggactcc
agtagggggggctacacgcagctgaccgacgagctccaccgcagcatcgtctccgggaaa
cagaaactctaa
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