Clupea harengus (Atlantic herring): 105906143
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Entry
105906143 CDS
T09045
Symbol
yme1l1b
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1b isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105906143 (yme1l1b)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
105906143 (yme1l1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
TIP49
AAA_22
DUF815
PhoH
Mg_chelatase
AAA_33
IstB_IS21
AAA_17
Zeta_toxin
nSTAND3
AAA_14
AAA_7
AAA_28
AAA_18
AAA_25
FAD-SLDH
Motif
Other DBs
NCBI-GeneID:
105906143
NCBI-ProteinID:
XP_031415948
Ensembl:
ENSCHAG00000005394
UniProt:
A0A6P8EIV1
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All DBs
Position
22:complement(25201796..25211161)
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AA seq
722 aa
AA seq
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MFSLSSTLQPQVTVQLSHLINAFHSLKSSIGSTPGRVQQRDHASEQDVQITETIWSLREL
GLTDLGVGQLDELVKTLLPCIVQQGALSAPTPAKSLWRTSHSSTGSFFHNKHGFSGGRIC
GASSIFCRQSPSPLQTLNADMQFRPCKSLIIWQQSRSFKTLKSRTRRLQGFDRSVEPEGF
TPSFMKSFLTRDKGQEVETLDKLLKTRNIPTGQHDAFKTGFADGFIKAQALSQRTQEALR
RTRLILLVLLLVGLYGLSKTPFLSVRFRTTSGMDSAVDPVQVKNVTFEHVKGVEEAKNEL
QEVVEFLRNPQKFTVLGGKLPKGVLLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEM
FVGVGASRIRNLFREAKSNAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFK
PNEGVIIIGATNFPEALDSALIRPGRFDMQVNVPRPDVKGRTEILKWYLRKIKVDTAVEP
GVIARGTVGFTGAELENLVNQAALKAAVDGKDMVTMRELEFAKDKILMGPERKSAVIDEK
NKQITAYHESGHAIVAYYTKDAMPINKATIMPRGGTLGHVSMLPENDRWSETRSQLLAQM
DVSMGGRVAEELTFGAEFITTGASSDFEGATKIAKMMVTRFGMSEKLGVMTYADQTKQSP
ETQAAIEKEIRILLRDSYERAKALLKSHTKEHKNLAEALLRYETLDAKDIQMVLEGKTLE
TR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctgtcttctacattgcaaccacaggttacagtccaactgagccacctcatc
aatgcctttcattctctcaagagctcaattggtagcacacctggcagagttcagcagaga
gatcatgcctcagaacaagatgtacagatcacagagactatctggagcctgagggagctg
ggattgacagacctaggggtaggacaactggatgaactagtgaagacgttgttgccctgc
attgtccagcagggggcactctcagccccaaccccagcaaaaagcctatggagaacgtca
catagctcgacagggtcattcttccacaacaagcatggattttctggtgggcgtatttgt
ggggcttcatcaatcttctgtagacagagtccttctcctctacagactttaaatgcagat
atgcagtttcggccatgtaagtcactcatcatatggcagcagagtcgcagctttaagacc
ttgaagtctagaacgagacgactgcaaggttttgatcgctcagtggaacctgagggcttc
actccctctttcatgaagagttttcttacacgagacaagggacaagaggtggaaactctg
gacaagctgctcaaaacaagaaacattcccactggacagcatgatgctttcaagactggc
tttgctgatggtttcatcaaagcccaagcactttctcagcgcacacaagaggccttgagg
cgaacccgactgatcctgctagtgctgctgttggtgggcctctatggcctctctaagaca
ccctttctgtcagtgcgatttcgaaccacatcaggaatggactcggcggtggaccctgtt
caggtgaagaacgtgactttcgagcacgtcaaaggggtggaggaggccaagaatgagctg
caggaggtggtggagttcctgaggaacccgcagaagttcaccgtcctcgggggaaagctg
cccaaaggagtcttgctggttggacctccgggcacagggaaaactctgttggccagggct
gtggcaggagaggctgatgtacctttctactacgcctctggatccgagtttgatgagatg
tttgtgggtgtgggagccagccgcatcaggaacctgttccgggaagccaagagcaatgcc
ccatgtgtgatctttattgatgagctggacagcgtggggggcaagagaatcgagtcgccc
atgcatccttactccaggcagaccatcaatcagctcttagctgagatggacgggtttaaa
ccaaatgagggggtcatcatcattggtgcgaccaacttcccggaagctttagatagtgct
ctgataaggccaggccggtttgacatgcaggtcaacgtccccaggccagatgtgaaagga
cgcacagagatccttaagtggtacctcaggaagatcaaagtagacacagctgttgagcca
ggggtgattgccaggggaacggtggggttcactggggcagagctggagaacctggtgaac
caggcagccctgaaggcagctgtggatggcaaagacatggtcaccatgagggagctggag
tttgccaaggacaagattctcatgggcccagagaggaaaagcgcagtgattgatgaaaag
aacaaacagatcaccgcctaccacgagtctggacatgccatcgttgcatattacaccaaa
gacgccatgcccatcaataaggccaccatcatgccacgaggcggaaccctgggccatgtg
tccatgctgccagagaatgaccgatggagcgagacgcgatcccagctgctggcccagatg
gacgtcagtatgggggggcgcgtggccgaggagctcacctttggggcggagttcatcacc
acaggtgcatcgagtgactttgaaggtgcgactaagatagccaaaatgatggtgactcga
tttggaatgagtgaaaagctgggtgtcatgacctatgcagaccagacaaagcagagccca
gagacacaagcagccattgagaaggaaatccggatactcctgagggactcgtacgagcgg
gccaaggcactcctgaagagccacaccaaggagcacaagaacctggccgaggctctgctc
aggtacgagaccctcgatgccaaagacatccagatggtcctggaggggaagaccctggag
accagataa
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