Clupea harengus (Atlantic herring): 105906152
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Entry
105906152 CDS
T09045
Symbol
pde6a
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
KO
K08718
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha [EC:
3.1.4.35
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00230
Purine metabolism
char01100
Metabolic pathways
char04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
105906152 (pde6a)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
105906152 (pde6a)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
105906152 (pde6a)
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GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
Motif
Other DBs
NCBI-GeneID:
105906152
NCBI-ProteinID:
XP_012689717
Ensembl:
ENSCHAG00000014049
UniProt:
A0A6P3W4X3
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Position
6:9698281..9716575
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AA seq
856 aa
AA seq
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MTAVDKDVAEKFLDSNPAFAKEYYDANFRPKVISDLLGGKSAQVDFKAFHALSSVEESEI
VFDLIRDIQDDYKMESATFNVMRHMSFMLRADRMSLFMYRQRNGVAELATRLFNVHKDAK
LEECLVPPDSEIVYPLDMGIVGHVATTKKLVNIKDATQDEHYSDFVDLLQEYKTKNVLAT
PIMNGKDVVSVIMAINKLDGPHFTEEDEEVFNKYLNFANLILRVFHLSYLHDCETRRGQV
LLWSASKVFEEITDIERQFHKALYTVRAFLNCDRFSVGLLDMTKTKEFYDLWPVQMGEVP
PYDGPKTPDGREIIFYKVIDYILHGKEDIKVIPAPAMDHWVLSSGLPTYVAETGLICNIM
NAGQDDFFNFQKGPLDKSGWTIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDDMDEALM
ESLTQFLGWSVLNSDIYDKMSKLENRKDVFQDMVLYHIKCRKDEIQNVLNTRERYGKEPA
DCEEAELEAILKEVLPDSKKSEIFEFHFYDAHHTEMDLVKCGIQMYYELNVVDQYHIPRE
VLVRFMYSLSKGYRAITYHNWRHGFNVGQTMFTLLMTGQLKRYYTDLEAMAMVTAGFCHD
IDHRGTNNLYQLKSANPLAKLHGSSILERHHLETGKTLLRDENLNIYQNLSQEQHSFVIH
LMDIAIIATDLALYFKKRAMFQKIVDQSKTYTDVGEWNNYMTGQTTRKEIVMAMMMTACD
LSAIAKPWEVQSKVALAVAAEFWEQGDLERTVLEQTPIPMMDRTKSADLPKMQCGFIDFV
CAFVYKEFSRFHEEITPMCDRLLNNRKEWNGLKEIHEGKLAELEAEKKAKEDAVEAKKAV
TQAPPPDTASKTCCIS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgtggacaaggacgtggccgagaagttcctggacagcaacccggcctttgcc
aaggagtactacgacgccaatttccgtccaaaggtcatctcggacctgctgggtggtaag
agtgcacaggtggacttcaaagcgttccacgctctcagctcggtggaggagagtgagatc
gtgttcgacctgatccgcgacatccaagatgattacaagatggagagtgccaccttcaat
gtgatgcggcatatgagcttcatgctgcgtgccgaccgcatgagtctcttcatgtaccgg
cagcgcaacggtgtggccgagctggccacccgcctcttcaacgtgcacaaggacgccaag
ctcgaggagtgcctggtgccgcccgacagcgagatcgtctacccgctggacatgggtatc
gtgggtcacgtggcgaccaccaagaagttggtcaacataaaggatgccacacaggatgaa
cattacagtgacttcgtggacctcctgcaggagtacaagaccaagaacgtgctcgccaca
cccatcatgaacggcaaagacgtggtgtccgtcatcatggccatcaacaagctggacggg
cctcacttcactgaggaggatgaagaggtcttcaataagtatctcaactttgccaatctg
attctgcgagtctttcacctgagctatctgcatgactgcgagaccagaagaggacaggtg
ctgctgtggtcagccagcaaggtgtttgaggagattacggacatcgagaggcagttccac
aaagccctctacacagtcagggccttcctcaactgcgaccgcttctctgtgggactcttg
gacatgaccaaaacgaaggagttctatgacctctggcctgtgcagatgggagaggtgccc
ccttatgacgggcccaagaccccagacggcagagaaatcattttctacaaagtcattgat
tatattctacatggcaaagaggacatcaaagtcatcccggctcctgctatggaccactgg
gttctgtccagcggattgcccacctacgtggccgagaccggactgatctgcaatatcatg
aatgctggtcaggatgatttcttcaactttcaaaaagggcctctggacaagtctggctgg
accattaagaacgtcctctccctgcccatcgtcaacaagaaagaggagattgttggcgtg
gcaaccttctacaacaggaaggatggcaagccattcgacgacatggacgaggccctgatg
gagtctctcacccagttcctgggctggtcagtgctgaactcggacatatatgacaagatg
tccaagctggagaaccgcaaggacgtcttccaggacatggtcttgtatcacatcaagtgc
aggaaggacgagatccagaacgtcttgaacacgcgcgagaggtacggcaaagaacctgcc
gactgtgaggaggccgagctcgaggcaatcctgaaagaggtgcttcccgactcgaagaaa
tcagagattttcgagtttcacttctacgacgcccaccatacggagatggacctggtcaag
tgtggcattcaaatgtactacgagctgaacgtggtggaccagtaccacattcctcgagag
gtgctggtgaggttcatgtactctttgagtaaaggctaccgcgcgatcacctatcacaac
tggaggcacggcttcaacgtgggacagaccatgttcacactcctgatgacgggccagctg
aagcgctactacacagatctggaagctatggccatggtgacggctggcttctgccacgat
attgaccaccgcggcaccaacaacctctaccagctgaagtctgccaaccccctggcaaag
ctgcacgggtcgtccatcctggagaggcaccatctggagactggcaagaccctactgcga
gatgagaacctgaatatctaccagaacctcagccaggaacagcattcgttcgtcattcat
ctgatggacatcgccatcattgccacggaccttgccctctacttcaagaagagagccatg
ttccagaagattgtggatcagtccaaaacctacaccgatgtgggcgagtggaacaattac
atgacgggtcagacgacccgcaaggagatcgtcatggccatgatgatgacagcgtgtgac
ttgtctgccattgctaaaccttgggaggtgcagagcaaggtggcgctggctgtggcagca
gagttctgggagcagggagacctggagaggactgtgctggagcagacccccattcccatg
atggacaggaccaagtcagctgacttaccaaagatgcagtgcggtttcatcgatttcgtc
tgcgcttttgtctacaaggagttttcccgtttccatgaggagatcacacccatgtgtgac
cggctgctgaacaacaggaaggaatggaacggcttgaaggagatccacgagggcaaactg
gccgagctggaggccgagaagaaggccaaggaggacgcggttgaggccaagaaggctgtc
acccaggcccctccgccggacaccgccagcaagacctgctgcatcagctaa
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