Clupea harengus (Atlantic herring): 105906170
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Entry
105906170 CDS
T09045
Symbol
neil3
Name
(RefSeq) LOW QUALITY PROTEIN: endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105906170 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105906170 (neil3)
Enzymes [BR:
char01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105906170 (neil3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105906170 (neil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
105906170
NCBI-ProteinID:
XP_012689733
Ensembl:
ENSCHAG00000001381
UniProt:
A0A6P3W4X4
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All DBs
Position
6:8715313..8725327
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AA seq
570 aa
AA seq
DB search
MVEGPGVTLNGEKIRSKVQKGQKVKEIRGGATPSSIGTIRSSYQVFGGRSYTGVDTLGKE
LFLYFGERALRVHFGMNGSMRINPTERKDQKGSLPVLVVQLTNDSICFYDSTVEIRLTAD
SEQKVRAMESLDMCSPKYSAIRAEEAVRAEGRRMLCDVLLDQGVLPGVGNIIKNEALFDS
GLHPSVTVSQLSSEQVRHLVKMTRDFTQLFYKCRKSGSALYKHYKVYKRPQCGQCKGSIT
VCRLGDNGRMTYFCQHCQTADPIQVNISKLPTRNTLIGWAYQRGGTNDHVAKKEEEEWAC
NLCTLINRPISKSCEACLTPRPEIPPPDQQEPCDSSAFSTHLIKYPCNSFSKPAQELKLN
RRAAFGHTTLVLSDLSTPSSPAGRTATSPLTPNSRVTQSPLWSGSQGDGLKRAGSLSDVD
GSYTQPYKRSRTDSGSVAVSHIKPNRQHGSVGVAPDKRKQEGQPSSPRIPCCASHGRPSV
LRVVNKEGXNRGRQFYCCSLPRESKCNFFEWADLHFPTCNHGKRSLMRTVLKLGPNNGRN
FYTCPMNKGQQCDLFQWAENGPGISILPGC
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggtccgggagtcactttgaacggagaaaagattcgctcaaaggttcagaaa
ggacaaaaagtcaaagaaattcgtggaggagcaacaccatcgtcgataggaacgatcaga
agctcgtaccaagtctttggtggacgctcgtacactggggtggacaccctgggaaaagag
ttgttcctatacttcggagaaagggcgcttcgggttcactttggcatgaacggttccatg
cggataaacccgaccgagaggaaggaccagaagggttctcttccggttctggtggtccag
ctcaccaatgacagcatctgtttctatgactccacagtggaaatcaggcttacagctgac
tctgagcagaaagtgcgtgcaatggagagtctggacatgtgctcaccgaagtatagtgcg
atccgtgctgaggaggcagtgagggcagagggccgacgcatgctctgtgacgttctcctg
gaccagggggttctgcccggcgtggggaacatcatcaagaatgaagccctctttgacagc
ggcctccatccctctgtcacggtgtcccagctgtccagtgagcaagtacgccatctggtc
aaaatgactcgggacttcacacaactgttttataagtgtcggaagagcggctcggccctc
tacaaacattacaaggtctacaagcggcctcagtgcggccagtgcaagggcagcatcacc
gtctgtcgtctaggcgataacggcaggatgacttacttctgtcaacactgccagacagca
gacccaatccaggtgaacatcagcaaactcccaaccaggaacactctgattggctgggct
taccagagaggtgggaccaatgatcacgtggcaaagaaggaggaagaggagtgggcctgt
aacctgtgcacccttatcaaccgaccaatcagcaagtcctgtgaggcctgcctgacccca
cgacctgagattccacctccagaccagcaggagccgtgtgactcgtcagcattctccaca
cacctcattaagtacccctgcaactccttcagtaagcccgcccaggagctgaagctgaac
cgccgcgctgctttcggccacaccaccctggtcctgtctgacctcagcacaccgtcgtcc
cctgctggccgcactgccacatcgccgctcaccccaaacagcagggtgacgcagagtcct
ttgtggtcaggtagccagggtgacggtctcaagagggcggggtcgctaagcgatgtggac
gggtcatacacccagccgtataagaggtcgagaacagacagcgggtcagttgcggtcagt
cacataaaaccaaaccgccaacatggctccgtcggcgtcgctccagacaaacggaagcag
gaaggccaaccttcttctcccagaatcccttgctgtgcctctcacggtcgtcccagcgtg
ctgcgcgtggtgaataaagaggggnacaaccgaggcaggcagttctactgctgttctctg
ccccgcgagagcaagtgcaacttctttgagtgggcggacttgcacttccccacctgtaac
catgggaaacggagcctgatgaggacggttctaaagctgggtcccaacaacgggcggaac
ttctacacctgccccatgaacaagggccagcagtgtgacctcttccagtgggccgagaac
gggccaggcatcagcattctgcctggctgctag
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