Clupea harengus (Atlantic herring): 105906178
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Entry
105906178 CDS
T09045
Symbol
ppid
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase D
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04217
Necroptosis
char04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
105906178 (ppid)
04218 Cellular senescence
105906178 (ppid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105906178 (ppid)
Enzymes [BR:
char01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105906178 (ppid)
Chaperones and folding catalysts [BR:
char03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105906178 (ppid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_6
TPR_19
ANAPC3
TPR_8
TPR_12
TPR_14
TPR_9
Seryl_tRNA_N
TPR_16
DUF4824
Motif
Other DBs
NCBI-GeneID:
105906178
NCBI-ProteinID:
XP_012689741
Ensembl:
ENSCHAG00000013565
UniProt:
A0A6P3W4X8
LinkDB
All DBs
Position
6:complement(9413542..9422113)
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AA seq
367 aa
AA seq
DB search
MSNPAPDNRPSNPDNPRVFFDVDIGGERVGRIVFEVFADIVPKTAENFRALCTGEKGSGT
STGKPLHFKGCPFHRIIKKFMIQGGDFSNQDGTGGESIYGEKFEDENFHYQHDKPGLLSM
ANAGPNTNGSQFFVTTVATPHLDNKHVVFGQVLKGFGLVKMLELVDTVEDAPVKPCVIGD
CGEHKEGDGWGVAPNDGSGDAHPDFPEDSDVDFKDAEKVHAVAEDVKNIGNNFFKTQKWE
SAMKKYSKALRYLEVCEDTGPQKNLTATALSCMLNTAACQLKLEQWQDAIDNCNEALELD
ETNTKALFRRAQAWQSLKEFNNAMTDLKKAQEIAPNDKAISNEMQRIKQRVKDEKDKEKK
LFSKMFA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacccagcacccgataacaggccttcgaacccagacaaccctcgggttttcttt
gatgtagatatcggtggcgaacgagttggtcgaatcgttttcgaggtcttcgccgacatc
gttcctaagactgccgaaaacttccgcgctctgtgcactggtgagaaaggtagtggcaca
agcaccgggaagcctctgcatttcaaaggatgtccgtttcaccggatcatcaagaagttc
atgatccagggaggagacttctccaaccaggacggcactggcggagagagcatctatgga
gaaaagtttgaggatgaaaacttccactaccagcatgacaaacctgggcttcttagcatg
gccaacgctggccccaacaccaacggctcccagttcttcgtgacgacagtggccacaccg
cacctggacaacaagcacgtggtgtttggccaggtgctgaaggggtttggcttggtgaag
atgctggaattggtggacaccgtggaggacgctccggtcaagccgtgcgttattggtgat
tgtggggagcacaaggagggggacggctggggagtcgctccgaacgacggctctggagat
gcccacccagactttccggaagattctgatgtggactttaaagatgctgaaaaagtccat
gccgtagctgaagacgtgaagaacatcggaaacaacttcttcaaaacccagaagtgggag
tctgccatgaagaagtactccaaagcgctcaggtacctggaggtgtgtgaggacacgggc
ccccagaagaatctgacggccacggccctgagctgcatgctcaataccgcagcctgccag
ctcaagctggagcagtggcaggacgcaatagacaactgcaatgaggctctggagctggat
gagaccaacactaaagctctgttcaggagagcgcaagcctggcagagcctgaaggagttt
aacaacgccatgactgatttgaaaaaagcacaggaaattgctcccaatgacaaagccatc
tccaacgagatgcagcgcatcaagcagagagtaaaggatgagaaggacaaagagaagaag
ctgttctccaagatgttcgcttga
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