Clupea harengus (Atlantic herring): 105906218
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Entry
105906218 CDS
T09045
Name
(RefSeq) teneurin-1-like
KO
K24473
teneurin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105906218
Domain-containing proteins not elsewhere classified [BR:
char04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
105906218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
TTR_TEN1-4
FN-plug_TEN1-4
Ten_N
Tox-GHH
EGF_2
RHS_repeat
NHL
CarboxypepD_reg
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
105906218
NCBI-ProteinID:
XP_042558739
Ensembl:
ENSCHAG00000009693
UniProt:
A0A8M1K9T1
LinkDB
All DBs
Position
20:18033623..18169579
Genome browser
AA seq
2612 aa
AA seq
DB search
MPAQSHARDSQGTDTTGQNDSSQINRNNWVLNSNIPLETRHFLFKHGSGSSTLLSAANQN
YPLTSNTVYSPPPRPLPRSTFSRPMFTFNKPYKCCNWKCTALSATAITVTLALLLTYVIA
VHLFGLTWHLRPADPQLYENGVSKLNRPPDTSVTTLPPLEGLGPDKIPRVKGVNYLTRIC
VFVRVCIPPAEKFQRGRAIDRGEVDIGAQVTQVIPPSLFWRFHLTIHHPTYVKFNLSLSR
EALLGVYGRRNLPPTHTQFDFVKLLDGKHLLKVEPKGPEAPGSGPGSGPRNQQLSGLQET
GFIEYMDPGTWHLALYNDGKKIETVLVLSTPIDTMDGCSSSCNGNGECVAGHCHCFAGFL
GPNCEKDTCPVLCSGNGEYEKGRCACHAGWKGPECSIQEDQCVDPTCSNHGQCVQGICIC
VPTYKGNNCEEVDCLDPQCAAHGVCVRGDCLCSPGWGGLSCESPLPTCQEQCSGHGTYLP
DTGTCTCEPSWTGADCYIEVCPVECGSHGVCSEGQCQCEDGWEGLACAQRACHPRCEEHG
QCRDGKCECHAGWEGEHCTIAHDFDDVVKDGCPGLCNGHGRCTLEQSGWQCVCQAGWSGP
GCNIVTERECDDNLDNDGDGLLDCVDPDCCEALVCSVSPLCQGSPDPGALLQQGQTPPRP
SAPQTFFQRVRFLLGKTGTHTLHGDIPFDRSQVAVVRGQVVAVDGTPLVGVNVTFFQHPE
YGYTVSRQDGSFDLVTAGAISVTLVFQRPPFLTQRHTVWLPWNCFMVLDKVVMARMEVPL
PVCDITSFVSPYPVVLPSPLSRYTGECAARGPVVPEVQAVQEEILIPGSFVKLSYLSTRT
SGYQSLLRIILTHASVPAALSKVHVSAAIEGRLYQRWYPAAPSLVYVLAWNKTDIYGQEV
WGLTEAIVSVGYEYDSCPDFILWERRTALIQGFEMMGSNLGGWSLDKHHVLNLQSGILHK
GNGENLFISQQPPVIATVMGNGYYRTIPCMGCSGPALQSKLFAPVALACGSDTSIYVGDF
NFIRRILPSGHTYNILELKNRDTRHSTSPAHKYYLAMDPVHETLYLSDTSSRKVYRLKSL
TEPRDPVRNMEVVAGTGDQCLPFDQSHCGEGGKATTASLNNPRGIVVDRRGFVYFVDGTS
IKKINERGVLTTIIGSNGLMSAQPLSCDARMDIAQVRLEWPTDLAVNPMDNSLYILDNNI
VLQVSESLQVRIVAGRPIHCQVPGIDHYLVSKSAVHSTLEAAKAIAVSQYGVLYIAETDE
RKINRVQQVTTNGEISVIAGATTDCDCKIDPNCECFSGDGGYARDARLEAPSALAVSPNG
TLYIADLGNIRIRAVSLNRPRPGAAGLYEVPSLPDQELYVFSANGTHLHTRHLITGDFLY
NFTYDSAERQLSAVVAKNGQAVHVRREGGGGSGGSGGASGAPLWLAVPGGQVFWLSVSMA
GGRALKRVSAQGHDVAHLSYHGGTGLLATKSNENGWTTVYEYNSEGHVINVTFPTGEVTS
FHGSMEKSVRVEVDSSNSENFVTATNFSATDTIFTLRQDHAQNSYRVSADGSLHVTLASG
MEVSLSTEPHVAGGLVSPAFSRCNISLPSEHSPSLIEWRQRRDQARSNYSTYERRLRAHN
RNLLSVDFDPATRVGKIYDDHRKFTLRILYDSQGRPVLWSPSSKYNEVNATYSASGQVTH
IHRGNWSEKLEYDNGKLVSRTWVNGKIWTYSYVEKSVMLLLHSQRRYIFEYDQTDRLLSV
TMPSMVRHSLQSMLSVGYYRNIYSAPDSRGSVLQDYAQDGRLLQTLYLGTGRRTLYRYTK
QARLAEILYDTTLVTFTHNDSSGVVKTVHLTHEGFVCTIRYRQIGPLVGRQIFKFSEEGL
VNARFDYSYNNFRVTSMQATINETPLPIDLYRYVDVSGRVEQFGKFSVIHYDLNQVITTH
AMKHTKIFSAYGQVVEVQYEILKSIAYWMTMQYDAWGRVTTCDIRVGADGNITRRSYEYD
ADSQLQTVLVNERPQWRYSYDLNGNINLLSQGASARLTPIRYDLRDRITRLGEIQYRVDE
DGFLRARGNDVFNYNSNGLLTRVYNRVTERSAQYRYDGLSRRVASRSSDGQHLQFFYADL
ANPTRVTHMYNHTSAQITSLYYDLQGHIIAMEISSGEEYYVGCDNTGTPRAIFNSRGRVV
KEILYTPYGDIYQDSNPTFQLIIGFHGGLYDPQTKLVHFGRRDYDVVAGRWTIPNYDVWG
ELSRTPKPFNLYAFRNNCPVGSIEEVTQFTTDIGSWLQLFGFQLHNVVPGFPKPDVTGTE
QTYELMKMQTKTQDWDSSKVNTRESTQRMTQRMTQRKREKERGREKEGERQTERERERQI
TSKKETHKRMAEISVVLGIQCELQRQLRNFISLDRLPMTPPVGSLEQCPSAPSSDGPSGP
SFSALPSIFGKGVRFAILRGLVAAEIVGVASEDSRRVAAILNGAMYLAGLRFTVDGRDTH
HFLKPGAVEDDLATLGGLSSGRVLENGVNVTVSQMTASVGGRSRRFADIQLRHGALCLSV
RYGATPDEARQQLLEAARERAVEEAWARERQLLLAGEEGSRAWSEAEKEQLRGTERVAGY
DGYFVLSVEQYLELADSANNIRFMRQSEVGRR
NT seq
7839 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccagagccatgccagggacagccagggcacagacaccacggggcagaacgac
agctctcaaatcaaccgcaacaactgggtgctcaacagcaacattcctctggagacaagg
cacttcctgttcaagcatggctctggctcctcgaccctgctaagtgcagccaatcagaac
tacccgctgacctccaacacggtgtactccccgcccccgcggcccttacccagaagcacc
ttctccaggcccatgttcacgttcaacaagccctacaagtgctgcaactggaagtgtacg
gccctcagcgccacagcaatcaccgtcaccctcgccctgctccttacttacgtcattgcg
gtgcatttgttcggcctgacctggcacctgcggcccgctgacccgcagctgtatgagaac
ggggtgagcaaactgaaccggcccccagacaccagcgtcaccaccctgccccctctggag
ggcctcggcccggacaagatcccccgcgtgaaaggagtaaattatttgacacgtatatgt
gtgtttgtgcgtgtgtgtatcccccctgcagagaagtttcagcgtggccgagccatagac
cggggtgaggtggacatcggcgctcaggtgactcaggtgatcccgcccagcctcttctgg
aggttccacctgaccatccaccaccccacctacgtcaagttcaacctctccctgtcacga
gaagccctcctgggggtgtatggcagaaggaacctcccgcccacacacacccagtttgac
tttgtgaagctgcttgacgggaagcacctcctgaaggtggagccaaagggcccggaggcc
ccgggatctggaccgggctcaggcccccggaaccagcagctgagcggactacaggagacg
ggcttcatcgagtacatggaccccggcacctggcacctggccctctacaacgacggcaag
aaaattgagaccgtcctcgtcctcagcacgcccatcgacactatggatggctgctccagc
agctgtaatggtaatggagagtgtgtggccggccactgccactgcttcgccggtttcctg
ggacctaactgtgagaaagacacgtgcccggtactgtgcagcggtaacggcgagtatgag
aaaggtcgctgtgcgtgccacgccggctggaagggccctgagtgcagcatccaggaggac
cagtgtgtggaccccacctgctccaaccacggccagtgcgtacagggcatctgcatctgc
gtgcccacctacaagggcaacaactgcgaagaggtggactgtctggacccccagtgtgct
gcccacggcgtgtgtgtgcggggcgactgcctgtgctccccgggctggggcggcctcagc
tgtgagagccctctgcccacatgccaggagcagtgctcgggccacggaacctacctgccc
gacaccggaacctgcacctgcgaacccagctggaccggcgctgactgttacatcgaggtg
tgccctgtagagtgtggcagccacggcgtgtgttcggagggtcagtgccagtgtgaggat
ggctgggaggggctggcgtgtgcccagagggcgtgccacccgcgctgcgaggagcacggc
caatgcagggatggcaagtgcgagtgccacgcgggctgggagggggagcactgcaccata
gcccacgactttgatgatgtggtgaaagacgggtgcccggggctgtgtaatgggcatggg
cgctgcaccctggagcagagcgggtggcagtgcgtgtgccaggccggctggagtggcccc
ggatgcaacatcgtcacggagagggagtgcgacgacaacctggataacgatggagacggg
ctgctggactgtgtggacccagactgctgtgaggctctggtgtgcagtgtgagccctctg
tgccagggctcccccgatcccggagctcttcttcagcagggccaaaccccccctcggccc
tcggccccccagaccttcttccagcgggtccgcttcctcctgggcaagaccggcacacac
actctacacggtgacatcccattcgacaggagtcaagtggctgtggttcggggacaggtg
gtggcagtggatggcacacctctggtcggagtgaatgtgactttcttccagcaccctgaa
tacggctacaccgtcagcagacaggatggcagttttgaccttgtcactgccggagctata
tccgtgaccctggtgttccagaggccgccgttcctcacgcagcgacacaccgtctggttg
ccatggaactgcttcatggtgctggacaaggttgtcatggcgagaatggaggtccctctc
cctgtctgtgacatcactagctttgtaagtccgtaccctgtggtcctgccgtcacccctc
tccaggtacacaggcgagtgtgccgcccggggcccagtcgtccctgaagtacaggccgta
caggaggagatcctgatcccgggcagcttcgtcaagctcagctatctcagcacccgcacg
tcgggctaccagtcgctgctgcggatcatcctcacgcacgcctccgtgcccgcggccctc
agcaaggtgcacgtgtccgccgccatcgagggccgcctctaccagaggtggtacccggcg
gcgcccagcctggtctacgtgctcgcctggaacaagaccgacatctacggccaggaggtg
tggggactaacagaagctattgtgtctgtgggctatgagtatgactcatgtccagacttt
attctgtgggagcggaggacggctctaatccagggatttgagatgatgggctccaatcta
ggcggctggtccctggacaaacaccacgtcctcaacctccagagtggaatcctccacaaa
ggcaacggcgagaacctcttcatctcccagcagcccccggtcatcgccacggtgatgggc
aacggctactaccgcaccatcccttgcatgggctgcagtgggcctgcgctccagagcaag
ctgttcgcccccgtggcgttggcgtgcggctccgacaccagcatctacgtgggcgacttc
aacttcatacgccgcatcctccccagcggccacacctacaacatcctggagctcaagaat
cgggacacaaggcacagcaccagtccggcacacaagtactacctggccatggaccctgtg
cacgagacgctctacctgtccgacaccagcagcaggaaggtgtaccggctgaagagcctg
actgagccacgcgacccggtccgcaacatggaggtggtggcgggcacgggcgaccagtgt
ctccccttcgaccagagccactgcggggaagggggcaaagccaccaccgcctccctcaac
aaccccagaggcattgtggtggacaggaggggctttgtgtactttgtggacgggaccagc
attaagaagatcaatgagcggggcgtgctgaccaccatcatcggctccaacggcctcatg
tccgctcagccactcagctgcgacgcacgcatggatattgcacaggtgcgactggagtgg
cccaccgacctggctgtcaaccccatggataactccctctacatcctggacaacaacatt
gttctgcaggtctccgagagcctacaggtgcgaattgtggcggggcggcccatccactgc
caggtgccaggcatagaccactacctggtcagcaagtcggccgtccactcgacgctggag
gcggctaaggccatcgccgtgtcgcagtacggtgtgctctacatcgccgagacggacgag
cgcaagatcaaccgcgtccagcaggtcaccaccaacggagagatctccgtcatcgccgga
gcaaccacggattgcgactgcaagattgaccccaactgcgagtgcttttcaggagatgga
ggctacgcccgcgacgccaggctagaggctccgtctgcgctcgccgtctcacccaacggc
acgctctacatcgccgacctggggaacatccgcatccgcgcggtgagcctcaaccgcccg
cgacccggcgccgccggcctctacgaggtgccctcgttgcccgaccaggagctgtatgtg
ttcagcgccaacggcacacacctgcacacgcgccacctcatcaccggcgacttcctctac
aacttcacctacgactcggccgagaggcagctcagcgccgtggtggccaagaacgggcag
gcggtgcacgtgcggcgggagggcggtggcggaagcggtggcagtgggggtgccagtggc
gcccccttgtggctggcagtgccaggcgggcaggtgttctggttgagcgtgagcatggcg
ggcggccgggcgctcaagcgggtgtcggcgcagggccacgatgtggcgcacctctcctac
catggtggcacgggtctcctagcaaccaagagcaacgagaacggctggaccacagtctat
gagtacaacagcgaggggcacgtcatcaacgtcaccttccccaccggtgaggtcaccagt
ttccacggcagcatggagaagtctgtgagggtggaggtggacagttccaactcggagaac
ttcgtaaccgccaccaacttctcggccaccgacaccatcttcacattacgccaagaccac
gctcagaatagctaccgcgtgagcgcggacggctcgctgcacgtgacgctggccagtggc
atggaggtgtctctgagcacggagccgcacgtggccgggggcctggtgagcccggcgttc
agccgctgcaacatctccctgcccagcgagcacagccccagcctcatcgagtggaggcag
cggcgcgaccaggcccgctccaactactccacctacgagagacggctcagggcccacaac
agaaacctcctctccgtcgactttgacccggccacacgggtgggcaagatctacgacgac
caccgcaagttcaccctgcggatcctgtacgactctcaggggaggcccgtcctgtggtcg
ccgagcagcaagtacaacgaggtcaacgccacatactccgcctcgggccaggtcacccac
atccaccgcggcaactggtccgagaagctggagtatgacaacggcaagctggtgtcccgc
acgtgggtcaacggcaaaatctggacgtactcatatgtggagaagtccgtcatgctcctg
ctacacagccagcggcgctacatcttcgagtacgaccagacggaccggctgctctcggtc
accatgcccagcatggtgcgccacagcctgcagtccatgctgtcggtgggctactaccgc
aacatctacagcgccccggacagccgcggctccgtgctgcaggactacgcccaggacgga
cgcctgctgcagacgctctacctgggcacgggccgccgcacgctctaccgctacaccaag
caggcgcgcctcgccgagatcctctacgacaccacgctcgtcaccttcacccacaacgac
tcgtccggcgtggtcaagaccgtccacctcacgcacgagggattcgtctgcaccatccgt
tacagacagatagggccactcgtgggacggcagatcttcaagttcagcgaggagggcctg
gtgaacgctcgcttcgactacagctacaacaacttccgcgtgaccagcatgcaagccacc
atcaacgagacgccgctgcccatcgacctctaccgctacgtggacgtgtcgggccgggtg
gagcagttcggcaaattcagcgtcatccactacgacctcaaccaggtgatcaccacccac
gccatgaagcacaccaagatcttcagcgcctatggccaggtggtggaggtgcagtatgag
attctcaagtccatcgcctactggatgacgatgcagtacgacgcgtggggccgcgtcacc
acctgcgacatccgcgtaggcgccgacggcaacatcacgcggcgttcttacgagtacgac
gccgacagccagctgcagacggtgctggtgaacgagcggccgcagtggcgctacagctac
gacctgaacggcaacatcaacctgctgagccagggcgccagcgcgcgcctcacgcctatc
cgctacgaccttcgcgaccgcatcacgcgcctgggcgagatccagtaccgcgtggacgaa
gatggcttcctgcgcgcgcgcggcaacgacgtcttcaactacaactccaacggcctgctg
acgcgcgtctacaaccgcgtgaccgagcgcagcgcacaataccgctacgacgggctgagc
cgccgcgtggccagccgctccagtgacgggcagcacctgcagttcttctacgccgacctg
gccaatcccacgcgcgtcacgcacatgtacaaccacaccagtgcccagatcacctcgctc
tactacgacctgcagggccacatcatcgccatggagatcagcagcggcgaggagtactac
gtgggatgcgataacaccggcacgccccgagccatcttcaacagccgcgggagggttgtg
aaggagatcctctacaccccttacggggacatctaccaggactccaaccccaccttccag
ctcatcatcggctttcatgggggcctctacgacccgcagaccaagctggtgcactttggc
cggagggactacgacgtggtggccgggcgttggaccattcccaactacgacgtatggggc
gagctcagccgcacacccaagcccttcaacctctacgccttcaggaacaactgcccagtc
gggagcatcgaggaggtcacgcagttcaccacagatattggcagctggctgcagctcttt
gggttccagctccataacgtggtgcctggtttccccaagccagacgtgacgggcacggag
cagacatacgaactgatgaagatgcaaaccaaaacccaggactgggactccagcaaggtg
aacacaagagagagtacacagagaatgacacagagaatgacacagaggaagagagagaaa
gagagagggagagagaaagagggagagagacagacagagagagaaagagaaagacaaatt
accagtaaaaaggaaacccacaagagaatggcagaaatctctgtggtcctgggcattcag
tgtgagcttcagcggcagctgcgtaacttcatctccctggatcgcctccccatgacgccc
cctgtgggctcactggagcagtgtccctccgccccctcgtctgacggccccagcggcccg
agcttctccgccctgccctccatcttcggcaagggcgtccgcttcgccatcctacgtggc
ctggtggcggccgagattgtcggcgtggccagcgaggacagccggcgcgtggcggccatc
ctgaacggcgcaatgtacctggcgggcctgcgcttcaccgtggacggccgcgacacgcac
catttcctcaagcccggcgccgtggaggacgacctggccacgctgggcggcctgagcagt
ggccgcgtgctggagaacggcgtcaacgtcaccgtctcgcagatgaccgcctccgtgggc
ggccgcagccgccgcttcgccgacatccagctgcggcacggcgcgctgtgcctgagcgtg
cgctacggggccacgccggacgaggcgcggcagcagctcctggaggcggcgcgggagcgg
gccgtggaggaggcgtgggcacgcgagcggcagctgctcctggccggggaggagggcagc
cgggcctggagcgaggccgagaaggagcagctccgtggcaccgagagggtggccggatat
gacggctactttgtgctgtcggtggagcagtacctggagctggccgacagcgccaacaac
attcgcttcatgaggcagagcgaggtggggcgaaggtaa
DBGET
integrated database retrieval system