Clupea harengus (Atlantic herring): 105906221
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Entry
105906221 CDS
T09045
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
char04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105906221
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105906221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105906221
04090 CD molecules [BR:
char04090
]
105906221
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Tumor necrosis fators
105906221
CD molecules [BR:
char04090
]
Proteins
105906221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
105906221
NCBI-ProteinID:
XP_031443000
UniProt:
A0A6P8H6J5
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All DBs
Position
20:complement(17692313..17696073)
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AA seq
316 aa
AA seq
DB search
MCHNCLTVRYRGNMLSHQHRDRLTKEEVRGSLQEHKYRKSSSFFFFAIGRHSFISQETLP
GLMILSHLRTGERVRSAVFAEKRLGFAAGLGLLMSYCTLLVSVTVVTLCLSIVLIQEVRV
LKTDLNGIKRDLHSPLAHRSVKEFSYGLFMSSMWEHSFKRPRNKREQDVWTTQASFLQMT
AMANEKPIQRGNVTVIPWTVAIHQGSAVTASDNKIIVQQDSYFMVFGQVLYHNQGTIMGH
LIRQHPANASGTETGYRDLFRCLQEMPTENSANTCYTAGIVKLDRNDQLELVIPDRPHTQ
VAMDTESTFFGIIQLQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtgccataattgccttactgtgaggtatagaggaaacatgcttagccatcaacatagg
gatcgcttaaccaaagaggaagtaagaggcagcctacaagagcacaagtacagaaagagt
tcctctttttttttttttgcaataggccgacattcatttatctcacaggaaacgttgcct
gggcttatgattttgtcacatttacggacaggagagcgggttagatcggcagtttttgct
gagaaacgtctgggttttgccgcaggattaggcctacttatgagttattgcactcttctc
gtctcagtcacagtagtgactttgtgtctgagcatcgtcctcatccaggaggtcagggtt
ttaaaaacagatctcaacggaattaaaagagaccttcactcccccttggctcatcggtca
gtgaaagagttcagctatggactgtttatgtctagcatgtgggagcattcgtttaaaagg
cctcggaacaaacgagagcaagacgtctggaccactcaggcatcattcttgcagatgaca
gccatggcaaacgaaaagcccatacagagaggtaatgtgacggtaattccatggacggtt
gccatccaccaaggttcagctgtcactgcatcagacaacaaaatcatcgtccaacaagac
agttacttcatggtgtttggccaggttctgtatcacaaccaaggaaccattatgggccac
ctgatccgccagcacccagccaacgcgtctggaaccgagacagggtaccgagacctgttc
cgctgcctccaggagatgcctacggaaaacagcgcaaacacatgttacaccgcagggatc
gtgaagcttgatcgcaacgaccagctggagttggtcattcccgatcggcctcacacacaa
gtagccatggatacggaatcaaccttctttggaatcattcagctgcaataa
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