Clupea harengus (Atlantic herring): 105906254
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Entry
105906254 CDS
T09045
Symbol
flt4
Name
(RefSeq) vascular endothelial growth factor receptor 3 isoform X1
KO
K05097
FMS-like tyrosine kinase 4 [EC:
2.7.10.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04020
Calcium signaling pathway
char04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105906254 (flt4)
04020 Calcium signaling pathway
105906254 (flt4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105906254 (flt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105906254 (flt4)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
105906254 (flt4)
Protein kinases [BR:
char01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
105906254 (flt4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Pkinase
Ig_2
ig
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR-2_TMD
VEGFR-1-like_Ig-like
Ig_6
C2-set_2
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
105906254
NCBI-ProteinID:
XP_031442662
Ensembl:
ENSCHAG00000001387
UniProt:
A0A6P8H4N4
LinkDB
All DBs
Position
20:17495839..17546859
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AA seq
1378 aa
AA seq
DB search
MKRDFTIFCRIWIGIAYASGLVIGYSMTPPTLDNLKEDLVIQAGDTLTITCRGQRTLDWA
WPEDTLQKIQASDRHDQNQDTDQLRPTGGPGQRAVRVEECPGEAGKPYCKTLVLSNAQGN
DTGHYRCFYQDIRAVIDGTTAASIYVFVRDLQQPFVKSQVETILVTESSADVIVPCLVSI
PELNVSLYQIEQSPVLLEDGGIRWNNKRGWSVPRHIIDSIAYLFGFYCIAKVEGQEFQSS
YYIVHSTGSKVYDLKLFPEDPVELMVGEALVLNCTAMVEFNAGVDLQWQYPRQQVNQTVS
PQYSRNSLAQATEATSIFTIRDVNVRDTGTYTCTAQSMDDLVTRSTVVIVHEKPFISLDY
KHGPVVETTAGEKSFKLSVKVSAYPMPETQWFRNAKAISKRPEFKRMKVHHQVLEIRDVC
EQDAGNYTVVVRNTAAALEKRLSLTLIVNVPPQIHEKEVAAPTNPYPRGSRQILTCTAYA
VPPATITWHWRPWSPCGLNSTRRSLGRRGARDKIPNCQNWQRMESENSVNAIEMPKTWTE
LVDGKNKTVSSVVIQNANVSVMYQCSAENKAGTDERLIYFYVTTIPEGFGIELEPREEPL
EQELVRLKCSADNYTYEELRWYRLDPHVVTPELDCRSLHRYGVALGGDLFFEAATNNWVL
ELTMPSVQPSDRGNYVCEVRSRRTGEKHCDRKYVPVKALEAPHYRHNPTNQTVNASESLQ
MECDVEGTPAPQLSWFKNNQPLHHTSGILLQDSNRTLSIQRVREEDAGVYTCKACNQKGC
VHASATVTVIAPPREMVEVVILIGTGVIAIFFWALLILIFCNVKRVNPADIKTGYLSIIM
DPGEMPLEDQCEYLPYDSSQWEIGRDRLRLGKVLGHGAFGKVMEATISSNEKKGSLDTVA
VKMLKDGATASEHKALMSELKILIHIGNHLNVVNLLGACTKANGPLMVVVEYCKYGNLSN
FLRAKREFFLPYRDRSPKTQSQVRKMIAAGQAEQQQTGRRTPHYHQSGGKAGRKSPQESV
EKMDDLWKTPLTVEDLICYSFQVARGMEFLDSRKCIHRDLAARNILLSEENVVKICDFGL
ARDIYKDPDYVRKGNARLPLKWMAPESIFDKLYTTQSDVWSFGVLLWEIFSLGASPYPGV
QIDEDFCKRLKDGTRMRAPDNASPEIYGIMLACWQGEPRERPNFPALVEILGDLLQDNSL
PDGKDYIPLNVSQSSEDDGFSQASSRPPSEEELRLNMLPNRYYNCVPFGGCVLVGPSKIC
HSRVKTFEEVPIEMTSHKAHHDSSQTDSGMVLASEEFERIEHKYRGGISRNPLTGSSTER
LINASAQGGRPPFLSQLSGQTFYNNEYGQLSEEGIGLDFFSVPDDLVTEGSCPASSNL
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagactttacgattttctgtcggatttggattgggatcgcttatgcctcaggt
ctggtgattggttattctatgactccgcccactcttgacaacctcaaagaagatcttgtg
attcaagccggtgacactctaaccattacatgcaggggccagcgcacactggactgggcc
tggcctgaggacaccctccagaagatccaggccagcgatcggcacgaccagaaccaggat
acggaccagctgcggccgaccggcgggcccggtcagagggctgtgcgggttgaggagtgc
ccaggcgaggcggggaagccctactgcaagacgctggtgctcagcaatgcccagggcaat
gacacaggccactaccgctgcttctaccaggacatcagggccgtcatcgacggcaccacc
gccgccagcatttacgtgttcgtcagagatctccaacagccatttgtcaaaagtcaggtg
gagactatcctcgtcaccgaatcttctgctgatgtcatcgtaccctgtctggtatccatc
cctgagctcaacgtctctctgtaccaaatagagcaaagtccggttctcctggaggacggg
gggataagatggaacaacaaacgaggctggtcagtgcccagacacatcatagacagcatc
gcatatttattcggcttctactgcatcgccaaggtcgaaggtcaagaattccagtcctca
tactacattgtacactctacaggaagcaaggtttacgatctcaagctgtttcctgaggac
ccagtggagctgatggtgggggaggcgctggtcctcaactgcacagccatggtggagttc
aacgcaggcgtggacctccagtggcagtacccccggcaacaggtcaatcagacggtcagc
ccccagtacagccgcaactctctggcccaggccaccgaggccaccagtatcttcaccatc
cgggacgtcaacgtgagggacaccggcacctacacctgcacagcccagagcatggacgac
ctggtgacgaggtccacggtggtcatcgttcacgaaaaacccttcatcagcttggactat
aagcacgggccggtagtagaaacaacagctggcgagaaatccttcaagctgtccgtcaaa
gtatcagcgtaccccatgcccgagacccaatggtttagaaacgctaaagcgataagcaag
cggccagagtttaagcggatgaaggtgcatcaccaggtgctggagatcagggacgtgtgt
gagcaggatgcgggaaattacaccgtggtggtgaggaacacagcagccgccctggagaag
agactcagcctcacactcatcgtcaatgtgcctcctcagatccatgagaaggaggtagcg
gcgcccactaacccttacccccgcggcagccgccagatcctcacctgcaccgcgtacgcc
gttcccccggcaaccatcacctggcactggagaccctggagcccctgtggtctcaacagc
acccggcgcagtcttggtcgcaggggagccagggataaaatccccaattgccagaactgg
caaaggatggagtcagagaactcagtcaacgccattgaaatgccaaagacttggacagag
ctggtggacggcaaaaataagacagtcagctctgtggtcatccagaacgccaacgtgtcc
gtcatgtaccagtgctcagccgagaacaaggccggcacggacgagagactcatctacttc
tacgtgaccaccatccccgagggcttcgggatcgagctggagccccgtgaggagccgctt
gagcaggagctggtgcgcctcaagtgcagcgccgacaactacacctacgaggagctgcgg
tggtaccggctggacccgcacgtggtgacgcccgagctggactgccgcagcctccaccgc
tacggcgtggcgctgggcggggacctgttcttcgaggctgccaccaacaactgggtgctg
gagctgaccatgcccagcgtgcagcccagcgacaggggcaactacgtgtgcgaggtgcgc
agccgacgcacgggggagaagcactgcgaccgcaaatacgtgcccgtgaaagctctggag
gcccctcattacaggcacaatcccaccaatcagacggtgaacgccagcgagtccctgcag
atggagtgtgatgtggagggcaccccagccccccagctctcctggttcaagaacaaccag
ccgctccaccacacctcagggatcctgcttcaggactccaaccggactcttagcatccag
cgcgttcgggaggaggacgccggtgtgtacacatgcaaagcctgcaaccagaagggctgt
gtgcacgcctcggcaaccgtcaccgtcatcgcaccccctagggagatggtggaggtggtg
atcctgatcgggaccggggtcatcgccatcttcttctgggccctcctcatcctcatcttc
tgcaatgtcaagcgggttaatcctgccgatattaagacgggctacctgtcaatcatcatg
gaccctggagagatgcccctggaagaccagtgtgaatacctcccctacgattccagccaa
tgggagatcggacgagaccgcctacgcctcgggaaagtgctgggtcacggagcgttcggt
aaggtgatggaggcgaccatctccagtaatgagaagaagggcagcctggacaccgtggcg
gtgaagatgctgaaagatggagccactgcgagtgaacataaagcgcttatgtcagaactg
aagatcctcattcacatcgggaaccatctgaatgtagtaaacctcttaggagcctgcacc
aaagctaacgggcccctgatggttgtggtggagtactgtaaatatggaaacctctccaac
ttcctgcgggccaagagagaattcttcctcccatatcgggaccgctcgccaaaaacgcag
agtcaggtgcggaagatgatcgcggccggacaggcggagcaacagcagacaggccgtcgg
accccccactatcaccagtccggcgggaaggcgggccgcaaaagtccgcaggagtccgtg
gagaaaatggatgatctgtggaagacgccactgacagttgaggacctcatctgttacagt
ttccaagtggcacgagggatggagtttctggattctcggaagtgcatccacagggacttg
gctgcccggaatattctgctgtccgaggagaacgtggtgaagatttgcgacttcggcctg
gcacgagatatctacaaggacccagactacgttcgaaaaggcaacgccagactgcccctg
aagtggatggcccctgagagcatctttgacaagttgtacaccacccagagtgacgtctgg
tccttcggagttctgctctgggagatcttctctttaggtgcgtctccatatccaggtgtc
cagattgatgaagacttctgtaaacgcttgaaggacggtaccaggatgagagccccagac
aatgcctcccctgaaatatatgggataatgctggcctgctggcagggagagcccagagag
agaccgaacttcccagcactggtggagatactgggagaccttctgcaggacaacagcctt
cctgacgggaaggactacattcccctcaacgtgtcccagagctcggaggacgacggtttc
tcccaggcatcctccaggcctccgtcagaggaggagctgaggctgaacatgctccccaac
aggtattacaactgcgtcccgtttggcggctgcgtgctcgtgggaccgtctaagatctgc
cactctcgagtgaagaccttcgaggaggtgccgatagagatgacctcccacaaagcacat
catgacagcagccagacagacagtgggatggttctggcatcagaggagtttgagaggatc
gagcacaaatacagaggaggcatctcaaggaaccctctgactggcagtagtacggagcgt
ctgatcaatgcgtcagctcagggaggccggccgccgttcctctcacagctctcgggccag
acgttctacaacaatgagtacggacagctgtctgaagagggcattggcctcgacttcttc
tccgtccccgacgacctggtcaccgagggaagttgtcccgcctcctccaacctgtaa
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