KEGG   Clupea harengus (Atlantic herring): 105906307
Entry
105906307         CDS       T09045                                 
Name
(RefSeq) charged multivesicular body protein 1b-1
  KO
K12197  charged multivesicular body protein 1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03272  Virion - Hepatitis viruses
char04144  Endocytosis
char04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    105906307
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105906307
  09143 Cell growth and death
   04217 Necroptosis
    105906307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105906307
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105906307
Membrane trafficking [BR:char04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    105906307
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105906307
  Exosomal proteins of other body fluids (saliva and urine)
   105906307
  Exosomal proteins of colorectal cancer cells
   105906307
SSDB
Motif
Pfam: Snf7 Ist1 Inp1 DUF948 DMSP_lyase DUF6455 ATP-synt_DE
Other DBs
NCBI-GeneID: 105906307
NCBI-ProteinID: XP_012689883
Ensembl: ENSCHAG00000013094
UniProt: A0A6P3W4S7
LinkDB
Position
20:18556868..18565033
AA seq 200 aa
MSAMEKHLFNLKFAAKELQRSSKKCDKEEKTEKAKVKKAIAKGNMEVARIHAENAIRQKN
QSINFLRMSARVDAVSSRVQTAVTMNKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEH
QFETLDVQTAQMEDTMGNTTTLTTPQSEVDLLMHEMADEAGLDLNMELPQGQTGSVVGAS
VASTEQDELSQRLARLRDQV
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcggccatggaaaagcatctcttcaacctcaagtttgctgccaaagagctccagcgt
tcgtctaagaaatgtgacaaagaggagaaaacggagaaagccaaagtaaagaaggccatc
gcaaagggcaacatggaagtggctcggatccatgcagagaacgccattcggcagaagaac
cagtccatcaacttcctccgaatgagcgcacgagtggacgctgtatcatcccgcgtccag
acggccgtcactatgaacaaggtcaccaagtccatggccggcgtggtgaagtcgatggat
gccaccctgaagagcatgaacctggagaagatctctgcactgatggacaagtttgagcac
cagtttgagacgttggatgttcagacagcacagatggaggacactatgggcaacaccacc
acgctcacaacgcctcagagtgaagtagatcttctgatgcacgagatggcggatgaggct
gggttggacctgaacatggagcttcctcagggacagacaggatctgtggtcggtgccagt
gtggcctcaacagagcaggatgaactctcacagcggctggccaggctacgtgaccaggtg
tag

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