Clupea harengus (Atlantic herring): 105906311
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Entry
105906311 CDS
T09045
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
105906311 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105906311 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105906311 (g3bp1)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105906311 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
105906311 (g3bp1)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105906311 (g3bp1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105906311 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
105906311
NCBI-ProteinID:
XP_031443393
Ensembl:
ENSCHAG00000021109
UniProt:
A0A6P8GY39
LinkDB
All DBs
Position
20:17231846..17239211
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AA seq
476 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSFVHGGFDSNGKPAEAVYGQSE
IHKKVMALRFQDCHTKIRHVDAHATLTEGVVVQVMGELSNNMQPMRRFMQTFVLAPEGTV
ANKFYVHNDIFRYQDEIFGDSDSEPLDESEEEGEELEERTASPIITQEDSSAFYEQTSCV
EPEVPGQEEVDSPPEAAPVMEPEPPVVELKPELVAEPETPISEPTEKAPASPTPADPAPA
MPEENRPFSWASVTSKNLPPGGVVPASGVPPHVVKVQPTQPRVEVKPEAPATAQRPQRDQ
RPRDTRPGPGPPVTNRGPRTPVRDGEQGEVETRRTVRYPDSQQLFVGNVPHDVDKAELKE
FFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILNSRPIKFRGDVRLNVEEKKTRSA
REGERRDIRPRGPGGPRDKLGGPRGPMGRGGMTQKPSFGGGRGSGPNEGRFSAPRQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaaacccagtgcccagcttgtcgggcgagaatttgtccgacagtactac
acacttctcaaccaggcccccgattacctgcacagattttatggcaagaactcatctttt
gttcatggaggctttgacagcaatggcaaacccgcagaggcagtttatggtcaatcggaa
attcacaagaaagtcatggcactaagattccaagattgccacacgaagatccggcatgtg
gacgcacacgctacgctcaccgagggcgtggtggttcaagtgatgggagagctctccaac
aacatgcagcccatgaggagattcatgcagactttcgtcctcgcccctgagggcacagtt
gcaaacaagttctacgtccacaacgacatattccgctaccaggatgagatctttggtgac
tcagactcagagccccttgatgagtctgaagaggaaggagaggagcttgaggagaggaca
gcatcacccataattacgcaagaggattcttctgccttctacgaacagacatcatgtgtg
gagcctgaggtcccggggcaggaggaggttgactcgcccccagaggctgcgccagtgatg
gagcccgagccaccagtagtcgagctgaaaccagagctggttgccgaacccgagaccccc
atctcggagcccacagaaaaggcccctgcgtcccccacccccgcagatcccgccccggcc
atgccagaggagaaccggcctttctcctgggcttccgtcactagtaagaaccttcctcca
ggtggagtcgtcccagcctctggagttccccctcatgttgtcaaagtccagcccacacag
cccagggtggaggtcaaaccagaagccccagccacagcacagagaccccagagggaccag
agaccaagagatacccgacccggacccggacccccagtcaccaacagaggccccagaaca
ccagtgcgggacggcgagcagggcgaggtggagacgcggagaacagtccggtacccagac
agccagcagctcttcgtcgggaatgtaccccatgatgtggacaaggctgagctgaaggag
ttctttgagcagtatggcaccgtgctggagctgaggatcaacagtggaggaaagctgccc
aacttcggctttgtggtgtttgacgactcggagcctgtgcagaaaatcctgaacagccgg
cccattaagttccgaggtgacgtccgtctgaacgtggaggagaagaagactaggtccgca
cgcgaaggagagcgacgagacatccgcccgcgaggccctgggggaccccgagacaagctt
gggggcccccgagggccaatgggccgtggtggtatgacccagaagcctagcttcggtggg
ggacgaggaagtggacccaacgagggacgattctctgctccgcgtcagtga
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