Clupea harengus (Atlantic herring): 105906337
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Entry
105906337 CDS
T09045
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105906337 (igf2bp3)
03041 Spliceosome [BR:
char03041
]
105906337 (igf2bp3)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105906337 (igf2bp3)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105906337 (igf2bp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
RRM_1
KH_PNO1_2nd
KH_NusA_2nd
KH_NusA_1st
KH_Vigilin
HTHP
Motif
Other DBs
NCBI-GeneID:
105906337
NCBI-ProteinID:
XP_031442122
Ensembl:
ENSCHAG00000012923
UniProt:
A0A6P8H393
LinkDB
All DBs
Position
19:6942675..6965355
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AA seq
581 aa
AA seq
DB search
MNKLYIGNVSEEASAVDLESIFEQWKIPYSGPFLVKTGYAFVDCPDEKVAMKAIDTLSGK
VELHGKLLEVEHSVPKRQRSCKLQIRNIPPHMQWEVLDGLLAQYGTVESCEQVNTETETA
VVNVRYAAKDQARQALEKLNGFMMESYALKVSFIPDELATGPEGPGLGGRRGMGSRGTPR
SGSPSMGARPKMQSDVPLRMLVPTQFVGAIIGKEGSTIRNITKQTHSKIDIHRKENAGAA
EKPITVHSTPEGCSAACRSIMEIMQKEAMDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIETDTETKITISPLQDLTLYNPERTITVKGSIEACTQAEQEVMKKIREAYDNDIAAMNL
QSNLIPGLNLNALGLFPGGASGGLSPSMMSAPPAGPGHPSFGGPQETETVHLFIPALAVG
AIIGKQGQHIKQLSRFAGASIKIAPADGADAKQRMVIISGPPEAQFKAQGRIFGKLKEEN
FFGPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDEEDQVVVK
ITGHFYASQVAQRRIQEILSQVRRQQQPKPSPSGPSLARRK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctttatatcggcaacgtgagcgaagaggccagtgcggtcgacttggaaagt
atctttgagcagtggaagatcccttatagcggaccgtttctcgttaaaacagggtacgcg
tttgtagattgcccggatgaaaaggtagcaatgaaggccatcgacactctctcaggtaaa
gtagaacttcacggaaaactactagaagtggaacactctgtacccaaacgacaaaggagc
tgtaaactccagatcaggaacataccacctcacatgcagtgggaggttctggatgggttg
ttagcacagtacggcacagttgaaagctgtgaacaagtgaacacagagacggagacagct
gtagtaaatgtacgctatgcagccaaggaccaagccagacaggcactggagaagctgaac
ggcttcatgatggagagctatgcgctgaaggtctcgttcatccccgacgagctggccact
ggccccgaagggcccggcttggggggtcgccgagggatgggctcccgtggaacccctcgc
tccggctccccttccatgggcgcgcggcccaagatgcagtcggacgtgccgctgaggatg
ctggtgccaacgcagtttgtgggcgccatcatcggcaaggagggctccaccatccgcaac
atcaccaaacagacccactcaaagatcgacatccaccgtaaggagaatgcgggcgctgca
gagaagcccatcacggtgcactccacccccgagggctgcagcgccgcctgccgcagcatc
atggagatcatgcagaaggaagccatggacaccaagttcactgaggagatccctttgaag
atcctggctcataataattttgtgggccgtttgatcggcaaagaaggacgcaacctgaag
aaaatcgagacggacacagagaccaagatcaccatctctcctttgcaggatctgaccctg
tacaaccctgagaggaccatcactgtgaaaggatctatcgaggcctgtacccaggctgag
caggaagtgatgaagaagatccgagaggcctacgacaatgacatcgctgctatgaattta
cagtcaaacctgatccctggactgaacttgaatgcgctggggctgtttcctggcggggcg
tctgggggactgagcccctccatgatgtccgcgccccctgctgggcctggacacccctcc
tttggtggtccgcaggagacggagactgtgcacctgttcatccccgcactggcagtgggg
gccatcattggcaaacaggggcagcacatcaaacagctcagccgcttcgccggcgcgtca
atcaagattgccccagcggacggtgctgatgccaaacagagaatggtcatcatctctggc
cctccggaggcccagttcaaggctcagggccgtatctttggaaagctcaaggaggagaac
ttctttggaccgaaagaggaggtgaagctggaggcccacatcaaagtcccatcctctgct
gctggcagagtcattgggaaaggaggcaaaactgtgaacgagctgcagaacctgtccagt
gctgaggtggtggtgcccagggaccagacgccagatgaggaggaccaggtggtggtcaag
atcacaggccacttctacgccagtcaggtggcccagcgccgtatccaggagatcctctct
caggtgaggcggcagcagcagcctaagcccagcccctctggcccctcattggccaggagg
aaatga
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