Clupea harengus (Atlantic herring): 105906366
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Entry
105906366 CDS
T09045
Symbol
dnmt3ba
Name
(RefSeq) DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a
KO
K17399
DNA (cytosine-5)-methyltransferase 3B [EC:
2.1.1.37
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00270
Cysteine and methionine metabolism
char01100
Metabolic pathways
Module
char_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
105906366 (dnmt3ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105906366 (dnmt3ba)
03032 DNA replication proteins [BR:
char03032
]
105906366 (dnmt3ba)
03036 Chromosome and associated proteins [BR:
char03036
]
105906366 (dnmt3ba)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
105906366 (dnmt3ba)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105906366 (dnmt3ba)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
105906366 (dnmt3ba)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105906366 (dnmt3ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_DNMT3
DNMT3_ADD_GATA1-like
DNA_methylase
CH
PWWP
CAMSAP_CH
DNM3A_N
Motif
Other DBs
NCBI-GeneID:
105906366
NCBI-ProteinID:
XP_031422303
Ensembl:
ENSCHAG00000018301
UniProt:
A0A6P8F1A5
LinkDB
All DBs
Position
4:complement(16983948..17005952)
Genome browser
AA seq
1539 aa
AA seq
DB search
MATNVSLDGSLTENKSSRFDLLKWLNKSLQTEFNQVEQTCSGACYCQMMHWLFPESIDLE
KVKFQAKDKEEFVHNFGLLQDSFVKTGVNRSVPLEDLVKGSFKATFHFMKWFKRFFIANC
SGQTYNPVAARNGVEISLARPFLRFSQSNEPAETVEIESDTDEETRGKKGTDPSYKDKGI
SYRDEWNTTFSWIKPSDLGKAYAFCSVCNINLSIQHSGTYEIRRHQKSKAHDRNKRNVSD
GTITIEDTVSCSEALFQFIQTLGISEVSAENEKVSHPRTKLVLGPHYPEDIMSACRQNPY
CLYIYGQIAVADGQQALVVLVGFFDDKAAKHRIRFLDAFQTSGSDSEEAVVSFLTETFKK
FELPSQNLCAFYTAGVGEHSDKIASQLKQLSPNIVALGGLYSLPDAACHAGVMEHFHEVK
ELILKIHAHFATLSTSDENLKTLFTGLHELEQSMSPQSTPCQAFSTLVGRVVGMWQELIS
YFGTDACGEEKSKFEEICTQLKNPELRAKFIFLESVLKPLRSFQERLETLDGTIRADLMQ
ILREASGLLRVYASSFLRPQAVMRFLKERDADLLMNPKFYLPTPQQNLGGTAVEDFLSEH
EADMADSVQVFLEKCVSFYATLTANLVEGLPLSDGVLRSMSQLLSPEGRLKVTGKAVVDL
AMQLGLTSTPEESSKLTDDFLEYQLVDEQKGELNASSSVNGSEEGYLDSSSTLSLEEHWG
TYLRTTGATSIFRKLMLSLLALPCPPLEAEKVFAQAVASVDFAHLNDSKKIDPDVINVEL
TSDSCPSDGVSPKPSPSRSSRSNRKKKAPSSKVLNDLACSLRPCAVRLQRMTKVNVVEDD
TVAMEDDVTWTSTEGGGVRGMYGWDSSLRQRPPVRTVFQAGAGTWCKPKSPEKEDEGPRK
VAQSTPAPVKNTPRASVASTPSSASPRYGKKGQMYQDGHSFIVGELAWGKVKDFSWWPGL
VVPWQGRVAPVGMRRVEWFGDGMFSEIHVAGLLPLAAFAKCFCTNSYASLPLYKSAIHNV
LELAGDRCDKSFSSSSGDKADELKAMLEWAFGGFQPSGPDGFLPPSDGKTTPKDSDSSMS
DYQPPAKRKHVSKNKSFVEPKGRANILQDVSGKVKKIENFCISCGSTDTEVPHPLFEGSL
CEKCKKNFMETLYRYDEDGYQSYCTVCCHGHEVLLCSNASCCRCFCKDCLDFLVGPGTFE
RTKEVDPWSCYICLPPKKSGVLKLRANWSVRVQEFFANNSAFEFEPHRIYPSIPAHKRRP
IRVLSLFDGIATGYLVLKDLGLKIELYVAAEICSDSVAVGTVKHEGKVQYIRDVRSLTRK
HLAEWGPFDLLIGGSPCNDLSMVNPARKGLFEGTGRLFFEYYRMLTMMRPRDGDDRPFFW
LFENVVAMGANDKSDICRFLECNPIMIDAINVSPAHRARYFWGNLPGMNRPMTASQSDRV
NLQDCLEIGRTAQFTKVRTITTKSNSIKQGKMGPLPVTMNGKEDYLWCTEMERVFGFPKH
YTDVANMGRSQRQKLLGQSWSVPVIRHLFAPLKDYFECE
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgtaagcctggatggaagtctcacagaaaacaaatccagccgctttgac
ctcttaaaatggttgaataaaagcctacagactgaattcaaccaggtggagcagacatgt
tcaggtgcatgttattgccagatgatgcactggctgtttccagaatccatcgacttggaa
aaagttaaatttcaagcaaaagataaagaggagtttgtccataacttcggtctgctgcag
gatagctttgtgaagactggtgtcaacagatctgttcctctagaggatctcgtcaaagga
agtttcaaggccacctttcattttatgaaatggttcaagagattcttcattgccaactgt
tcggggcagacgtacaacccagtggcggcacgaaacggagtggaaataagtctcgcaagg
cctttccttcggttttcacaatccaacgagccagcagaaacagttgaaatagaatctgac
actgatgaggagactcgtggtaagaaggggactgatccttcctacaaagataaggggatt
tcctacagagatgagtggaacaccaccttcagttggattaaaccaagtgatttgggaaaa
gcttatgctttctgcagtgtctgcaacattaacctcagcatccagcattcaggcacgtat
gaaattaggcgacaccagaaatcgaaagcccacgatcgaaacaaaagaaatgtgtctgat
ggcaccatcaccattgaagacacagtctcctgtagtgaggctctttttcagttcatccag
actcttggtatttctgaggtctcagctgaaaatgaaaaggtgtctcaccccagaacaaag
cttgtcttgggaccacattatccagaagacatcatgtcagcctgcaggcaaaacccttac
tgtctatatatttatgggcagatagctgtggctgatggacaacaggccctagtggtgctt
gtgggattttttgatgacaaggcagcgaagcaccgtattcgtttcttggatgctttccag
acctcaggcagtgattcggaggaagcagtggtcagtttcttgacagagactttcaaaaag
tttgaacttcccagccaaaacctgtgtgctttttacacagctggagtaggagagcactct
gataagatagcctctcagctgaagcaactcagtccgaacatagtggccctcggtgggcta
tacagtctaccagatgctgcttgccatgcaggtgtgatggagcactttcatgaagtcaag
gaattgattctgaaaatccatgcccactttgccaccctctcgactagtgatgagaacctc
aaaacacttttcacaggtcttcatgaacttgaacagtctatgtctccccaaagcacaccc
tgccaggccttttctactttagttggaagggttgttggaatgtggcaggagctcatctca
tacttcggcacagatgcctgtggagaggagaagagtaagtttgaggagatttgcacgcaa
ctgaaaaaccctgaactcagggccaagttcatatttttggagagtgttttgaagcccttg
cgttcctttcaggaacgactagagacactggacggaaccattcgtgctgatcttatgcag
atcttgcgtgaagccagtgggctgttgcgtgtctatgcctctagctttctgagaccacag
gctgtgatgcgcttcctcaaggagcgagacgcagacctcctcatgaaccccaagttctac
ctccccacaccccagcagaatctaggtgggacagctgtcgaggacttcctgtcagaacac
gaagcagacatggcggattctgtgcaggtgttcctggaaaagtgtgtgtccttctatgct
accctcacagcaaacctggtggagggtcttcccctgagtgacggggtactgagaagcatg
tcccagctactgagcccagagggaaggttgaaggtcactgggaaggctgtggtggatctt
gccatgcagctcggtctcaccagcactccggaagaatcctcaaagcttacagatgatttt
cttgagtaccagcttgtggatgaacagaagggggagctgaatgcaagtagtagtgtgaat
ggctctgaggaaggatatttggattcctcatccacactgtccctggaggagcactggggc
acttacctgaggaccacaggggccacatccattttcaggaaactgatgctgagcctcctg
gctctcccctgcccacctttggaggctgagaaggtttttgcccaggctgtagcaagtgtg
gattttgcccatttaaatgacagtaaaaaaatcgaccctgatgtcatcaatgtggaactg
actagtgacagctgtccctcagacggtgttagtcctaaaccatctcccagcaggagtagc
aggagtaacaggaaaaagaaagctcccagcagcaaagtgctgaatgaccttgcatgctca
ttgaggccctgtgctgtgcgccttcagaggatgaccaaggtgaatgtggtagaggatgat
acagtggccatggaggatgatgtcacttggaccagtactgagggcggtggtgttaggggc
atgtacgggtgggacagcagcttgcgccaaagaccccctgtccgcaccgtctttcaagca
ggcgcagggacatggtgcaaaccaaaaagtccagagaaggaggatgagggccccagaaaa
gtggcgcagtccacaccagcgccggtaaagaatacgccacgcgcctctgtggcaagcacc
ccctcttctgcaagtcccagatatgggaagaaaggacagatgtaccaggatggccatagc
ttcatcgtgggagagctggcttgggggaaggtgaaggacttctcctggtggcccgggctg
gtggtgccctggcagggtagggtcgcccccgtgggcatgaggagagtggagtggttcgga
gatggcatgttctcagagatccatgtagcgggtctactgccgttggccgcctttgcaaag
tgtttctgcaccaactcctatgccagcttgccactgtataaaagtgccatccacaacgtt
ctggagctggctggtgatcgctgtgacaagtctttctcctcctcgtcgggggacaaagca
gacgagctgaaggccatgctggagtgggccttcggtggctttcagccctctggacccgac
gggttcctccctccctctgacggcaagacaactccaaaggattctgactcctccatgtct
gattaccagcccccagccaagaggaagcacgtctctaaaaacaaatcctttgtcgagcca
aagggacgagctaatatcctccaagacgtgtctggtaaagtgaaaaaaattgaaaatttc
tgtatatcatgtggatcgactgacactgaggttccgcaccccctgtttgaaggaagtctc
tgtgagaagtgcaagaagaacttcatggagaccttgtacagatacgatgaagatggctat
cagtcctactgcacggtgtgctgccatggtcacgaggtgctgctgtgtagcaatgccagc
tgctgcagatgtttctgtaaggactgcctggacttcctggtaggcccgggaacgtttgag
cggacgaaggaggtggacccgtggagctgctacatatgtctgcccccaaagaagtctggg
gtgctgaagctcagggccaactggagcgtacgagtccaggagttcttcgccaacaacagc
gcctttgaattcgagccacaccgaatctatccatccatccctgcccacaagcgccggccc
atcagagtcctgtctctctttgacggcattgccacaggctaccttgtgctgaaagacctc
ggcttaaagattgagctttacgtcgctgcggagatctgttctgactccgtcgctgtgggc
acagtgaaacacgagggaaaagtccagtacatcagggatgtgcgcagcctcacccgcaaa
catttggctgaatggggtccgtttgatcttctgattggtggaagcccatgtaatgatctg
tctatggtgaacccagctcgcaaaggactctttgagggcacaggtaggctgttctttgag
tattaccgtatgctgacaatgatgaggccgagggatggtgacgaccggccgttcttctgg
ctctttgagaacgtggtagccatgggtgcgaatgacaagagcgatatctgccgcttccta
gagtgtaaccccatcatgatagatgcaattaatgtaagccctgctcacagagctcgatac
ttctggggaaaccttccaggaatgaacaggcctatgactgcctctcagagtgaccgagtt
aatctgcaggactgtctggagattggacggacagcccagttcaccaaagtgagaaccatc
accaccaagtccaattccatcaaacaaggaaagatgggacctctgccagtcactatgaac
gggaaggaggactacctgtggtgcactgagatggagagggtgtttgggttcccaaaacat
tacacggacgtggccaacatgggccggagccagcggcagaagctcctgggtcagtcgtgg
agcgttccagtgatccgccatcttttcgctcccctcaaggactacttcgagtgcgagtag
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integrated database retrieval system
