Clupea harengus (Atlantic herring): 105906456
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Entry
105906456 CDS
T09045
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105906456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105906456
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
105906456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
nSTAND1
RsgA_GTPase
DEAD
Sigma54_activat
AAA_13
TraD_N
Motif
Other DBs
NCBI-GeneID:
105906456
NCBI-ProteinID:
XP_031425167
Ensembl:
ENSCHAG00000005413
UniProt:
A0A6P8FPV6
LinkDB
All DBs
Position
6:20397509..20423319
Genome browser
AA seq
1589 aa
AA seq
DB search
MYRYPPTRVCNTTLSFCGNDNNSAAYNVDRGVLNNGCFLDALGLVPHVFLFFSTFPILFI
GWGSQSSKVHIHHSTWLHFPGHNLRWLLTFMLLFVLVCEIAEGIVSDGFSQSRHLHLYMQ
PGLAFLAAITSIIYYHNIETSNFPKLLFALLIYWILAFVTKTIKFGKYDAHGIGLGQLRF
CLTGLLALIYGLLLAVEVNVVLGRRYMCFNQPPEVKPPDDLQDLGVRYLQPFVNLLSKGT
YWWMNKFITSAHKRPIDLKIIGKLPIAMRAITNYQRLRKAFDTQKKEGTTVPRGPRWIWR
AMQQAFGRSLLLSITFRFIADLLGFAGPLCISGIVHHISRENHTIQDPVKLLGVHFISSQ
AFLANAYVLAVLLFLALLLQRTFLQASYYVAIETGIKLRGAMQAKIYNKIMRLCTSNLSM
GDMTAGQITNLVAIDSNQLMWFFFLCPNLCAMPVQVVIGVFLLYYLLGVSALIGATVIML
LAPVQYLLATQLSRAQKSTFEHTSERLKRTNELLRGIKMLKLYAWEHIFRDSIEETRTKE
LTSLRAFAIHTSVSIFLNAAIPIVAVLTTFLVHVYISTNNELSPDVAFASLSLFHILVTP
LFLLSSVLRSTVKALVSVQKLSEFFCGEEIETEPEPKTPTPTTSSNPSNIKSVYLCQLQA
KNLLNRKHNAKKDHNNAPAKKSPEEEPPTVQEDNICIKIINGYFSWTQGTPTLSNIDIKV
PIGQLTMVVGQVGCGKSSLLLAALGEMQMISGSVTWNCQRKQEDGEESNENPTAGKPSRK
RGSVAYASQRPWLLNSTVEENVLFDTAPNQTRYRDVVDACSLQPDFDSLPQGDQTVIGEQ
GIILSGGQRQRISVARALYQQTGVVFLDDPFSSLDIHLSDHLMMQGILRMLKGEKRTVVL
VTHKLHYLPNADWIIAMKDGTVQTQGTLRDIQCSEPELYEQWRTLMYREEAGKKSTTEMR
KKSFRRNMYSRDIQTRDEEEDEESVTDEDSLAAELRRRETIPWRSFSTYLHSGGFLLLLL
FVLSQLAKHTLMVAIDYWLAHWTSSFIVVKLSIAEGNCTSEQACTFAHSYYLLVFCILCC
LCIVLCLVTSVAVEWTGLRVATELHGNLLKAIILAPMRLFETTPLGNILNRFSADTNTID
QHIPTTLECLSRSALLCVSAIGVIAYITPVLLIALVPLGIICYFIQKYFRVASRDLQQLE
ESTQIPLLSHFSETVEGLTTIRAFRYEQRFKKKLLEYADGNNIASLFLTAANRWLEVRME
YIGAFVVLIAAVASISQSLNSLLTAGQVGLALTYALMVSNYLNWMVRNLADMEVQLGCVK
RISSLLQIEPECNQGVMTPAQVPAKWPQYGEINIENLSVRYANGLKPVLKHVNAHIRPGQ
KVGICGRTGSGKSSFSLALFRMVDTFEGQIIVDGINIAKLPLQTLRSRFSIILQDPFMFS
GTIRFNLDPERRASDRTLWEALEIAQLMPVVKALPGGLDATVTEGGENFSQGQRQLFCLA
RAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVNTILSSDVVIVMK
RGVILEYDEPGVLLQETDSIFASFVRADK
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgatatccaccgactcgggtgtgcaacacgactttgtccttctgcggcaatgac
aacaactcagcagcctacaatgtggaccgcggggtgctgaacaatggatgcttcctggac
gccctcggactggtgccgcatgtcttcctgttcttcagcaccttccctatcctcttcatc
ggctggggcagtcagagctcaaaggtccatatccaccacagcacctggctgcactttccc
ggacacaacctgcgctggctgctcacattcatgctgctcttcgtgctggtgtgtgagatc
gcggagggcatcgtgtcagatgggttcagtcaatctcgtcacctgcatctgtacatgcag
ccaggcctggccttcctagcggcgatcacatcaatcatctactaccacaacattgaaact
tccaactttcccaaactactctttgccttgctcatctactggatcttagcttttgtcact
aaaaccatcaagttcggtaagtacgacgcgcatggcattggcctggggcagctgcgcttc
tgcctcactgggttgctggccctcatctacgggctgctgctggctgtggaggtcaatgtt
gtcctgggcaggcggtacatgtgtttcaaccagcccccagaggtaaagcccccagatgac
ctgcaggatctgggtgtgcgctacctgcagcccttcgtaaacctgctgtccaagggcacc
tactggtggatgaacaagttcatcacctctgcacacaaacggcccatcgacctaaagatc
atcggaaagcttcccatcgccatgcgtgctatcaccaattaccagcgactccgcaaggca
ttcgatactcaaaagaaagagggcactactgtcccccgtggcccccggtggatctggagg
gcaatgcagcaggcttttgggaggtccctgctcctgagcatcaccttccgcttcatagct
gacctgctgggcttcgccgggcctctgtgcatctctggcatcgtccaccacataagcagg
gagaatcacaccatccaggatcccgtcaaactgctgggggtccacttcatctcctcccag
gcgttcttggccaatgcgtacgtcttggctgtcctgctgtttctagccctgctactgcag
agaaccttcttacaggcatcctactatgtcgccatagaaacaggaattaaactcagaggg
gctatgcaggcaaaaatctacaacaagattatgcgtctctgcacgtctaacttgtccatg
ggagacatgacagcgggacagattactaacctggtcgccatagactccaaccagctgatg
tggttctttttcctctgccccaatctgtgcgccatgccagttcaagtggtcatcggcgta
ttcctcctctactacctcctgggggtcagtgcgctgataggagccacggtcatcatgctg
ctggcccctgtgcagtacctgctggccacccagctctcccgggcgcagaaaagcaccttt
gaacacaccagtgagcgactgaagaggaccaacgagctgctgcgaggaatcaaaatgctg
aagctgtatgcctgggagcacatcttcagggatagcatcgaggagacgcggacgaaggag
cttaccagcctcagagcctttgcgatccacacctcggtgtccattttcctgaatgcagcc
attccaattgttgcagttcttacaacatttttggtccacgtctacatttccaccaacaac
gagctgtcgcctgacgtggcgttcgcctccctgtccctcttccatatcctggtcacaccc
ctcttcctgctctccagtgtcctgcggtccacagtcaaagccctggtcagtgttcagaaa
ctcagtgaattcttctgcggtgaagagattgaaacagagccagagcccaagacccccact
ccaactacatccagtaacccaagcaacatcaagtcagtatacctgtgtcagctccaggcc
aaaaacctgttgaaccgcaagcacaatgcaaagaaagatcacaacaatgccccggccaag
aagagccctgaggaggagccacccactgtccaggaggacaacatctgtattaagattata
aatggttatttctcctggacacagggaacccctaccttgtctaacattgacatcaaggtt
cctattggtcagttgaccatggttgtggggcaggttggctgtgggaagtcctctctgctg
ctggcagctctgggagagatgcagatgatttcaggcagtgtcacctggaactgtcagcgc
aaacaggaggatggagaggagagcaatgaaaaccccacagcaggaaaaccatctaggaag
agaggctcagtggcctatgcttcccagaggccctggctgctcaacagcactgtggaggag
aatgttctttttgatacagcccctaaccagacaaggtatagagatgtagtggatgcgtgc
tctttgcagccagattttgattctctgccacaaggggaccaaacagtgattggagagcag
ggcatcattctctcaggtgggcagcgccagcgcatcagtgtggctcgagctctttaccag
cagaccggcgtggtgtttctggatgaccctttctcatccctggacatccacctgagtgac
cacctgatgatgcagggcatcctgaggatgttgaagggagagaagaggacagtggtgctg
gtcacccacaagctccattatctgcccaatgcagactggatcattgcaatgaaagatgga
acagtgcagacccaaggcaccctgagagatatccaatgctcagagcctgaactgtatgaa
cagtggagaactctcatgtacagagaggaggctgggaagaaaagtaccactgagatgagg
aagaaaagcttccggagaaacatgtactccagagacatacagaccagagacgaggaagag
gatgaagagtccgtgacggacgaggacagcctggcagcggagctgcgtcgccgggagacc
atcccgtggcgctccttcagcacgtacctgcactcgggcggcttcctgctgctgctgctc
ttcgtcctgtcgcagctcgccaagcacacgctcatggtggccatcgactactggctggcc
cactggacgtccagcttcattgtggtcaagctcagcatcgccgagggcaactgcacgtcc
gagcaggcatgcactttcgctcactcatactacctgctggtgttctgcatcctctgctgt
ctgtgtatagtcctatgtctggtcacctcagtggccgtcgagtggacagggctgcgcgtt
gccacggagctgcatggcaacctgcttaaagcaatcatactggccccaatgaggcttttt
gagacgactcctttgggtaacatattaaataggttctccgctgataccaacactattgac
cagcacatccccaccaccctggagtgtctgagccgctcggcgctgctgtgcgtgtccgct
atcggggtcatcgcctacatcacgccggtcctcctcatcgcgctcgtccccctgggcatc
atctgctacttcatacagaagtacttcagagtggcctccagggatcttcagcaactggag
gaaagcacccagattcctttgctgtctcacttctctgagactgtggagggactcaccact
atccgcgcattcaggtatgaacaaaggttcaagaagaaactactagaatatgcagatggg
aacaacattgcctccctcttcctgacagcagccaatcgttggctggaggttcgcatggag
tatattggggcttttgttgttctgatagctgcggtggcttccattagtcagtccctcaat
agccttctcactgcgggtcaggttgggttagccctgacatacgcacttatggtgtccaat
tacctcaactggatggtgcgtaacttggcagacatggaggtgcagctgggctgtgtgaag
aggatcagcagcctgttgcagatcgagcctgagtgcaaccagggagttatgacaccagca
caggtacctgctaagtggccacagtatggtgagataaacatcgagaacctgagtgtgcgc
tatgccaatggactaaagccagtcctgaagcatgtcaatgctcacatcagacctggtcaa
aaggttgggatatgtggcagaacaggaagtggaaagtcctctttctctctggctctgttc
cgaatggttgatacatttgaagggcaaattatcgtagatgggatcaacatagctaagctc
cctctccagaccctgagatcacgcttttcaatcattctgcaggatcctttcatgttcagt
ggaactattcggtttaatttagaccctgagcggagggcctcagacagaactctgtgggag
gctctggaaatcgcccagctcatgccagtggttaaggctctgcctggtgggcttgatgca
accgtaacagaaggaggagaaaacttcagtcagggtcagcgccagctgttctgtctcgca
cgagcatttgtgcgaaagagcagcatcttgatcatggatgaggccactgcttcaatagac
atggccacggaaagcattctgcagaaagtagtcatgacagccttcgcagataggactgtc
gtcaccatagcgcatcgcgtcaacaccatactgagttctgatgtggtaattgtgatgaag
cgcggagtcattttggaatacgatgagcctggtgttcttttgcaagagacagacagtata
tttgcatcttttgtgagggccgacaaataa
DBGET
integrated database retrieval system
