Clupea harengus (Atlantic herring): 105906458
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Entry
105906458 CDS
T09045
Symbol
ptprja
Name
(RefSeq) receptor-type tyrosine-protein phosphatase eta isoform X1
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105906458 (ptprja)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105906458 (ptprja)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
char04090
]
105906458 (ptprja)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105906458 (ptprja)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
105906458 (ptprja)
CD molecules [BR:
char04090
]
Proteins
105906458 (ptprja)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Interfer-bind
fn3_2
Fn3_Dep-1_2nd
Ig_ILCR1
FN3_Tor_3rd
Y_Y_Y
Tc-R-P
PTP-SAK
Fn3_Dep-1_4th
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DSPc
TM_ErbB1
zf-XS
GH3_M
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
105906458
NCBI-ProteinID:
XP_031425177
Ensembl:
ENSCHAG00000013402
UniProt:
A0A6P8FPW6
LinkDB
All DBs
Position
6:20541886..20564061
Genome browser
AA seq
1784 aa
AA seq
DB search
MRRLQLFACVFLKAVILLCATVKVSHTQECTYCNYKASITTTEITINAGDTTCYVHNTTF
NQTGTNIVVSGLTPGTTYSLTINCTNDCCANFTTQAVSPTVTHINTTTVNVTWAGYPVTN
TSVTTRPQVILDLTIVLVTSESVSLSWDKGEGKSPFFRVLWENKENGVNGSKSTSNTSAV
VAGLSSSTKYEFWVRSVAADNLTVGDASDPKPVTTNPGVPTNIEAIDQGNSSLNVSWSRP
EGSVTEYVVYLGGQNKSTTSPPVLFENLRPGTVYRCNVTSVLGSARTPSDTVELATEPNP
PEAVSIADRTNTSLSLTWNTPLLMSGVTPLSYNASYSSSSSQVVQVTEAGTSVTLSSLSS
GTEYSINVSTIGALGLRSSIVSLTEYTLPNSVGNLRCRSVSTSLLELEWDSPLGYQSYYS
YRVQTISPTQTDQNVPGNTANLTGLQPATAYNFSVTTTIPDLQGLPAYILCYTKPKSVDN
LVAQFVSTTQILLTWSHPDDKGIYTYEALLVHAQGQSKSTSDNSTTFENLEPGTDYTFSV
TTKAYGETSEPSVASSFTNVGKATGLTAIGTNSTMAVNWVKPSGNVKMYIITIKQKETLI
QNVSQKNNQEVVFENLRPGKNYTITVTTKSGPFQEVSDMVKNATYPNPPRELQVEQYTNS
SIRLKWERPLDMDVGEYSFTVSYENTQSLTKDDNITVNNLLSGTQYSFTVKTVGALGYES
TAVTTQQYTKPNSVSELTWLNISMETVTVEWTQSDAKEGYSYRVDVSYPNGTQIKQLNVS
DTSATVGGLQSGGRYNVTVTTQTAGGTHAPAKSITALTKPYPITGLVAITQNDSAVFLNW
TRPIDFPPEGSYYITTNCSKAQPNLTVEAEAIYITGLSPGISCFSTVYSQVNDIAGDAVS
ISYSTKPPKVSPEVTHVDTNGINVTWTPVKGVDKYIVSLATAGVTIRTVNISNNESTNQN
LSLAFSHLLPATIYTVTITTVSGSFSEPSDPVTKATYPTQPGEIRIIDKTTGSITLSWGS
APNMTNANFSYIVRYETGAHSNETMTTNTTRLLSGLNSGTSYNISVSTIGPMDLKSEPVY
LYYVTTKPESVTSLTVSTTSTNSITVQWTPPSDVKDGYKYRVSGTNGGATNTTQLNEYTF
SGLSAGTKYTFSVQTLTGDGTAGALVNTSDCTAASVVSKLDCYGPNRTDAMLSLTWANPP
GSNMGFEIELGNSKQFIHTCNPSCSFNFSGLDYNTLYTVAILTTGCGKNSSVKSISCKTG
ITVPPKTSTEGSVMATDIEFDKFTLQLNPSLFNDTHGPVVSYAILLTSDLGSLSGGPTQY
LTKTFSDWTAGQTDTYLAVGQEFPSTSRSSDTISVVIGDGSQWQGYVNGPLNAKGTYRYA
VVIFTQMKLDNGLISATDSYFSITEFHTTTVYLPENPAVIGGAIGGAVAAVVFLLIITMI
FVVGLRRKKNKEDTPGVPIHSIRNKVSEPIKVEDYEAHYRRQRADSFCGFAEEFEDLKPV
GIAQAKSSALAPENRAKNRYNNVLPYDNSRVKMSVHGSLFDDYINASNMPGYNSRKEFIA
AQGPLPGTVNDFWRMIWEKNVHTVVMLTRCNEQGRVKCEEYWPAESKHFSNITVTTTSEF
PLEDWTIRDFDVKNMKTAETRAVRHFHFTAWPDHGVPETTELLINFRHLVREHMDQYSRH
SPTMVHCSAGVGRTGTFIAIDRLIFQIERDGLVDIYGIIHDLRMHRTLMVQTEDQYVFLN
QCAIDIIRSRTGTNVDLIYQNTAALTIYENFEPMKKSKNGYHKA
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtttacaattattcgcctgtgtgttcttgaaggctgtgatcttactgtgtgcc
actgtaaaggtttcacatacacaagaatgcacgtattgtaactataaagcttccatcacc
actacggaaatcacaataaacgcaggagataccacatgctatgttcacaataccaccttc
aaccagacggggacaaatatagtcgtgagtggactgacgccaggaaccacatactcctta
actatcaactgcaccaatgactgctgcgccaacttcacaacacaagcggtcagtcctact
gtcacgcacatcaacacaacaaccgtgaatgtcacctgggcagggtatcctgttacaaat
acatcagtcaccacacgcccacaggtcatcctcgacttaacaatcgttttggtcacgtct
gaatccgtgtctcttagctgggacaaaggggagggcaaaagtcccttctttagagtgctt
tgggaaaataaagagaatggtgtgaacggaagcaaaagcaccagtaacacctctgccgtg
gtagcaggactgagctcaagcactaaatatgaattctgggtcagatcagttgcagctgat
aacctgactgttggtgacgcttcagaccccaagccagtgacaaccaacccaggagtgcct
acaaacatcgaggccatcgatcaggggaacagctctttgaacgtgtcctggagcaggccc
gagggcagtgtgacagagtatgtggtgtacctcggtgggcagaacaaaagcacaacgtcg
ccaccggtgctgtttgaaaatctcagacctggaacggtatacagatgcaatgtgacttca
gttcttggatcagcaaggaccccctcagacacagttgagttggctaccgagcccaaccca
ccagaagctgtcagcatcgctgacaggaccaacacttccttgtcactcacatggaacact
cctctcctgatgagtggagtcacaccactctcttacaatgcatcatactcttctagctca
tcgcaggtggtgcaggtcactgaagcgggcacctctgttacactgtccagtttatcctcg
gggacagagtacagcatcaacgtgtcgaccataggagctctaggcctgaggagcagcatt
gtctctctgactgaatacactttgcccaactctgtggggaaccttcgttgccgttctgtg
tccaccagtttgctggaactggaatgggacagtcctcttggctatcagagttactactca
tacagggtccaaacaatctctcccacgcagacggaccagaatgtgcctggaaacactgct
aacttgacaggccttcaacctgcaactgcatataacttcagtgtcacaaccactatacct
gatctccaagggctgcctgcatatattttgtgctatacaaaaccaaagagtgtagacaat
ctcgttgcacagtttgtcagcacaacccagattctcctcacgtggagtcacccagacgat
aaagggatttacacatatgaagcactgcttgtacatgcgcagggccagagcaaaagcacc
tctgacaacagcacaacctttgagaacctggaacctggcaccgattacacattcagtgtc
accaccaaagcctatggcgagacatctgagccctctgtagcctcctcattcacaaacgtt
gggaaagcaacaggcctgactgcgattggaaccaactcaaccatggcagtcaactgggtc
aaacccagtgggaatgtaaagatgtacataatcaccataaaacaaaaggaaactctgatc
caaaatgtgagccagaagaacaatcaggaggtggttttcgaaaacctgcggccgggcaaa
aactacacaatcaccgtgacaaccaaaagtggaccattccaggaggtgtcagatatggtc
aagaatgccacatatcccaaccctccgagggagctgcaagttgagcaatacaccaacagc
tccatacgtctgaagtgggagaggcctctagatatggatgtgggagagtacagctttact
gtgtcctatgaaaacactcaaagtctgactaaggatgacaatatcaccgtgaataacctg
ctctcaggcactcagtacagcttcacagtgaagactgtgggtgcacttggctatgagagc
acagcggtcacaacccagcagtacaccaaacccaactctgtgagtgagctgacctggctg
aacatcagtatggagactgtgacggtggagtggactcaaagtgacgctaaggaaggctac
tcttaccgggtggatgtttcttatcccaacgggacgcagattaagcagctcaacgtctct
gacaccagtgcaacagtagggggactgcagtctggagggaggtacaatgtcactgtcacc
actcaaactgcaggtggcactcacgctccagccaaatccatcaccgcgctcacaaaaccc
taccccatcactgggttagtagccatcacacaaaatgactctgctgtattcctgaactgg
accagacccatagacttccctccagaggggtcttactacataactaccaactgcagcaag
gcccagcctaacctgacagtggaggcagaagccatctacatcacagggctgagcccaggc
atctcctgcttctctactgtttatagccaggtcaatgacatcgctggagacgccgtcagc
atctcatacagcacaaagcctcctaaagtctctcctgaagtcacgcatgtcgacacaaat
ggcatcaatgtgacatggacccccgtgaagggtgttgacaagtacattgtctccttggcc
actgctggagtcaccattcggactgttaacattagcaacaatgagagcacaaatcaaaat
ttgtcacttgcgttttcacacctgctgcccgccaccatctatacggtcaccattacgaca
gtcagtggttccttcagtgagccgtcagatccagttaccaaagcaacctatcctacccag
cctggagaaataagaatcatagacaaaaccacaggctctatcacactgtcatggggaagt
gctccaaacatgaccaatgccaacttcagttacattgtcaggtatgaaactggagctcat
agcaatgaaaccatgaccacaaacaccacccggctcctgtccggcctgaattctggaact
tcctacaacatctctgtgtcaaccattggtccgatggacctcaagagtgaaccggtgtac
ctgtactatgtgacgacaaaacccgagagtgtaacatctctgaccgtgtccacaacatcc
acaaacagcatcacagttcagtggacccccccctctgacgtcaaggatggatataagtat
agggtcagtggcaccaatggaggagccactaacaccacccagctaaatgaatacactttc
agcggtttaagtgcaggaactaaatacacctttagcgttcagaccctcactggtgatggc
acagcaggagctctagtgaatacatctgactgcacagctgcatcggtggtgtctaagtta
gactgttatgggcccaaccggactgatgccatgctgagcctaacatgggctaaccctcct
ggctcaaatatggggtttgaaatcgagctgggaaactccaagcagttcattcacacatgt
aaccccagttgctcctttaacttctctggtctggactacaacaccctgtatactgttgcc
atcttgaccactggctgtggaaagaacagctctgttaaaagcatatcctgcaagactggc
attacagtccctcctaagaccagcactgaaggcagtgtgatggcgactgacatagagttc
gacaagttcactcttcagctgaaccccagcctcttcaacgacacccacggccctgtagtc
agttatgccatccttttgacctcagatcttgggtcattaagtggagggccaacccaatac
ctgaccaagaccttttcagactggacagcaggacagaccgacacatacctagctgttggt
caggaattcccgtctacaagtcgcagctcagatacgatctcagtggtgataggagatggg
tctcagtggcagggatatgtaaacgggccactcaatgcaaaggggacgtacagatatgcc
gttgtcatcttcacccagatgaaactagacaatggactaatttcagcaacagactcatac
ttttcaatcacagagtttcacacgacaacagtatatctacctgaaaatccagctgtcatt
ggtggagccataggaggtgctgttgcagcagtggtctttctcctcatcatcactatgatt
tttgttgtcggcttacggaggaagaaaaataaagaggacactccaggagtgcccatccac
tccataagaaacaaagtaagtgaacctataaaggtggaggattatgaagctcactacagg
aggcaaagagcagactccttctgtggcttcgcagaggaatttgaggacctgaagcctgtg
ggtattgctcaggcaaagagcagtgctttagcccctgaaaacagagcaaagaaccgctac
aacaatgtgctaccctatgataactcacgggtcaagatgtctgtccatggcagtttgttt
gatgattacatcaatgccagcaacatgcctggttataactcccgtaaggagtttatcgcg
gcccagggccccttgcctggtacagtgaatgatttctggaggatgatctgggagaagaac
gttcacacggtggtcatgctgaccagatgcaatgagcaaggacgggtgaaatgtgaggag
tactggccagctgagtctaaacatttcagcaatataactgtgaccacgacttctgaattt
cctctggaggactggaccattcgggactttgatgtcaaaaatatgaagacggcagagacg
cgtgccgtgcggcacttccacttcacagcctggccagaccacggcgtgccggagaccact
gaactgctcatcaacttcagacacctggtgcgggagcacatggaccagtactcccgccac
tcccccaccatggtgcactgcagtgctggtgtgggacgtactgggacattcattgccatc
gatcggctcatcttccagatagagcgagatgggctggttgatatctatggaatcatccat
gacctccgaatgcaccgaacgcttatggtacaaactgaggaccagtatgtgttcctgaat
cagtgtgccatagacattatcaggtcaaggacgggcaccaacgtggatttaatctatcag
aacaccgctgccctcactatttatgaaaactttgaacccatgaagaagtccaaaaatgga
taccacaaagcctag
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integrated database retrieval system
