Clupea harengus (Atlantic herring): 105906465
Help
Entry
105906465 CDS
T09045
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105906465 (lrrk1)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105906465 (lrrk1)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: TKL group
LRRK family
105906465 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
COR-B
Ank_2
Roc
COR-A
LRR_14
Ras
Ank_4
Arf
Ank_KRIT1
Beta-prop_LRRK2
Gtr1_RagA
AAA
Motif
Other DBs
NCBI-GeneID:
105906465
NCBI-ProteinID:
XP_012690072
Ensembl:
ENSCHAG00000020219
UniProt:
A0A6P8FH92
LinkDB
All DBs
Position
6:complement(20819511..20862293)
Genome browser
AA seq
2023 aa
AA seq
DB search
MMSYWSVGVSEDQGATSSMGEQDGAADMGAKQSVLGNFSLGQSPTLENIQAAYRDGESGR
AQDLIRISCKESGGLRPERQELLCVAAQYGDVESVRYLLREVRVPIPQETGEKNPAIQAA
HSGQHHVVRELLDSIPSHCLRRDLLNWMLATACQQGHLEVVKLLVLSYQADAEDCAIHNN
EFAVITGLPLYAAARAGKKEIATFLLENGAGFSSYTLMDHPDFSRELLRQRLLETTPGAE
TSGTTEEALSVQWSGLKLPWLELDWFMDVSSRITHLDLSRNSLSSLPSVVPWGLIELRSL
DLSCNQLKELPSTQSSQEIICTRLRHVSLSENELASLPPGLLHMCQLQRLSAAKNKLTSL
FEVPNGTNWIGLRKLQELDVSDNSLSSLPSPVLHCFKSLCSLNVSRNKLASFPDPWACPL
KCLRASCNQIESLPDLISIFWRTHLREVDFSDNALKELPSYIFELEAIVSLRLCGNQISS
LPAPNKWKCSQLRTLDLSRNQLGKSEESTKTRKLGFFTTWQRRDPDPVSPIQFPVILRDS
LEVLFLNDNQLDYVPPSVCSLKTLSELYLSNNTGIQELPAELGQLPNLWQLDIEDLNINN
VPPEVRKEGPAAVLGYLRAHLRKAEPCRLLKMLVVGPPRQGKSALLEALQTGRNAQFLPA
ECSIRTSDWELERPSSIKGGVDSVSFNVWDIGGPANMSTVNQCFFTDKALYVVIWNLAVG
EEAVANLQSWLLNIEARAPNSAVVVVGTHLDLIDSKFRIERIATLRAYVLALCRTPSGAR
ASGYPDITSKHLYEVSCRTMEGVDGLKKLLYQVACSMRDISSAASCHKLVGRLIPKSYLT
LQEAVQAERLRRDSEDMVLYLTDQQLEQVIEQNPTSDIKDYEDLQTAISFLIETGTLLHF
PDTSHGLCKLYFLDAVWLSECLERIVRLKSSRSVAPNGVILAEDLRMLLVGTGFTQQTEE
QYFQFLAKFEIALPVANNSYLLPHLLPAKPAMDIHGFRLQTHNTIQRHFKMSFVPAGFWE
RFIARMLISLTEMDLQAFENKKNPKSHRNRSTVIYSFAGNQQRNRCSTFRVRRNQTIYWK
EGLQVTFDGGYLSVESSDLNWKRKKSGGIKIICQSEMRDFSAMAFITDHVNALIEQWFPA
LTASESDGTRLIEQYAPCPGCATVARQSEPHPAEPGAAGAVHYFNMEDCVLAAVDKEHIV
CPNHPSEPVPLQELVPELFMTDFPSRLFLEKSELDYSEDEKDILGQGGSGTIIYRAKYRG
QPVAIKRFHFKKCRQQSFCSDTDTMLKHLQSMDASRSFSEFRQEASMLHSLQHPCIVPLV
GISIHPLCFALQLAPLGSLNTVLEERTKGCQYMPLGHMLTFKAAYQIAVGLAYLHRKNII
FCDLKSDNILVWSLEVCDPVNFKLSDYGISRQSFHEGALGVEGTPGYQAPEIRPGIVYDE
KVDMFSYGMVLYELLSGLRPVLGHHQLQIAKKLSKGIRPVLGSPEEVQFYCLQALMLECW
DTKPEKRPLAMPLLRHMQEPSFPCCRYLLACERHRQLFLSTQQGHSAVFWDGEMDDRNYT
VVNLAKGQVEVKRMPCPGMRLSCQMKMENTLWTATEEQEVLIYSLKEMCPLSQPQKRLSF
PAVVTCLFLVPAQKETLPLVFVGMADGLVSVHTLVDDMPTDGETYLCSHSLNKSEFGLRD
DDPRQNPYPVRCMAQVRSGSELWYSNGPGVLVIKCPSLQATRRLDPYRPPSSVTSLVCSP
SCWGDEAVWCLDDLTNTLLMYHASSYQLCASYHCGDGNPLRDVFPIQRPAGRTAALPRPA
SDRDSSGEEEDEEEEEVPGEGDPVVVMHSEDAGTQILRRDDSLTDYCSLSTSGFFSEPGE
GDTELLERSSSGALSSLASTSSMPFSTDTEDTSTVPSPVTETPEPPTQNHSPPHLQALTV
LPVSDTVWVPRRGGDIMVIEVQENGGLLRGRVIAVLSAPGTPQHGTLVEAALVAKDTVVC
GFRNENMEWCLAVWRGWGARELEVFYQSYEKLGSLETSMRKRR
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttactggtctgttggagtctcagaggaccagggagccacaagtagcatggga
gagcaagatggcgccgccgacatgggagccaaacagtctgtcttgggaaacttctccttg
ggccagtcgccgacactcgagaacatccaggcggcctacagggacggggagagcggccga
gcgcaggatctgatcaggatatcctgcaaggagagcggcgggctccggccagagcggcag
gagctgctgtgtgtagctgctcagtatggggatgtggagagcgtgcgatacctgctgaga
gaggtcagggtacccatcccccaagagaccggagagaagaaccccgccatccaggccgct
cactcgggccagcaccacgtggtcagagagctgctcgactccataccctcgcattgtctg
cgcagggacctgctgaattggatgttggcgacagcatgccagcaaggacacctggaggtg
gtgaagctgctggttcttagttaccaggccgatgcagaggactgtgccatacacaacaat
gagtttgcagtcatcacgggcctgccattatatgctgcagcaagagcaggcaaaaaggag
atcgccaccttcctgctggagaatggggccggcttctcctcctacaccttgatggaccac
cccgacttcagccgagagctgctgcgtcagcgcctcctagagacaacccccggcgcagag
accagtgggaccacggaggaggctctttcagtgcagtggtcaggcctgaagctgccatgg
ctggagctggactggtttatggatgtgtcgtcacggatcacccatctggacctgtccaga
aacagcttgagctccctgccctccgtggtgccatggggcctgattgagctgcgcagcctg
gacctgtcatgcaaccagctcaaggagctgcccagcacccagtcctcccaggagatcatc
tgcacacgattacgccacgtcagtctatctgagaacgagctggccagcctgcctcccggg
ctccttcacatgtgccaactccagaggctcagcgccgctaagaacaaacttacttccctg
tttgaggtccctaatgggaccaactggataggtctgcgcaagctgcaggaattggacgtg
tcagacaacagcctgagcagcctgccctcgccagtactgcactgctttaagtccctgtgc
agcctgaacgtctccaggaacaagctggcgtccttccctgacccatgggcctgccctctg
aaatgtttaagagcatcctgcaaccaaattgagagcctgcctgatttgatctccattttc
tggaggactcatctgagggaagtggatttctctgacaatgccctcaaggaactgccctcc
tacatctttgagctggaggccattgtgtccctgaggctgtgtggaaatcaaatctcttct
ctgcccgcacccaataaatggaagtgctcacagctgagaacacttgatctgtccaggaac
caactggggaagagtgaggaatcaactaaaaccaggaagttgggctttttcaccacatgg
caaaggagagaccctgatccagtgtcgcccatccagtttccagtaatactgcgggattcg
ttggaagtactgttcttgaacgacaaccagctggactacgttcccccttccgtgtgtagt
ctgaaaactctctccgagctctatctgtccaacaacactggcattcaggagctgcccgca
gagctcggccaacttcccaacctctggcagctggacatcgaggacctcaatatcaacaat
gtcccgcccgaggtcaggaaggaagggccagctgccgttctggggtacctgcgtgcccac
ctgaggaaggcggagccatgtcggcttcttaagatgctggtggtggggccgccacggcag
ggcaagagcgccctcctggaggccctgcagacgggccgtaacgcccagttcctgcccgca
gagtgcagcatccgcacctccgactgggagctggagcgacccagcagcatcaaggggggg
gtagactcggtgtccttcaacgtgtgggacattggtgggccggccaacatgtctacggtc
aaccagtgcttcttcacagacaaggccctgtacgtggtcatctggaacctggcggtgggg
gaggaggcggtggccaacctgcagtcctggttattaaacattgaggccagagcgccaaac
tcagctgtggtggtggttggcacgcatctggatctcatcgatagcaagtttcgcattgag
aggattgccaccctgcgggcctacgtgctggcgctctgccgcactccctctggagccagg
gccagtggctaccctgatatcacctcaaaacatctatatgaggtgtcctgtaggactatg
gaaggtgtggatggactaaagaagctcttgtatcaagtggcctgctctatgagggacatc
agcagtgcagccagttgtcacaaactggttggaaggctgatcccaaaaagctacctgacc
ctccaggaggcagttcaggcagaacgattgaggcgagactctgaggacatggtcctgtac
ctgaccgaccaacagctggagcaggtcatcgaacagaaccccaccagtgacatcaaagac
tatgaagatctacagacagccatcagcttcttgattgaaacgggcaccttgttgcacttc
cccgacacctctcacggcctgtgcaagctctacttcctggacgcggtgtggctgtccgag
tgcctggagcgcatcgtccgcctgaagagctcgcgctccgtggcccccaacggcgtgatc
ctggccgaggacctgcgcatgctgctggtggggacgggcttcacccagcagacggaggag
cagtacttccagttcctggccaagtttgagatagcgctgcccgtggccaacaacagctat
ctgctcccccacctcctccctgccaagcctgccatggatatccatggcttccgcctgcaa
acccacaacaccatccagcggcacttcaagatgagttttgtgccagcaggattctgggag
cgcttcattgccaggatgctgatcagcttgactgagatggacctgcaggcatttgagaac
aagaagaatccaaaaagccacaggaacagaagcacagtcatttacagttttgctgggaac
cagcagcggaaccgttgcagcactttccgtgtccgacggaaccagacaatctactggaaa
gaaggactccaggtgacttttgacggaggatacctaagcgtggaatcatctgacctgaac
tggaagagaaagaagagtgggggcattaagatcatctgtcagtcggagatgagggacttc
tcagccatggccttcatcaccgatcatgtcaacgccctcatagaacagtggtttcctgcg
ctgacggcgagcgagagtgatggcacccggctcatagagcagtacgctccctgcccgggc
tgtgccaccgtggcccggcagagcgagccccacccggccgagcctggtgccgccggtgct
gtccactacttcaacatggaggactgcgtgctggcggctgtggacaaggagcacatcgtg
tgtcctaaccaccccagcgagcccgtgcctctgcaggagctggtgcctgagctcttcatg
accgacttcccctcacggctgttcctggagaagagtgagctggactacagcgaggatgag
aaggacatccttggccaggggggcagtggcactatcatctacagggccaaatacaggggt
cagcctgtcgccatcaaacgcttccacttcaagaagtgccgtcagcaatccttctgcagt
gacacagacacgatgttgaagcatctgcagtcgatggatgcctcgcggagcttctcggag
ttcaggcaggaggcgagcatgctgcactcactgcagcacccgtgcatcgtgcccctggtg
ggcatcagcatccaccccctgtgtttcgccctgcagctggctccgctgggcagcctcaac
acggttctggaggagcgcaccaaaggctgtcagtacatgcccctgggccatatgctgacc
ttcaaggcggcctatcagatcgcggtggggctggcctacctgcacaggaagaacatcatc
ttctgcgacctcaagtctgacaacatcctagtgtggtccctggaagtgtgtgatccggtg
aacttcaagctctcggattacggaatatcacggcagtcgttccatgagggggccctgggg
gtagagggaacgccaggataccaggccccagagatcagaccagggatagtctacgatgaa
aaggtggatatgttctcctacggcatggttctgtacgagctgctgtcgggtctccggcct
gtactcgggcaccatcagctgcagatcgccaaaaagctctccaagggcatccggcccgtg
ctgggcagcccggaggaggtgcagttctactgcctgcaggcgctcatgctggagtgctgg
gacaccaaaccagagaagcgtcctctggccatgccgctgctgaggcacatgcaggaaccc
agcttcccctgctgcaggtacctgttggcctgcgagagacaccgccagctcttcctgtcc
acgcagcagggccacagcgcagtcttctgggatggggagatggacgacagaaactacact
gtggtgaatctagccaaaggtcaagtggaagtgaaacgaatgccctgcccaggaatgagg
ctcagttgtcaaatgaagatggagaacactctgtggacggcgactgaggagcaggaggtg
ctgatctacagtctgaaggagatgtgtcccctcagccagccccagaagcgcctctccttc
cctgccgtggtcacctgtctcttccttgtacctgcccaaaaagagacactaccgctggtg
tttgtaggcatggccgatggcctggtgtccgtgcacacgctggtggacgacatgccgaca
gacggggagacgtacctctgctcccactccctcaacaagtccgagttcggcctgagggac
gacgacccccggcagaatccctacccggtgcgctgcatggcccaggtgcgcagcggctcg
gagctctggtactccaacggcccgggcgtcctggtgatcaagtgccccagcctgcaggcc
acccgccggctggacccctaccgccccccgtccagcgtgacgtctctggtctgctccccc
agctgctggggggacgaggccgtgtggtgcctggacgacctcaccaacacgctgctcatg
taccacgctagcagctaccagctctgcgccagctaccactgcggagacggcaaccccctc
cgggacgtgttccccatccaaaggccagcggggaggacggcggccctgcctcgcccggcc
tcggacagggacagctcaggggaagaggaagatgaagaagaagaggaggtacccggtgag
ggtgaccccgtagtggtcatgcacagcgaggatgctgggacgcagatcctccgcagggac
gactcgctgacggactactgctccttgtccacgtccggcttcttctcggagccgggggag
ggggacacggagctgctggagcgctctagctctggcgccctgagctcgctggccagcacc
tccagcatgcccttctctaccgacaccgaggacacctccaccgtcccctcccccgtcacc
gagacaccggagccccccacccagaaccactcccctccccacctgcaggccctcaccgta
ctgcctgttagcgacacagtgtgggtccccaggcgtggaggggacatcatggtgatcgag
gtgcaggagaatggtggcctgcttagaggccgtgtcatcgccgtgctcagtgccccagga
acaccgcaacatggaaccctggtagaggcagcgctggttgcaaaggacactgttgtgtgt
ggctttcgcaacgaaaacatggagtggtgcctggctgtctggaggggctggggagccaga
gagctggaagtcttctaccagtcctacgagaagctgggaagcctggagaccagcatgcga
aaaagaaggtag
DBGET
integrated database retrieval system
