Clupea harengus (Atlantic herring): 105906511
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Entry
105906511 CDS
T09045
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105906511 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105906511 (nob1)
03051 Proteasome [BR:
char03051
]
105906511 (nob1)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
105906511 (nob1)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105906511 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DZR_2
HypA
DZR
Zn_ribbon_15
Zn_ribbon_8
DUF7129
Motif
Other DBs
NCBI-GeneID:
105906511
NCBI-ProteinID:
XP_012690118
Ensembl:
ENSCHAG00000025319
UniProt:
A0A6P3W5F4
LinkDB
All DBs
Position
6:complement(19879901..19886098)
Genome browser
AA seq
505 aa
AA seq
DB search
MDAATVEHVVADAGAFLKKAPLQEIGQNIYTLKDVVDEIRDKPTKRSLSFLPYTLIFKDP
FPEHIRFVTEFAKKTGDYPSLSATDIKVLALTYQLELEKVGSSHLKSEPDIKVQVCSTRR
HPEAPVNIAGFHFPQKKTSEPHVHSQANRETYAHSQDSDNVEFSSFQFWRTTLPNIEADL
LEMLNIKDITEPNVQSPAQTHDVTSWPSETVAFNSFQFWRAPLPSIDSDLLELLGADAIS
AVGGEVSETLESVHLSSEENTSIDSGKGEDLDIVSTGSQEESEEEKEKGDDDDEDDGGGW
ITPSNIRQLKFDASHGKPAADVKVGCVTTDFAMQNVLIQMGLNVLSVNGMLIKQTRNYIL
RCHACFKTTTNMNKNFCPHCGNNTLRKVAVTISEDGSTQMHFSRNPKVLNPKGLRYSLPK
PQGGKHASNPHLVEDQQFPQQRVSRKARQKTEAFDPDYLAGNSPFIENDVYSRSANLHIR
DTQGVGGGRRRANPNAAHKKFVKKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccacggtggagcatgttgtcgcagatgctggagcgtttttgaaaaaggcc
ccacttcaggaaattgggcaaaacatctacacattgaaggatgtcgtggatgaaattcgg
gacaaaccaacgaaaagaagtttatccttcctaccctacacccttatcttcaaggaccct
tttccagagcacatacgattcgtgaccgaattcgccaaaaagactggagactaccctagc
ctctccgccacagacatcaaagttttggctttgacttaccagcttgaactggagaaagtc
ggttccagccacttaaaatctgaacccgatataaaggttcaagtttgcagcacacggcga
catccagaggctccagttaacattgctggattccactttccccaaaagaaaacctcagag
ccacatgtccacagccaagccaacagagagacctatgcacactctcaggattctgacaat
gttgagtttagcagcttccagttctggaggactactttacctaacatcgaagctgacctc
ttggagatgctgaatatcaaagacattacagagccaaatgtccagagtccagcccagact
catgatgtgacatcttggccctctgagactgtagcgtttaacagctttcagttctggaga
gctcctctacctagcattgactctgatcttttggaactacttggtgcagatgctatctct
gctgtaggcggtgaggtgtctgagacgctggagtctgtgcatctgtcttcagaggaaaac
acttccattgactctggaaagggcgaagacttagacatagtcagcactggctctcaagaa
gaaagcgaggaagagaaggagaagggtgatgatgatgatgaggatgatggtggcggctgg
atcactccaagcaacatcagacagctcaaatttgatgctagccatggcaaacctgcagca
gatgttaaagtgggctgtgtaaccactgacttcgcaatgcagaatgttctcattcagatg
ggactgaatgtcctgtctgtaaatggcatgctcatcaagcagacgaggaactacattttg
cgctgccatgcgtgtttcaagactacgaccaacatgaacaagaatttctgtccacactgt
ggcaacaacacattaaggaaggtggctgttaccatcagtgaggatgggagcacacagatg
catttctccaggaaccccaaagttttgaacccaaaaggactgaggtattccttgccaaag
ccacaaggtggtaaacacgccagcaatccccacctggtggaggaccagcagtttccccag
cagagggtgtccagaaaggcacgccagaagactgaggctttcgacccagactacctggct
ggcaactctccatttattgaaaacgatgtctacagccgttctgccaacttgcatattcgg
gacacccagggtgttggtggtggccgccgtcgtgctaaccccaatgctgcccacaagaaa
tttgtcaaaaagaaatga
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