Clupea harengus (Atlantic herring): 105906533
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Entry
105906533 CDS
T09045
Symbol
scube2
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 2 isoform X1
KO
K24706
signal peptide, CUB and EGF-like domain-containing protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105906533 (scube2)
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
105906533
NCBI-ProteinID:
XP_031425281
Ensembl:
ENSCHAG00000025898
UniProt:
A0A6P8FNU5
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All DBs
Position
6:complement(21995560..22014315)
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AA seq
1022 aa
AA seq
DB search
MGAICIARDFCLFLLLLNTRQSAALPHNRDADQCADGSDGCHIDAICQNNQASYKCTCKT
GFKGDGTHCGDIDECDIEHNGGCVHECHNIPGNYRCTCHDGFNLAHDGHNCLDVDECLFN
NGGCQHVCVNTMGSYECRCKEGFFLSDNQHTCIHRSVEGLSCMNKEHGCAHICKETPKGG
VACECRPGFELAKNQRGCILTCNHGNGGCQHTCEDTEQGPICKCHVRYTLNPDGRSCVER
DEAATDTTDHNATSLAEVDKRVKRRLLMENCAVNNGGCDCTCKDTSTGVRCSCPVGFTLQ
PDGKTCKDIDECEPHNGGCDHFCRNTIGSFECSCHKGFKLLTDERSCQDIDECFFERTCG
HTCVNSPGSFKCICNKGYTLYGLAHCGDVNECSMNNGGCQHRCENSMGGFECHCNPGYKL
HWNKKDCNEAEGLHAVKSPAKPTLNCGKQGGGDRCFLTCQSQVHISSGAADSYTVTCGMP
LPCFTEGQRNESGSYCQGSDTLHTPRIKTTATFKAGMGKCNLKKSQEKLLEGFNNALSDR
KLSGTENVQFSFVSLHCSSSSKRSRSRHGRKAGEEDGSSITAEFELDVSLEEVTAEGCDL
TCVRRRSEKRLRKTIRTLRKSINREQFHLHFAGSEYEMGKKAARPVDLLEHCGTGHVLVD
KKCVSCSVGMFYDGEQGRCVLCPAGMYQDEEGQVSCEPCPGPEGRVTPRTVGARNIPECG
GQCFPGQYSHDGLIPCQPCPLGTYQPEVGRTFCFPCGGALITKHSGAVSFQSCETKVQCS
PGHFYNTSTHRCIRCPMGSYMGEFGQNHCVACPGNTTTDFDGSTSITQCKNRQCGGELGN
YTGYIESPNYPGNYPANIECNWTITPPPKRRILIVVPEIFLPIEDECGDYLVMRKTHLPN
SVTTYETCQTYERPIAFTSRSKKLWVQFKSNEGNSGRGFQVPYVTYDEDYQELIEDIVRD
GRLYASENHQEILKDKKLMKALFDVLAHPQNFFNYTAQESREMFPKSFIRFLRSKVLRFL
RP
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgggagctatttgtattgcccgggacttctgtttgtttttgctcttgttaaatactcgt
caaagcgcagcgcttcctcacaatcgtgatgcggaccagtgtgctgatggaagtgatggc
tgtcacattgacgcaatttgccaaaataaccaagcttcatataagtgcacttgtaaaaca
gggtttaaaggggacggtacacactgtggagacattgatgaatgcgatattgaacacaat
ggtggctgtgtacatgaatgtcacaacataccaggcaattatcgatgcacttgtcacgat
ggattcaatttagcgcacgacggtcataactgtctagatgtggacgaatgtctctttaac
aatggtggctgtcagcatgtgtgtgtcaacaccatggggagctatgagtgtcgctgcaag
gagggtttcttcctcagtgacaaccagcacacctgcatccatcggtctgtggagggcttg
agctgcatgaacaaggaacatggctgtgcccacatctgcaaagagactcccaagggtgga
gtggcgtgcgagtgtcggccaggctttgagctggccaagaaccagagaggttgcatcttg
acctgtaaccatggcaacgggggttgccagcacacctgtgaggacacagagcaggggccg
atctgcaagtgtcacgtcaggtacactctgaaccctgatgggagatcctgcgtagagaga
gatgaggctgccactgacaccacggatcacaatgccacgtccctggcagaagtggacaaa
cgagtcaaaagacgcctgcttatggagaattgtgcagtgaataatgggggctgtgactgc
acctgcaaggacacatccacgggggtccgctgtagctgtcctgtcggcttcactttgcaa
cctgatgggaagacctgcaaagacattgatgagtgtgagccccacaacggtggatgcgat
cacttctgcaggaacaccatcggcagcttcgagtgcagctgccacaaaggcttcaagctt
ctgacggatgagcgctcctgtcaggatatcgacgagtgcttttttgaaaggacctgtgga
cacacgtgtgtgaactctcccgggagcttcaagtgcatatgtaacaaaggctacactctg
tatggactggctcattgtggagacgtaaatgagtgcagcatgaataacggaggttgtcag
caccgctgtgagaactccatgggcggatttgagtgccactgcaaccctggttacaaactt
cactggaacaaaaaagactgtaatgaggcagagggtttgcatgcagtcaagtcacctgcc
aaacccaccctgaactgtggcaagcagggagggggtgaccgctgtttcctgacctgccag
tcccaggtccacatcagcagtggagctgcggattcctatacggtgacctgtggaatgccc
ttgccctgcttcactgagggacaaaggaatgagtcagggtcgtattgccaaggttcagac
acattgcacaccccaaggatcaaaaccaccgcgaccttcaaggctggaatgggaaagtgt
aacctgaaaaagagtcaagaaaaactgctggaaggatttaataatgctctttcagacagg
aagttgtccggcacagagaatgtccaattcagttttgtgagccttcactgcagttcctcc
agcaagcgctcgcgcagtcggcacgggcggaaggccggcgaggaggacggctcctccatc
acggccgagtttgagctggatgtgagccttgaggaggtaacagcagagggttgtgacctg
acctgtgtccgccggcgctcggagaagaggctccgcaagacgattcgcaccctgcgcaag
tccatcaaccgcgagcagttccacctgcactttgctggctctgagtacgagatgggcaag
aaggcagcccgccctgtggacctgctggagcattgtggcaccggccatgtgttggtagac
aagaagtgcgtgagctgtagcgttggcatgttctatgacggcgagcaggggaggtgtgtt
ctgtgtccagctggaatgtaccaagatgaggaagggcaggtgtcttgcgagccgtgccca
ggcccagaggggagggtcactcctagaactgtgggggctcggaacatcccggagtgtggg
ggtcagtgcttcccagggcagtactcccatgacggcctcatcccatgccagccctgcccg
cttggcacctaccagccagaggtgggacgcaccttctgcttcccctgtggaggggccctc
atcaccaagcacagcggagcggtgtcctttcagagctgtgagaccaaagtccagtgttct
cctggtcacttctacaacactagcacccaccgctgtatccgttgccccatgggaagttac
atgggggagtttgggcagaaccactgtgtggcctgtccagggaacaccaccactgacttt
gatgggtccaccagcatcacgcagtgcaaaaacagacagtgtggaggagagctgggaaat
tacaccggctatattgagtctcccaactacccggggaactaccctgccaacatcgagtgc
aactggaccatcacgccacctcccaagcgcaggatcctgatcgtggtgcctgagatcttc
ctccccatcgaggacgagtgtggagactacctggtcatgagaaaaacacatctgcccaac
tctgtgacgacgtacgagacgtgtcagacatatgagcggcccatcgccttcacctcccga
tccaagaaactgtgggtccagttcaagtccaatgaagggaacagcgggaggggcttccag
gtcccttatgtaacatatgatgaggattaccaggagctgattgaagacatagtcagagat
ggaagattatacgcctctgagaatcaccaagaaattcttaaggacaagaaacttatgaag
gccctgtttgatgtccttgcgcatccacaaaacttcttcaattacactgctcaggagtca
agagaaatgttcccgaaatctttcatccgattcctgcgctccaaggttctgcggttcttg
cgcccctag
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