Clupea harengus (Atlantic herring): 105906549
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Entry
105906549 CDS
T09045
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04371
Apelin signaling pathway
char04514
Cell adhesion molecules
char04520
Adherens junction
char05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105906549
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105906549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105906549
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105906549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105906549
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105906549
04090 CD molecules [BR:
char04090
]
105906549
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105906549
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105906549
CD molecules [BR:
char04090
]
Proteins
105906549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Big_13
TM_ErbB1
Big_9
BACON_2
Motif
Other DBs
NCBI-GeneID:
105906549
NCBI-ProteinID:
XP_031425152
Ensembl:
ENSCHAG00000023677
UniProt:
A0A6P8FPU2
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Position
6:complement(19833472..19842709)
Genome browser
AA seq
896 aa
AA seq
DB search
MEACRCLRLGAIVLVLQTLSYAVSEHTSCTPGFDSELYVFKVDRVNLHIGRRLGKVVFND
CTGRTQTLFNSVDTRFKVDMDGTVKLKRQVTLHDGHKRFSVHAWDSQGRKHTVALRVELD
QPRHNQHQHLHHPHQVDLLQLTQPNVTEAVPTVPVLLFPKSFGGLRRRKRDWIIPDIKMP
ENTRGPFPELLVQIKTSHSKELKIVYSITGAGADQPPLNLFTIDAETGTLYITQPLDREK
QAHYLLLAHAVAVGGTQAEDPMELKVIVIDQNDNKPIFTQNPFLGSVAEASKIGTGFMKV
VATDADEPKNANSDVRYKILSQDPLVPNNAFSINPVTGDILVNSAGLDKEKISKYTLEIQ
AADLVGEGLTAFCKAEITVTDSNDLAPQFEQLLYTVSVPENKVGQVVVLMPVTDGDDPNT
PAWATKFKIISGDSAGMFSITTGPNKQEGIITTAKPLDFEAISKYTLVVAVENEVDFAMP
LPTSTAQVVVNVVDVNEAPFFSPAEKRISKPENVPKDTNLVLYSASDPDTAMNQKLTYKV
GSDPAGWLSVVKETGMIKVKSEMDRESTFVKDGQYKALILAMDDDIIPATGTGTLIIQLE
DVNDNAPAIVERVVEFCNDETVPVLLTVIDKDDVVNGAPYRVELKGESASNWTARMNDTK
TGIILTTKTKLKEATYSVRLMVSDNHGLNQISTVEATVCNCKGANIECLTKGTLSEAGIP
LPIILGILGSILALLLLVLLLLMFMRRKSNVKKDPLLPEDDLRDNIYYYDEEGGGEDDQD
YDLSVLHRGLDNRPEIFRNDVIPTFMPAPQYRPRPANPEDIGNFIDDNLKAADNDPTAPP
YDSLLVFDYEGAGSEAGSLSSLNSSSSGGDQDYDCLNEWGPRFKKLADMYGGGEDE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttgtaggtgcttgcgcttgggagctattgttctcgttctccagacactatcg
tatgcagtttctgaacatacatcatgcacacctggctttgactcagagctctatgtattc
aaagtcgacagagttaatcttcacattggcaggaggcttggtaaagtggttttcaatgac
tgcacaggccgcacacaaactctcttcaactcggtggatacgcgatttaaagtggacatg
gatggaacggtgaagctgaagagacaagtgactctgcatgatggacacaagaggttttct
gttcacgcctgggactcccaaggcaggaagcacacagtggctctgcgtgtggagcttgac
cagcctcgccacaaccagcaccaacacctgcaccacccccaccaggtggacttgctccag
ctcacacagcccaatgtgactgaggcagtcccaactgtgccagtcctgctgtttccaaag
tcatttggtggtctaagaaggaggaagagggattggatcatccctgacatcaaaatgcct
gagaatactagaggcccttttccagaactattggtgcagattaaaaccagccattcaaag
gagctgaagatcgtctacagcattactggtgcaggagcagaccaaccccctctgaacctt
tttacaattgatgcagaaactggaacgctttacatcactcagcctttggacagagaaaag
caggctcactatttgctcttagcccatgcggtggcagttggtggtactcaagcagaagac
cccatggaactcaaagtcattgtaatagaccaaaatgataacaagcctatctttacacaa
aatcccttcctgggaagtgttgcagaagcatcaaaaataggtactgggtttatgaaagtt
gttgccactgatgctgatgagcccaaaaatgcgaactctgacgtcagatataaaattctg
agtcaagatccacttgtgccaaacaacgccttctccatcaatcctgtcacaggagatatc
ctggtgaactctgcagggctggataaagagaaaatctctaagtacactttggaaatccaa
gcagctgatctggtaggagagggtctaacagccttctgcaaagcagaaatcactgtaacc
gacagcaatgacctggctccgcagtttgagcagcttctgtacacggtgtctgtccctgag
aataaagtggggcaagtggtggtgctgatgcctgtaacagacggagatgatcccaacacc
cctgcctgggcaacgaaattcaagatcatcagtggagacagtgcggggatgttcagcatc
acgacaggccccaacaaacaggagggcatcatcactacagccaagcctctggactttgaa
gcaatttccaagtacacacttgtggtagctgtggagaatgaagtcgattttgccatgcct
ctgccaacatccactgctcaggtggtggtcaatgttgtggatgttaatgaggctcccttc
ttcagtccagcagagaagagaatttccaagcctgaaaatgtcccaaaagacaccaacttg
gtcttatactcggcctctgatcctgacacggccatgaatcagaaattgacgtacaaagta
ggcagtgatccagctggttggttgagcgttgtcaaggaaaccggaatgattaaagtgaag
agtgagatggaccgcgaatctaccttcgtaaaagatggacagtacaaagctctcattctg
gctatggatgacgatatcatccccgccaccggcactggaactctcataattcagttagag
gatgtgaatgacaacgctccagccattgtggagagggtggttgagttttgcaatgacgag
actgttcctgtgctgctcacagtaatcgataaagatgatgtagtgaacggtgctccttac
cgcgtggagctgaaaggggaatcggccagtaactggactgcgcggatgaatgacacaaaa
actggcattatactcacgacaaagaccaagttgaaggaagcgacatacagcgtcaggtta
atggttagtgacaaccatggcttgaaccaaataagcactgtagaagccacagtgtgtaac
tgcaagggagccaacattgaatgcctgacaaaagggaccctcagcgaagctggaattcca
cttcctattatccttggaatcctgggttccatcctggccctgctcttgttggtgctgctc
ctgctcatgttcatgaggaggaagagtaatgtgaagaaggatcctctccttccagaggac
gacctcagggacaacatctactactatgatgaggaaggtggaggagaagatgaccaggat
tatgacttgagtgtgctgcacagaggcctggataaccggcctgagatatttaggaatgat
gtgattcccaccttcatgcctgcaccacagtaccgtccccgccctgccaaccctgaggat
attgggaactttatcgatgataatctgaaggcggctgacaacgaccccacggccccgccg
tacgactcgctactagtgtttgactacgagggcgcgggctccgaggctggctccctcagc
tccctcaactcctccagctccggaggcgaccaggactacgactgtctcaacgagtggggc
ccacgctttaagaagctggctgacatgtatggaggaggagaggatgaataa
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