Clupea harengus (Atlantic herring): 105906632
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Entry
105906632 CDS
T09045
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105906632 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105906632 (chrne)
Ion channels [BR:
char04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105906632 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
105906632
NCBI-ProteinID:
XP_012690268
Ensembl:
ENSCHAG00000001547
UniProt:
A0A6P3W619
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Position
8:26030981..26041373
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AA seq
519 aa
AA seq
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MAALSVWTCVAAVAIALFSRQVVGGNAEVDIIKEIFKNYNKNIRPAANASDKVEVQVKLT
LTNLISLNEKAETLTTSVWLELQWTDYRLSWDEGTHQMEVIRVPSHLVWLPDIGLENNID
GKFDVAYYANVLIYSSGYVYWLPPAIYRSTCAIEITYFPFDYQNCTMVFRSQTYSPNEVE
LKLAIDEETSEPIEWVVIDPEAFTENGEWAIKHRPARKIINNKYTPDDLEYEEIFFYLII
QRKPLFYVINIILPCSLISSLVLLAFFLPAQAGGQKLTVSISVLLAQTVFLILIGGKIPE
TSLSVPLIGKYVIFVMSVTTIIVTNMIIVLNFSLRTPSTHTMSPSIRHLFLQVVPRFLGM
NALVDDGEGDREMGGEAARERRRSSFGLMQRAEEYVLKQPRSEMMFDRQRERHGLTRSFV
DDIDVSTTATLYKSLADAAPEIKECVDACNFIAESTKQQNDVGSEVESWVLIGKMIDKVC
FWVALLLFALGTVAIFLTGHFNQAPEFPFPGENKPYTPP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctgtccgtttggacgtgcgtggctgctgtggccattgctctgttctccaga
caagttgtgggagggaatgcagaagtagacatcatcaaagaaatctttaaaaactacaat
aagaacatccgccccgcagcgaacgcctcagacaaggttgaggtgcaggtgaaactgacc
cttaccaacctcatctccttgaatgaaaaggcggagactctcactaccagtgtttggctt
gaactacaatggacagattatcgtttgtcatgggacgaaggaacccaccagatggaggtg
atccgcgtgccctcccacttggtctggcttcctgacatcggcctggagaacaacattgat
gggaagtttgatgtagcctactacgctaatgtcctcatctactccagtggatacgtgtac
tggcttccccccgccatctaccgaagcacctgcgccattgagattacctacttccccttt
gattaccagaactgcacaatggtcttcaggtctcaaacctacagccctaatgaggtcgaa
ctcaaactggctatcgacgaagaaacttccgaacccattgagtgggtggttattgaccct
gaggctttcactgagaatggagagtgggcaatcaaacataggccagcccgaaagataata
aacaacaagtatactccagatgacctggaatacgaggagatctttttctatctgatcatc
caaaggaaaccacttttctacgtcatcaatattatcctgccttgctcgctcatctcctct
ttggtcctgctggccttcttcctcccagcccaagctggtggacagaagttgaccgtatcc
atctctgtgctgctggcccagactgtgttcctcatccttattggtgggaagattccagag
acatcattgtctgtccctctgattggaaagtacgtgatcttcgtaatgtcggtgaccacc
atcattgtcacaaatatgattattgtgctcaacttctccctccgcacgcccagtacccac
accatgtctccctctatcagacatctcttccttcaggttgtccctcgcttcctgggcatg
aacgctctggtggatgacggagagggcgacagagagatgggtggggaggcagcgagggaa
cggcgacgcagctcgttcggcctgatgcagcgggccgaggagtacgtgctgaagcagccg
cgcagcgagatgatgttcgaccggcagcgggagcgccacggcctgactcgctccttcgtg
gatgacattgatgtgagcaccacagccaccctttacaagagcctcgctgacgcggcacca
gagattaaagaatgtgtggatgcctgtaacttcatcgcagaaagcaccaagcaacaaaat
gacgttggatccgaagtggagagctgggtgttgattgggaagatgattgataaggtgtgc
ttctgggtggcccttctgctcttcgctctgggtaccgtggccatcttcctcacgggacac
ttcaaccaggctcctgaatttcctttccctggtgaaaacaagccatacactcccccttaa
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