Clupea harengus (Atlantic herring): 105906709
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Entry
105906709 CDS
T09045
Symbol
stx18
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04130
SNARE interactions in vesicular transport
char04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105906709 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105906709 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105906709 (stx18)
Membrane trafficking [BR:
char04131
]
SNARE
Syntaxin (Qa)
Stx-rER
105906709 (stx18)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF7165
DUF7006
Motif
Other DBs
NCBI-GeneID:
105906709
NCBI-ProteinID:
XP_031443031
Ensembl:
ENSCHAG00000000600
UniProt:
A0A6P8GYH5
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Position
20:complement(25120074..25140587)
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AA seq
320 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAIGLALDSQKEELFKKSRSSNGFSSKAKEVISNITKLKD
FLLQHRKDYVNMGSLISSDLTRMTDSERDQIDQDAQIFMRTCSDAIKQLRMEAERQVISL
QIKEHHGAMLDLVEVYLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHQSKVKTPEPTVQ
KAQKEESSEKTVSEVSGSSAHLWEDSKTEDELSPEEIQMFEQENQRLVSEMSSLVDEVRQ
IEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVGATEDVKEGNEDIREAIKNNAGFRVW
ILFFLVMCSFSLLFLDWYDG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggatattaccttattattcaaagctagtgtcaaaactgtgaaaacgcgcaat
aaagcaataggtcttgctctagattcacaaaaagaggagctatttaagaaaagtcgttcc
agcaatggattttcttccaaagccaaggaggtgatttcaaacatcacaaaactcaaagac
ttcctgttgcaacacagaaaggactatgtgaacatgggcagtctcatctcatcagattta
acccgcatgacagactctgaaagggatcagattgatcaagatgctcagatcttcatgaga
acctgttctgatgctattaaacagctacgtatggaggctgaaagacaagttatctcacta
cagatcaaagagcatcacggtgccatgctagaccttgtagaagtatacctgaaaggtgtg
tgcaaactgtactcagaacagagggctatacgagtaaaacgggttgtagacaagaagcga
ctttcaaggctggaacccgagcatcaaagtaaggtgaagactccggaaccgacagtgcag
aaggctcagaaggaggaaagcagtgagaagacggtgtcagaagtgtcagggagcagtgca
catttatgggaagacagcaaaacagaggatgagctttctcctgaagaaatacagatgttt
gagcaggagaaccagaggttggtcagtgagatgagcagtttggtggatgaagtcaggcaa
atagaaggaaaagtggtagagatctctcgactacaggaaatatttgcagagaaagtcttg
caacaggaaacagagatagacagtattcaccagcttgtagttggtgccactgaagacgtg
aaagaagggaatgaggatatccgagaagctattaaaaacaacgctggcttccgtgtgtgg
atcttattcttcctggtgatgtgttccttctcactcctcttcctcgattggtatgacggc
taa
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