Clupea harengus (Atlantic herring): 105906782
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Entry
105906782 CDS
T09045
Symbol
baz2a
Name
(RefSeq) bromodomain adjacent to zinc finger domain protein 2A
KO
K15224
bromodomain adjacent to zinc finger domain protein 2A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105906782 (baz2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105906782 (baz2a)
03036 Chromosome and associated proteins [BR:
char03036
]
105906782 (baz2a)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
105906782 (baz2a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
NORC complex
105906782 (baz2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Bromodomain
WSD
PHD
DDT
WHIM1
Motif
Other DBs
NCBI-GeneID:
105906782
NCBI-ProteinID:
XP_012690430
Ensembl:
ENSCHAG00000023256
UniProt:
A0A6P3W5W8
LinkDB
All DBs
Position
4:complement(7952925..7976465)
Genome browser
AA seq
2884 aa
AA seq
DB search
MEANNHFNYGPHSSVSANSGLKLSSGDSLYTNGSSMNFPQQGKNINGDMNVNGITTAIGT
SQTGPHPPSSSYPHMTNHHHQGSMAYDYLWGQTQYSPAMSSGPTHAMHQKQGSPGVLQQN
QHHFQSHGQYQVNGAMGTSHQTPVGAAPNVSLGAGQYWNRPNPTQQQGGASMAMGYNSHS
VYGGYQSQVHPGLSPAQHHQQSPMTHQGPPTHHHPHHPHPHHPHAHHHPQQQQHYGMVPN
GMPYYQHQPQHPPQHPPLPSPQPQHPAQHQSLPSPQPQHPAQHQSLPSPQPQHPPTHQQL
ASPQPQHPPQHQTLPSPQHQTLPSPQHPPQHQPLSSPQPQHAPQPQSQMMPPTSQNFTPP
RGSPQHHHIGRGATGSPLPMQVPMMSPSAIPDGGSPQSRDSPLGSSLPLPSVMQGRLGDA
YKEVDKGYNGVERSSVAQRLPKADGYPTRPSAHLLVPTSDYCQRVPHGGMDVEPLHKQRH
DMGGPMREAMHPAMSAPPPLLSTPPRQASSGPPVVSVHHMTASEPPSSSAASASAPPQVG
AKTPHGSPVSAPAPMLSSPPLMVQGLRPMPGAMSPSSLGGGPPELMPTASSMSGPPPLMG
HGSRTAPVPAPPPAVTSPSQVVSTSHPSAPATSAPPLWTSAPPVSAFLHSQMAYVPPQMV
QAPKLQETSKPHSPVSSPSKVAQTHTTGELSPVSAPPVVAPALPSGVSAASSSPPEAPAS
SPLSSSPQKARAPSSSMLSSSQTATSLPDAVSGRAPAAGALVTVPPATTPVSTPPPAVAA
PHRAASVPPAAASSPPAVSAAPQAASVSLPTFGAPPPGAAAPPKAVSALPPVSAPTQAVT
APPGGSMPPLPPPQPVSGLPAVSTTPQAGSAPSVSVPPPASEAASSPPQAAGQASQGSDQ
QDSSDAGTDFSHKAASKKEVRDPQFEKDVAVNNSSKSDPTQAPHSRKSPAGPSDVSTGMS
GHKANSPARNLWPETGKSPAPVKDQDTPRKTASFDDTLDESLDCSSMAELTHIESSRAED
TSIMEGTFDDSMADTSYTDEPSMFTEDSATEDSRQVTADDTQDNSDLSQVDETMDSCLST
RESGTEDDSSQLKDSVSDDSQNDLSQMAADDHDLSKPPGKGPDESEDEESKEKDVDDGRD
APDCAGVPAAAAVKAGTAGTPVSADEGWQETVAAAATDPSPAEQAAKPLPLSTSAVTVAT
TPPPQKPAAKRARAQATAKQGTQASRAAQKKTPAKAPKEEKEKRKRKKNEDKEPPGTRKK
RKLSKDDASDSAIADTILAVSTAGAGKTAADQSLVTSQTTPAKPKKIRKPKGAAPAAGTG
ATTSPKTEGDHSLESGQTPPAKPKKIRKPRQPKVKDGAAKPTKAAKTPKAAKTAKAAKAE
PKETPKADQDNEDEDEGSTTGETQKRRIATEEQVHFPLLHGWKREVRVKKHEDRLKGETW
YYSPCGRRMKQFPEIIKYLRRHECGAVTREHFSFSPRMPVGDFYEERESPEGMKWFLLAN
EEVPSIIMAITGRRGRPPNPDKEKPRARVRRPKGTPGRRPGRPPKTNAVDLLSKVDARML
KRLQAKEVLTDEDKEKMGKIKKKMKRKARLKRKEDTKNKIIRQEKRKAKLEKAKEANDQQ
QDEGKPAQPGQPQSQVPSDQQTPQPATEPKKPGRKKRVQTPEEMEKAGQVKRVAGARSQA
KALAKAQAEAEAKAQAALTAKKQAERRAQAQRRLEERKKQQQILEEMKKPTEDMCINDHQ
PLPELSRIPGVVLSGRAFSHCLEVVEFLHSYGKVLGLQIPKDVPSLSTLQEGLLGVGESQ
NEVMDLLIKLVEAALHDPGLPSYYQSVKILGEKLVDLELSHRTVSECLRIFLESHGFEVD
VCNTLRTKTFQALKPDVKASILAFLVEELNASNTVTRDIDNTLENMSTYRKNKWIIEGKL
RKLKAALVRRTGRSEEELCLEDRRRSTRAGMAEEESLEETTMLDRSSRRGRGVREEPKLT
EAESPTNASIPELERQIDKLAKRQVFFRKKLQQASHSLRAVSLGQDRYRRRYWLMPHMGA
ILVEGPEEVLDSGDILLTDEPMVYPKKEVKVEVEVKSEEPLSPINPAATAATPRSCSPRA
SGSSGGGGPLTEVDPLPGEASLMSSSSPRGRGRPRNIKPEVELHLRTAKNRRRRRSSKSG
GEEPSGDATAKLGTQDLTQAAFTAWLNQAQVDGAQDPATAAAVLAAVAAGGKAPEDGSLS
EEAIKELAEKQAQWFHLLPKKPCDASGLSEPGLPSPNAISSLKESPTSPIKGAPPSTPSL
QAALTALTQTPLQIPIQPGALPPGVATLLPLLPGSVPVPPACSTPVQKPTRRRRRGSSPA
RRPYSRPSTGKRRGRPPSTLFQEIEQKYLTQLVVKPIPKEMVRGWWWVKQPEELTAILQA
LHPRGVREKVLHKHLTKHLEFLSEVCSRPSSDPVFKRELEKGSSVLDILTKPWPEMHKCL
QADINALQWVEDLEQRVLAADLHLKMAPQSGKSNTEGNTEEPVAGFQAYTVPEPDSTRED
LEFYEHEVDPRDDWIVRTKREWSDLLRVPNNPVDLAVHRLANLERNIERRYLKEPLWNLA
EVMRLAPLTPPPGEEVPMDVVSLEMEITPRLRTWRQGLDRCRSAAQLSLCVLQLERAIAW
EKSVVKVTCQVCHKGDNDEYLLLCDGCDRGCHMFCLRPKVTDVPDGDWFCPICVSKMDEG
GMRPQRSARQRARRRKRRLGAYGPESSEEEESPRRLAGMSTRQKDGPSSSASSTNGTSGI
SPSKRRRMTTRNQPDLTYCEIILMEMEAHADAWPFQEPVNPRLVPGYRRIIKNPMDFLTM
RERLLQGGYCSVEEFAADAHLVFNNCELFNEDTSDVGKAGHAMRLFFESRWSEFYQTKDK
EKDK
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaataatcattttaactatggcccacactcgtctgtgtctgcaaactcagga
ctgaagctttcctcaggggattctctctatactaatgggtcctccatgaacttcccccag
caagggaaaaatataaacggcgacatgaatgtgaatggcatcactactgcaattgggacc
agccaaactggcccccaccctccctcgtcatcgtacccacacatgaccaaccaccaccac
caaggcagcatggcctatgactacctgtggggccagacccagtacagcccggccatgtcg
tctgggcccacacacgccatgcaccagaagcagggctcccctggggtcttgcagcagaac
cagcaccacttccagagccacggacagtatcaggtcaatggggccatgggtacctcccac
cagacccctgttggtgctgcgcctaacgttagcctgggggctggccagtactggaacagg
ccaaacccaacacagcaacagggaggtgcatccatggcaatgggctacaactcccatagt
gtgtatggaggctaccagagccaggtgcacccaggcttgtcaccagcccagcaccaccag
caatcacctatgacgcaccaagggcctcccacacaccaccatcctcaccatccacacccc
caccacccccatgcccaccaccacccgcagcagcagcagcactatggcatggtgcccaac
gggatgccgtactaccagcaccagcctcagcatccaccccagcacccaccactgccttca
cctcaaccccagcatccggcccagcatcagtccttaccttcgccccaaccccaacacccg
gcccagcatcagtccttaccttcgccccaaccccaacacccacccacgcaccaacagctg
gcctcacctcagccacaacacccaccccagcatcagaccttaccctcacctcagcaccaa
acccttccctctccccagcacccaccccagcaccagcctctctcatctccccagccccag
cacgcccctcagccacagtctcaaatgatgccccccacgtcccagaacttcacccctccc
agggggagccctcagcaccaccacattggccgtggcgccacaggcagccccctccccatg
caggtacccatgatgtcaccctcggcgatacctgatggtggatccccgcagagccgggac
agccctctgggaagcagtttgccactgccctcagtcatgcaagggcgcctcggtgacgca
tataaagaggtggacaaaggctacaatggggtggagcgctcatctgttgcccagcggctt
cccaaagctgatggatatcccaccaggccctcagcccacctcttagtgcccaccagtgac
tactgccagcgcgtgccccacggggggatggacgtggagccacttcacaagcagcgccat
gatatgggaggacccatgagggaggccatgcacccggctatgtctgcgcctcctccactt
ttgtctacacctccgcgtcaggcttcatcagggcctcccgtagtgtctgtgcatcacatg
accgcctcggaacccccatcctcgtcggccgcctccgcgtctgcacctcctcaggtcggg
gcaaagacgcctcatgggagccctgtgtctgctcctgcccccatgctctcctctcctcca
ctaatggtccaagggttgaggcccatgcctggtgccatgtcgccttcctccctgggaggg
ggtccgccagagctgatgcccacagcctcgtcaatgtcaggtcctccccctctgatgggc
cacggctcaaggacggccccagttcctgctcctcctcccgcagtgacctcgccctctcaa
gttgtgtccacgtcacacccgtctgctccagccacgtcagcacctcctctatggacaagt
gcacctcctgtgtcagccttcttgcactctcagatggcctacgtacctcctcagatggtc
caagcccccaaacttcaggagacgtcaaagcctcactcccctgtgtcttcaccctcaaag
gtggcccaaacccatacaacaggagagctttccccggtttctgcacctcctgtggtggct
ccagctcttccctcgggggtgtctgcagcctcttcgtctcccccagaggcccctgcttca
tctccgttatcctcatcacctcagaaggcccgtgctccttcatcctcgatgttgtcgtcg
tctcagacggctacgtctcttcccgacgctgtttccgggcgagctcctgctgctggagca
ctcgtcacggtgcctcccgccacgactcccgtctcgacaccgcctcccgcggtcgctgct
ccccaccgcgccgcctctgtgcctcctgcggcggcctcctctccccctgcggtgagtgcc
gcccctcaggcagcctctgtgtctcttcccactttcggtgcacctccacccggagctgct
gcacctcccaaagcggtctcggcgctccctcccgtttctgcaccgactcaggcagtcact
gctcctcccgggggctccatgccgcctcttccacctcctcaacctgtctctggactgcct
gctgtttccacgacccctcaggctgggtctgctccgagtgtctcggtgccgcctccggcc
tctgaggccgcctcctctcctcctcaggctgctgggcaagcctcacaagggtcagaccag
caggactccagtgacgctggtacagacttctctcacaaagctgccagcaaaaaagaggtc
cgtgatcctcaatttgaaaaagacgtcgctgtcaacaactcgtcaaaatcggaccccacc
caggctccacactccaggaagtctcctgcaggccccagcgatgtcagtactgggatgtcg
ggccacaaagccaatagcccagctaggaacctttggcctgagacaggaaagtcccctgca
cctgttaaagaccaggacaccccgaggaagaccgcttcatttgatgacacacttgatgag
tctctggactgctcctccatggctgagttgacccacattgaaagctctcgggctgaggat
accagcatcatggagggcacctttgacgactcgatggccgatacctcctacacggacgag
ccctccatgtttacagaggactctgccacagaggactccaggcaggtgactgctgatgac
acccaggataacagcgacttgtctcaggttgatgaaaccatggacagctgcctgagcacc
agggagtctggcacagaggatgacagttctcagctgaaggactcagtgagtgatgactca
cagaatgatctctctcagatggcagcggacgaccacgacctctcgaaaccgcccggtaaa
ggccctgatgagagcgaggacgaggagagtaaggagaaggatgtggacgatgggcgtgat
gctccagattgtgctggcgttcccgctgctgctgcggtcaaggctggcacggctggcacc
ccagtgagcgctgatgagggctggcaggaaacggtagcggcggcggcgacagaccccagc
cctgcagagcaagcggccaaaccgctgcccctgtccacctcagctgtcaccgtggcaaca
acaccccctccacagaagcctgctgcaaagagggccagagcccaagccactgcaaagcag
ggtactcaagcttcccgggccgctcaaaagaagactcctgcaaaggccccaaaagaagag
aaggagaagcggaagaggaagaagaacgaggataaagaacctcccggaacaaggaagaaa
cgcaagctctccaaagacgatgcatctgactcagccattgcagacaccatactcgctgta
agcactgctggcgctggtaaaaccgctgctgaccagagcctggtgaccagtcagaccact
ccggccaagcccaagaagatcaggaagcccaagggggctgcaccggctgctggcaccgga
gcgacaacctctcctaagactgagggagaccacagcctggagtctggtcagactccgcca
gccaagcccaagaagatcaggaaacccagacagccgaaggtgaaggatggagctgcaaaa
ccaaccaaagcagccaaaacacccaaggcagccaaaacagccaaggcagccaaggcagag
ccaaaggagacccctaaagctgatcaagacaacgaagatgaagatgagggctccacaaca
ggagaaactcaaaagaggagaattgccacagaggagcaggttcacttccctcttctgcat
gggtggaagagggaggtgcgtgtcaagaagcatgaagaccggctgaagggagagacctgg
tactacagtccttgtgggaggaggatgaagcaattccctgaaatcatcaagtacctgcgg
aggcatgagtgtggggctgtgaccagagagcacttcagcttcagcccacgcatgcctgtg
ggagacttctatgaggaacgcgaaagcccagagggaatgaagtggttcctacttgccaat
gaagaagtgccctccattatcatggccatcactggcaggcgtggtcgcccacccaaccca
gacaaggagaaaccccgtgcccgggtcaggcggcccaagggcacccctggtcgccggcct
ggcagaccacccaagaccaacgcggtggatctgctgagcaaagtggacgccaggatgctg
aagagactgcaagcgaaggaagtacttactgatgaggacaaggagaaaatgggcaagatc
aagaagaaaatgaagagaaaggcgagactcaagcgcaaggaagataccaagaacaagatt
atcagacaggagaagcgaaaagctaagctggagaaagccaaggaggccaatgaccagcaa
caagacgaggggaaaccagcccagcccgggcagccccagtcccaggtcccctctgaccag
cagacccctcagcccgccacggaacccaagaagcccggacgcaagaagcgcgtgcagacg
cccgaggagatggagaaagccgggcaggtgaagagggtggcgggggcacggagccaggcc
aaggcgctggccaaagcccaggccgaggcagaggccaaggcccaggcagcactgacggcc
aagaagcaggcggaaaggcgggcgcaggcccagaggcggctggaggagaggaagaagcag
cagcagatcctggaggaaatgaaaaagcccaccgaggacatgtgcatcaacgaccaccag
cctctccccgagctgtctcgcatccctggagtggtgctgtcgggccgggccttctcccat
tgcctggaggtggtggagttcctgcacagctacgggaaagtgctgggcttgcagatcccc
aaggacgtgcccagcctcagcaccctgcaggaggggctcctgggcgtgggggagagccag
aacgaggtcatggacctgctcatcaagttggtggaggctgcgctgcatgacccaggcctg
ccgtcctattatcagtcggtgaagatcctgggagagaagctggtggatctcgagctgagc
cacaggaccgtgtccgagtgtctgcgtatctttctggaatcccacggcttcgaggtggac
gtgtgcaacaccctccgcaccaagaccttccaggctctcaaaccagatgtgaaggcctcc
atcctggctttcctggtggaggagctgaacgccagcaacacagttaccagggatattgac
aacacactggagaatatgtctacctacaggaaaaacaaatggatcattgagggcaaactg
cgcaaattgaaagcggcgttggtgcgccggacaggacgctctgaggaggagctgtgcctg
gaggaccggaggaggagcacacgagcggggatggctgaggaggagagcctggaggagacc
accatgctggacaggagcagccggcgcggacgaggagtgcgagaggagcccaaactcact
gaggctgaaagcccaaccaacgccagcatcccagaactggagagacagatagataagcta
gccaagcgtcaggtgtttttccgtaagaagctgcagcaggcctctcactccctgcgggcg
gtgtccctgggccaggaccgctaccggcgccggtactggttaatgccacacatgggggct
atactggtggagggaccagaggaggtcttggactccggtgatatcctgttgacggatgag
cccatggtctatccgaagaaggaggtgaaggtggaggtggaggtcaaatctgaggagcct
ctctcacccatcaaccccgcagccactgcggccaccccacgctcctgctccccccgcgcc
tccggcagcagcggcgggggcggacccctcacagaagtggatcctctccccggtgaggca
tccctcatgagcagcagcagcccgcggggccgaggccgtccgcgcaatatcaagccagag
gtggagctccacctgcgcaccgccaagaatcgcaggcgacgccgcagcagcaagtcgggc
ggcgaggagccctcaggagacgcgacggccaagctgggcacgcaggacctcacccaggcc
gcgttcaccgcttggctcaaccaggcccaggtcgatggcgcccaggacccagccaccgcc
gcagccgtcctggcagcggtagctgcaggaggcaaggccccagaagacggcagcctgtcg
gaggaagccataaaggagctggcagagaagcaggcgcagtggttccacctgctgcccaag
aagccctgcgacgcctcaggtctgtctgagcccggcctaccctctcccaatgccatctcg
tccttgaaggagtcacccacctccccgataaagggcgctccccccagcaccccctctcta
caggctgctctcaccgccctcacacagactccgttacagattcccatacagcctggagcc
ctgcctccaggtgtggctacgcttctcccactgttgccaggttctgtccccgtcccccca
gcatgctccacaccagtgcagaagccaaccaggcggaggaggagaggcagcagtccagcc
cgccggccgtactcccgcccaagtacgggaaagcgccgtggcagacccccctccacgctc
ttccaggagatcgagcagaagtacctcactcagctcgtggtcaaaccaatccctaaagag
atggttcgaggctggtggtgggtgaagcagccagaggagcttactgccatcctgcaggcc
ctacatcctcgtggtgtccgggagaaggtgctgcacaaacacctcaccaaacacctggag
ttcctgtctgaggtctgctcaaggcccagcagtgaccctgtcttcaagcgtgagctggaa
aagggcagttccgtgctggacattctgactaagccctggcctgagatgcacaaatgcttg
caggctgacatcaacgccctccagtgggtggaggacctggagcagcgcgtgctggcagca
gacctccacctcaagatggctccccagagtggaaagagcaacacagagggtaacacggag
gagcctgtggcaggatttcaggcgtacacagtcccggagccagactccacccgtgaggac
ctggagttttacgagcacgaggtggacccacgggatgactggatcgtcaggacaaagcgg
gaatggtctgatctgctgcgcgtgcccaacaacccagtggatctggccgtccatagactg
gccaacctggagcgcaacatcgagcgccgctacctgaaggagccgctgtggaatctggcc
gaggtgatgcgcctggcccccctcaccccacccccaggggaggaggttcccatggacgtg
gtcagtttggagatggagatcaccccaaggctgaggacatggcgacagggccttgaccgc
tgccgtagtgctgcccagctctcgctgtgtgtgcttcagctggagagggccattgcctgg
gagaaatcagtcgtcaaagtgacgtgtcaggtgtgtcataagggggataatgacgagtac
ctgctgctctgtgacggttgtgaccgtggctgtcacatgttctgcctcagacccaaggtt
acagatgtgcccgatggagactggttctgccccatatgcgtctccaagatggacgagggc
gggatgcggcctcaacgctccgcgaggcagcgggctcgccggcgtaagcgccgtttgggc
gcctacggacccgagagctccgaggaggaggaaagcccgcgccggttggcgggcatgagc
acgcggcaaaaggatggtccctcctcgtcggccagcagcacaaacggcacctcgggcatc
tcacccagcaagcgccggcgcatgaccacacgcaaccagcccgacctcacctactgcgag
atcattctgatggagatggaggcacacgcagacgcctggcccttccaggagccagtgaac
ccgcgactggtgcctggttatcgccgcatcatcaagaacccaatggacttcctgaccatg
agggagagactgctacagggagggtactgcagtgtggaggagtttgctgctgatgcccat
ctggtgttcaacaactgtgagctcttcaacgaggacacttcagatgtgggcaaagccgga
cacgccatgagactcttcttcgagagccgctggtcagagttctaccagaccaaggacaaa
gaaaaggataaatga
DBGET
integrated database retrieval system
