Clupea harengus (Atlantic herring): 105906873
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Entry
105906873 CDS
T09045
Symbol
prim1
Name
(RefSeq) DNA primase small subunit
KO
K02684
DNA primase small subunit [EC:
2.7.7.102
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105906873 (prim1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105906873 (prim1)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.102 DNA primase AEP
105906873 (prim1)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
105906873 (prim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_primase_S
Motif
Other DBs
NCBI-GeneID:
105906873
NCBI-ProteinID:
XP_012690560
Ensembl:
ENSCHAG00000021022
UniProt:
A0A6P3W7I0
LinkDB
All DBs
Position
4:9651285..9657058
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AA seq
425 aa
AA seq
DB search
MPEADYDPASLPDLLPLYYRRLFPFSQYYRWLNYGGVTKGYFQNREFSFTLKDDIYVRYQ
SFSTQSELEKEMQKMNPYKIDVGAVYSHRPNQHNTVKSGAFQALEKELVFDIDMTDYDDV
RTCCSAADICMKCWTLMTIAIRILDRALREDFGFRHLLWVYSGRRGVHCWVCDEAARKLS
VAARSAVAEYLSLVKGGEDMVKKVQLSEPLHPFIRESLVVVEKYFPQYAISGQDILGNSK
TVEKVLALVPDEVREDLQTFFQSEKNPMKRWKRLCALVQHQRVSSKKGCQHIDKEIMLQY
CYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLEELDSFDPFDVPTISLTCEELDKP
RDADEEDEVEKENENEMDAAERRKIRDYKRTSLAKYVKLFDRFLDGMARSRKGEMLRKSD
LQKDF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcagattatgatcctgccagtttaccagacttgttacctctatactatcgc
cgactattccctttttcacagtactatcggtggctaaattatggaggggtgacaaagggc
tacttccagaaccgtgagttctccttcaccctcaaagatgacatctatgtccgataccag
tcttttagcacgcagagtgaactggagaaggagatgcagaagatgaacccatataaaatt
gatgttggagctgtttatagccacaggcctaatcaacacaacacagtgaagtctggagca
ttccaagccctggagaaagagctggtgtttgacattgatatgactgactatgatgacgtc
agaacgtgctgcagtgctgctgacatttgcatgaagtgctggaccttgatgactattgct
atcagaatccttgaccgggcactgagagaggactttggcttccggcaccttctttgggtg
tactctggcagaagaggggttcattgttgggtgtgtgatgaagcagcaaggaagctgtca
gtggcagcgcgttctgcggtggcagagtacctcagcctagtaaagggaggcgaggacatg
gtgaagaaagttcagctgtcagaacctctacatcctttcattagagaatctcttgttgtg
gtggagaaatacttccctcagtatgccatttctggacaggacatactgggcaacagcaag
actgtggagaaagtgctggctcttgtgcctgatgaggtgagagaggaccttcaaaccttc
ttccagagtgagaagaaccccatgaagcggtggaagaggctttgcgccctggtgcagcat
cagcgggtgagttcaaagaaaggatgccagcatattgacaaagagatcatgctccagtac
tgctatcccagactggatgtgaatgtcagcaaaggagtcaaccatttattgaagagccct
ttcagtgtccatcccaaaactgggcgaatctctgtgccaattgaccttgaagaacttgac
tcatttgatccctttgatgttccaacaatcagcttgacctgtgaggaactggacaagccc
agggatgcggatgaggaagacgaggtggagaaggagaatgaaaatgagatggacgcagct
gagcggcgtaaaataagagactacaagagaacaagcctggcaaaatatgtgaagctgttt
gacagattcctggatgggatggctcgctcccgcaaaggggagatgctgaggaaaagtgac
cttcagaaggacttctaa
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