Clupea harengus (Atlantic herring): 105906970
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Entry
105906970 CDS
T09045
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105906970 (pax3a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105906970 (pax3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
105906970
NCBI-ProteinID:
XP_031415938
Ensembl:
ENSCHAG00000007641
UniProt:
A0A6P8EIU3
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Position
22:16415479..16438852
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AA seq
491 aa
AA seq
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MTALAGGIPRMMRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSTTPDIDKKIEE
YKRENPGIFSWEIRDKLLKDGICDRNNVPSVSSISRTLRCKFGGSAEDEDEEDEMERRAL
DENERRGKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSLQPYQLSDSPYPPSSISQVSEQASTVHRPQPLPPTSVHQTGLSSTAGAQEGGSAYCLA
SGRHGFSGYSDSFAPPPGHSNSVNPAIGNGLSSQVMGLLNPGGVPHQPQGDFALSPLTGG
LEPNPGMPTSCHSSQRLEGLPGLPSMPSSQSYCAPTYGSPAYSVDHVTSYQYGQYGQSKV
NTAQFLFLSFK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttagcggggggcataccgagaatgatgcgccccacgccgccacaaaactat
ccgagaggaggatactctcttgaagtttccacgccattaggtcagggtcgagtaaaccaa
ctcggtggagttttcataaatggacggcctttgcctaatcatattcgacacaagatcgtg
gagatggcccatcatggcatccgaccatgcgttatctcccgtcagctccgagtgtcacac
ggctgtgtgtccaaaatcctgtgcaggtaccaggagactggatctatccgacccggtgct
ataggaggaagtaaacccaagcagagtacaacgcccgacatagacaagaaaatcgaagag
tacaagagagaaaatcctggtatatttagctgggagatcagggataagttactcaaagat
gggatatgcgaccgcaacaatgttccttcagtgagttcaatcagtcgcactttgcgatgc
aaattcggaggaagtgccgaagacgaagatgaggaggacgaaatggaaaggagagcactg
gacgaaaacgagagaagaggcaaacacagcatcgatggcattctaggcgatagatcgagt
cactctgatgagggttccgatgtggactcagaaccgggcctgcccttgaagaggaagcag
cggcgcagcaggaccaccttcacggccgagcagctggaggagctggagcgggccttcgag
cgcacacactaccccgacatctacaccagggaggagctggcccagagagcaaagctcaca
gaggcacgcgtgcaggtttggttcagcaaccggagagctcgctggaggaagcaggctggg
gccaatcagcttatggccttcaaccacctaatccctggaggcttccccccctcggctatg
tccagcctgcagccctaccagctatcggacagcccctaccctccctcatccatatcgcaa
gtgtcggagcaggccagcacagtgcaccggccccagcctctgccccccacctctgtgcac
cagacgggtctgagctccacggcgggggcccaggagggtggctcggcctactgcctggcc
tccggacgccacggcttctctggctactccgacagcttcgcgcccccgcccggccactcc
aactcagtcaaccccgccatcggcaacggcctctcctctcaggtgatgggtctgctcaac
cccggaggagtgccccaccagccccagggtgactttgccctctctccactgacgggcggc
ctggagcccaacccaggcatgcccaccagttgccacagctcccagcgtctggaggggcta
ccaggcctacccagcatgcccagctcccagtcttactgcgccccgacctacggctccccc
gcctatagcgtggaccacgtcacctcgtaccagtacggccagtatgggcaaagtaaggtg
aatacagcacagttcctatttttatcatttaaataa
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