Clupea harengus (Atlantic herring): 105907011
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Entry
105907011 CDS
T09045
Symbol
cntnap2b
Name
(RefSeq) contactin-associated protein-like 2b
KO
K07380
contactin associated protein-like 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105907011 (cntnap2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105907011 (cntnap2b)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
105907011 (cntnap2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
COLFI
Syndecan
Motif
Other DBs
NCBI-GeneID:
105907011
NCBI-ProteinID:
XP_031415202
Ensembl:
ENSCHAG00000011332
UniProt:
A0A6P8EWB3
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Position
22:18779399..18819883
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AA seq
1315 aa
AA seq
DB search
MRRFPRPGVTLLLWMLGVLGSLSSVRSASLKCDEVLATPLPYSAFLGSSVLSGDYGAGYA
KLNRRGGAGGWSPLDSDRYQWLQVDLRGRKQITAIATQGRYSSSDWTKQYRFLYSNTGSN
WRAYRQDGTIWTFSGNWDSEKAVRHDLQYSIVARYLRIIPLEWSEEGRIGLRVEVYGCAY
WSDVISFDGQSVITYRFRAKKMRILKDLISLKFKTTKGDGVLLHGEGQQGDYLSLELKRA
KLWLQINLGSNQHGSIQGHTAVSSGSLLDDDHWHRVEIERYRRSINFTLDQHTHSFRTNG
EFDHLDLDYEISFGGMAVSNKPISGGRDNFVGCMERIVYNGDNITNLVRRKKVDTSSFRN
LTFSCAESRTFPVFFNATSFLLLPGRSDSDTMSVSLMFRTWNPSGLLLFSTLGYGGVEIS
LVDGKVNVHIYVSQKQSIRVGISSGSGLNDGQWHSVHFLALESFAMLTIDGDETSSVRAA
LPIMIRTGGSYYFGGYFPRTNLSPMQRSFQGCMQLIHVDEQLVDLQAVEQGSLGTFENVS
LDMCAIIDRCEPNHCEHGGRCSQTWDSFSCGCEGTGYTGATCHTSVYEQSCEEYKHLGKT
SNTYWIDPDGSGSLEPFRVNCIMTEDKVWTMVANDLPSQSLVSAELETATVLELNYSMSS
EQINAITSSAEHCEQHVAYACRMSRLLNTPEGSPFTWWVGRGNEKHTYWGGSGPGVQKCA
CGIERNCTEPSHYCNCDADQRQWREDSGILMYKDHLPVIQVVVGDVNRPSSEARLTVGPL
RCQGDRNYWNAASFNTPASYLHFPTFKGENSADISFYFKTSSTYGVFLENLGNADFIRLE
LKSTTTVSFSFDVGNGPVELTVLSATPLNDDQWHRVEAERNVKEAVLQLDGKYKEVRLAP
PQGHTRLQLFSQLFVGASGGQRGFLGCIRSLKMNGVTLDLEERAKVTPGVKPGCSGHCSS
YGMHCQNGGKCLEKYNGYSCDCSLTAFDGPFCTEDVGGYFETGTVVRYDLMSGSGASALR
EGKGVLSPLTTEANLTQEELTFSFSTSNTPSVLIYISARTQDYLAVVLRHNGTLQIRYNL
GGLKEPFTVSLDHRNMANGQPHSVNISRQHRIIHLQLDHYPSVSYTLPEASDTEFNLVKT
IFLGKVFETGQIDPVIIEKYNTPGFVGCLSRVQFNRIAPLKAALRSGISSTASVQGVLVE
SNCGASPLTISPMSAAFDPWHPDSAGAQFPFNEEMVSRDGLNRDSAIIGGIIAVVIFTIL
CTLVFLVRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtttccccagacccggggtaacgttattgctgtggatgcttggtgtcctcgga
agcctcagctcagtgcgctcagcatccctaaaatgtgacgaggtgttggccaccccactg
ccgtacagtgcgttcttgggatcctctgtgctgtctggtgactatggggccggctatgcc
aaactcaacaggagaggaggagccgggggctggtccccactggactcggaccggtaccag
tggctccaggtggaccttcggggtaggaagcagatcactgccatagcaacgcaaggccga
tacagcagctctgattggacgaagcagtacaggtttctgtacagcaacactgggagcaac
tggagggcttaccggcaggacggcaccatatggacgttttctggaaactgggactcggag
aaggcggtgaggcacgacctacagtactccatcgtggcgcggtatcttcgcatcatccct
ctggagtggagtgaggagggccggataggactacgcgtggaggtctatggctgtgcttac
tggtctgacgtgatcagcttcgatggccagtcagtgataacctaccgcttccgggcaaag
aagatgcgcatcctgaaggacctgatctccctgaagtttaagacgaccaaaggggacggg
gtgctgctgcatggagaggggcagcagggggactacctctcactcgagctcaagagggcc
aagctgtggctccagatcaacctgggaagcaatcagcatggctccatccagggccacaca
gctgtgtccagtggtagtctccttgacgacgatcactggcacagagtggagatagaacgc
taccgccggagcatcaatttcaccttggaccagcacacacacagcttccgcaccaacgga
gagttcgatcacctcgacctggattacgaaatcagctttggaggcatggctgtttccaat
aagccaatctctggaggcagagataactttgtgggctgcatggaacgcattgtgtacaac
ggcgacaacatcaccaacctggtccgcaggaagaaagtggatacgtcaagctttcgcaac
ctgacgttctcctgcgcggagtcccgcacgttccctgtgttcttcaatgccaccagtttc
ctgctgctgccggggcgaagtgactctgacacgatgtctgtgagcctgatgttccgcaca
tggaacccaagtggcctgctgctgttctcgacgctggggtatggaggcgtggagatcagc
ctggtggacgggaaggtcaacgtgcatatctatgtctctcagaaacagagcatacgtgtg
ggtatatcatcaggttctgggctcaatgatggccagtggcacagtgtccacttcctggct
ctggagagtttcgccatgctgaccatcgacggcgatgaaacgtcctcagtaagggctgcc
ctgcccatcatgatcaggacaggaggctcctactactttggaggctacttcccccggacc
aacctgtcccccatgcaaaggtccttccagggctgcatgcagctgatccacgtggacgag
cagctggtggacctgcaggcggtggagcaaggatcgctggggaccttcgaaaatgtcagc
ctcgacatgtgtgccatcatagatcggtgtgagcccaaccactgtgagcatggtggccgc
tgctctcagacatgggactccttcagctgtggctgtgaggggacgggttacactggggcc
acctgccacacctctgtgtatgagcagtcttgtgaggagtacaagcacctggggaagacg
tctaacacgtactggatcgacccagacggcagtgggtctctggagcccttcagagtcaac
tgcatcatgacagaggataaagtgtggacaatggtggccaatgacctgccttcccagagt
cttgtgagtgcagagctggagacggccactgtgctggagctcaactatagcatgtcatcc
gaacagattaatgccatcaccagcagtgcagagcactgtgagcagcatgtggcctatgcc
tgccgcatgtcacgtctactcaatacaccagaggggtctcctttcacctggtgggtgggg
agaggcaatgagaagcacacctactggggtggctcagggccaggtgtccagaaatgtgcc
tgtgggattgagcgcaactgcactgaacccagtcactactgcaactgcgatgctgaccag
aggcagtggagagaagattctggaatactcatgtataaggatcatttacctgtcattcag
gtggtggtcggggatgtcaaccggcccagctctgaggccagactcactgtggggccttta
cgttgtcagggagaccgtaactactggaatgctgcttccttcaacacaccagcctcctac
ctgcacttccccaccttcaagggggagaacagcgcagacatctccttctattttaagact
tcatccacttacggcgtcttcctggagaacctgggcaacgctgacttcatccgacttgag
ctgaaatcgaccacgacggtctcgttctccttcgacgtggggaatgggcctgtggagctg
accgtgctctcggccacgcccctcaacgatgaccagtggcacagagtggaggcggagcgc
aatgtgaaggaggcggtgctacagcttgacggaaagtacaaggaggtgcgcctggccccg
ccccagggtcacacccgcctccagctcttcagccagctcttcgtgggtgcatcagggggt
caaagaggtttcctgggatgcattcgctccctgaagatgaatggagtgacccttgacctt
gaggagagggcaaaggttactccgggagtgaagcctggctgttcgggtcactgcagcagt
tacggaatgcactgccagaatgggggaaagtgcctggagaagtacaatggctattcctgt
gattgctccctgactgcatttgatggccctttctgcacagaagatgtcggtggctacttc
gagacaggcaccgtggtgcggtacgacctgatgtcaggctctggggcttctgctctgagg
gaggggaagggcgtcctgtctcccctgaccaccgaggccaacctgacccaggaggagctc
accttcagcttcagcacctccaacacccccagcgtgctcatttacatcagcgccaggaca
caggactacctggccgtggtgctgcgccacaacgggacccttcagatccgttataaccta
gggggactcaaggagcctttcaccgtcagtctggaccaccggaacatggccaacgggcaa
ccacacagtgtcaacatctccagacagcacaggatcatccacttacagctggatcattat
ccatcagtgagttacacattgccagaagcttcagacactgagttcaatctggtcaagaca
atattccttggaaaggtctttgaaacgggtcaaattgaccctgtgatcatcgagaagtac
aacaccccaggcttcgtaggctgtctctccagagtgcagttcaaccgtatagcccctctg
aaggcagccctgcgatcaggcatttcctcaaccgcctcagtccagggggtcctcgtggag
tctaactgtggggcgtctcctctcactatttcacccatgtctgctgcctttgatccctgg
cacccagattcagctggtgcccagttccctttcaatgaggagatggtgagcagagatggg
ctgaatcgtgactcggcgatcatcggggggatcatcgccgtggtaatcttcaccatcctg
tgcaccctggtgttcctggtgcgccacatgttccgccacaagggttcctaccacaccaat
gaggccaagggggccgaatcagcggactgtgctgacgccgccatcatcgtcaacgacccc
gccttcacagagactattgacgagagcaagaaggagtggttcatctag
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